RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 DDR1Q08345 913 aa23.42■■□□□ 1.34
CAPN5-207ENST00000533889 NARFQ9UHQ1 456 aa23.42■■□□□ 1.34
CAPN5-207ENST00000533889 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
CAPN5-207ENST00000533889 COL15A1P39059 1388 aa23.41■■□□□ 1.34
CAPN5-207ENST00000533889 C1QTNF8P60827 252 aa23.41■■□□□ 1.34
CAPN5-207ENST00000533889 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
CAPN5-207ENST00000533889 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
CAPN5-207ENST00000533889 UBR2Q8IWV8 1755 aa23.4■■□□□ 1.34
CAPN5-207ENST00000533889 BTBD11A6QL63 1104 aa23.4■■□□□ 1.34
CAPN5-207ENST00000533889 TM4SF1P30408 202 aa23.4■■□□□ 1.34
CAPN5-207ENST00000533889 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
CAPN5-207ENST00000533889 ATP10DQ9P241 1426 aa23.4■■□□□ 1.34
CAPN5-207ENST00000533889 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
CAPN5-207ENST00000533889 POLRMTO00411 1230 aaKnown RBP23.39■■□□□ 1.33
CAPN5-207ENST00000533889 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
CAPN5-207ENST00000533889 KIAA1551Q9HCM1 1747 aa23.38■■□□□ 1.33
CAPN5-207ENST00000533889 ARHGAP27Q6ZUM4 889 aa23.37■■□□□ 1.33
CAPN5-207ENST00000533889 PIM2Q9P1W9 311 aa23.37■■□□□ 1.33
CAPN5-207ENST00000533889 ZNF330Q9Y3S2 320 aaPredicted RBP23.37■■□□□ 1.33
CAPN5-207ENST00000533889 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
CAPN5-207ENST00000533889 A0A087WZG4 1122 aa23.36■■□□□ 1.33
CAPN5-207ENST00000533889 EIF5P55010 431 aaKnown RBP23.36■■□□□ 1.33
CAPN5-207ENST00000533889 NFIXQ14938 502 aa23.36■■□□□ 1.33
CAPN5-207ENST00000533889 MCM10Q7L590 875 aa23.36■■□□□ 1.33
CAPN5-207ENST00000533889 ZNF526Q8TF50 670 aaPredicted RBP23.36■■□□□ 1.33
CAPN5-207ENST00000533889 GPBP1L1Q9HC44 474 aaPredicted RBP23.36■■□□□ 1.33
CAPN5-207ENST00000533889 KCNQ3O43525 872 aa23.35■■□□□ 1.33
CAPN5-207ENST00000533889 NEFMP07197 916 aa23.35■■□□□ 1.33
CAPN5-207ENST00000533889 KCNA3P22001 575 aa23.35■■□□□ 1.33
CAPN5-207ENST00000533889 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
CAPN5-207ENST00000533889 BCL2L12Q9HB09 334 aa23.34■■□□□ 1.33
CAPN5-207ENST00000533889 CHRNA5P30532 468 aa23.33■■□□□ 1.33
CAPN5-207ENST00000533889 DCTN1Q14203 1278 aa23.33■■□□□ 1.33
CAPN5-207ENST00000533889 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
CAPN5-207ENST00000533889 ADCY9O60503 1353 aa23.32■■□□□ 1.32
CAPN5-207ENST00000533889 SENP3-EIF4A1A0A087X0R7 540 aa23.32■■□□□ 1.32
CAPN5-207ENST00000533889 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
CAPN5-207ENST00000533889 A1BGP04217 495 aa23.32■■□□□ 1.32
CAPN5-207ENST00000533889 SERPINB2P05120 415 aa23.32■■□□□ 1.32
CAPN5-207ENST00000533889 BICDL1Q6ZP65 573 aa23.32■■□□□ 1.32
CAPN5-207ENST00000533889 IL6STP40189 918 aaPredicted RBP23.31■■□□□ 1.32
CAPN5-207ENST00000533889 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
CAPN5-207ENST00000533889 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
CAPN5-207ENST00000533889 BRCA1P38398 1863 aaKnown RBP23.28■■□□□ 1.32
CAPN5-207ENST00000533889 AFDNP55196 1824 aaKnown RBP23.27■■□□□ 1.32
CAPN5-207ENST00000533889 SNRPA1P09661 255 aaKnown RBP23.27■■□□□ 1.32
CAPN5-207ENST00000533889 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
CAPN5-207ENST00000533889 TBC1D9BQ66K14 1250 aa23.27■■□□□ 1.32
CAPN5-207ENST00000533889 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
CAPN5-207ENST00000533889 PRAMEF22A3QJZ6 481 aa23.25■■□□□ 1.31
CAPN5-207ENST00000533889 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
CAPN5-207ENST00000533889 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
CAPN5-207ENST00000533889 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
CAPN5-207ENST00000533889 RALBP1Q15311 655 aa23.24■■□□□ 1.31
CAPN5-207ENST00000533889 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
CAPN5-207ENST00000533889 DZIP3Q86Y13 1208 aaKnown RBP23.23■■□□□ 1.31
CAPN5-207ENST00000533889 C2CD5Q86YS7 1000 aa23.23■■□□□ 1.31
CAPN5-207ENST00000533889 PLEKHF1Q96S99 279 aa23.23■■□□□ 1.31
CAPN5-207ENST00000533889 MAPK8IP3Q9UPT6 1336 aa23.23■■□□□ 1.31
CAPN5-207ENST00000533889 NRXN2Q9P2S2 1712 aa23.22■■□□□ 1.31
CAPN5-207ENST00000533889 H0YIN7 160 aa23.22■■□□□ 1.31
CAPN5-207ENST00000533889 NFE2L2Q16236 605 aa23.22■■□□□ 1.31
CAPN5-207ENST00000533889 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
CAPN5-207ENST00000533889 SETDB2Q96T68 719 aa23.22■■□□□ 1.31
CAPN5-207ENST00000533889 NPHP1O15259 732 aa23.21■■□□□ 1.31
CAPN5-207ENST00000533889 CAMTA2O94983 1202 aa23.21■■□□□ 1.31
CAPN5-207ENST00000533889 PNISRQ8TF01 805 aaKnown RBP23.21■■□□□ 1.31
CAPN5-207ENST00000533889 CARMIL3Q8ND23 1372 aa23.2■■□□□ 1.3
CAPN5-207ENST00000533889 TTLL6Q8N841 843 aa23.2■■□□□ 1.3
CAPN5-207ENST00000533889 CCDC24Q8N4L8 307 aa23.19■■□□□ 1.3
CAPN5-207ENST00000533889 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
CAPN5-207ENST00000533889 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
CAPN5-207ENST00000533889 PDE6BP35913 854 aa23.18■■□□□ 1.3
CAPN5-207ENST00000533889 PRR5LQ6MZQ0 368 aa23.18■■□□□ 1.3
CAPN5-207ENST00000533889 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
CAPN5-207ENST00000533889 BRIP1Q9BX63 1249 aa23.18■■□□□ 1.3
CAPN5-207ENST00000533889 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
CAPN5-207ENST00000533889 ZNF622Q969S3 477 aaKnown RBP eCLIP23.17■■□□□ 1.3
CAPN5-207ENST00000533889 ZNF652Q9Y2D9 606 aa23.17■■□□□ 1.3
CAPN5-207ENST00000533889 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
CAPN5-207ENST00000533889 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
CAPN5-207ENST00000533889 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
CAPN5-207ENST00000533889 CNBD1Q8NA66 436 aa23.16■■□□□ 1.3
CAPN5-207ENST00000533889 PDZRN3Q9UPQ7 1066 aa23.16■■□□□ 1.3
CAPN5-207ENST00000533889 KIF3CO14782 793 aa23.15■■□□□ 1.3
CAPN5-207ENST00000533889 CLEC4GQ6UXB4 293 aa23.15■■□□□ 1.3
CAPN5-207ENST00000533889 ST5P78524 1137 aa23.14■■□□□ 1.29
CAPN5-207ENST00000533889 RIPK4P57078 832 aa23.13■■□□□ 1.29
CAPN5-207ENST00000533889 NBPF5PQ86XG9 351 aaPredicted RBP23.13■■□□□ 1.29
CAPN5-207ENST00000533889 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
CAPN5-207ENST00000533889 DLEC1Q9Y238 1755 aa23.12■■□□□ 1.29
CAPN5-207ENST00000533889 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
CAPN5-207ENST00000533889 RASSF7Q02833 373 aa23.12■■□□□ 1.29
CAPN5-207ENST00000533889 NGEFQ8N5V2 710 aa23.12■■□□□ 1.29
CAPN5-207ENST00000533889 NMRK2Q9NPI5 230 aa23.12■■□□□ 1.29
CAPN5-207ENST00000533889 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
CAPN5-207ENST00000533889 ZNF219Q9P2Y4 722 aaPredicted RBP23.11■■□□□ 1.29
CAPN5-207ENST00000533889 ANKRD31Q8N7Z5 1873 aa23.11■■□□□ 1.29
CAPN5-207ENST00000533889 NIP7Q9Y221 180 aaKnown RBP eCLIP23.1■■□□□ 1.29
CAPN5-207ENST00000533889 RRP7AQ9Y3A4 280 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms