RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 RRS1Q15050 365 aaKnown RBP15.07■□□□□ 0
CSDE1-215ENST00000533818 C2CD5Q86YS7 1000 aa15.07■□□□□ 0
CSDE1-215ENST00000533818 RTL1A6NKG5 1358 aa15.07■□□□□ 0
CSDE1-215ENST00000533818 KDRP35968 1356 aa15.07■□□□□ 0
CSDE1-215ENST00000533818 H0YIN7 160 aa15.06■□□□□ 0
CSDE1-215ENST00000533818 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
CSDE1-215ENST00000533818 CYP4F22Q6NT55 531 aa15.06■□□□□ 0
CSDE1-215ENST00000533818 L3MBTL3Q96JM7 780 aaPredicted RBP15.06■□□□□ 0
CSDE1-215ENST00000533818 CCDC88AQ3V6T2 1871 aa15.06■□□□□ 0
CSDE1-215ENST00000533818 CA12O43570 354 aa15.05■□□□□ -0
CSDE1-215ENST00000533818 GCC1Q96CN9 775 aa15.05■□□□□ -0
CSDE1-215ENST00000533818 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
CSDE1-215ENST00000533818 C21orf2O43822 256 aa15.04■□□□□ -0
CSDE1-215ENST00000533818 HSP90AB2PQ58FF8 381 aa15.04■□□□□ -0
CSDE1-215ENST00000533818 A0A1W2PP64 1363 aa15.03■□□□□ -0
CSDE1-215ENST00000533818 MAP2K2P36507 400 aa15.03■□□□□ -0
CSDE1-215ENST00000533818 CRKLP46109 303 aaKnown RBP15.03■□□□□ -0
CSDE1-215ENST00000533818 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
CSDE1-215ENST00000533818 HACL1Q9UJ83 578 aa15.03■□□□□ -0
CSDE1-215ENST00000533818 AOC2O75106 756 aa15.02■□□□□ -0
CSDE1-215ENST00000533818 ZPR1O75312 459 aa15.02■□□□□ -0
CSDE1-215ENST00000533818 EPHX2P34913 555 aa15.02■□□□□ -0
CSDE1-215ENST00000533818 PNMA8AQ86V59 439 aaPredicted RBP15.02■□□□□ -0
CSDE1-215ENST00000533818 TAOK3Q9H2K8 898 aa15.02■□□□□ -0
CSDE1-215ENST00000533818 LTBP3Q9NS15 1303 aa15.01□□□□□ -0.01
CSDE1-215ENST00000533818 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
CSDE1-215ENST00000533818 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.01
CSDE1-215ENST00000533818 INSRP06213 1382 aa15□□□□□ -0.01
CSDE1-215ENST00000533818 SERPINB2P05120 415 aa15□□□□□ -0.01
CSDE1-215ENST00000533818 PHKG2P15735 406 aa15□□□□□ -0.01
CSDE1-215ENST00000533818 NFIXQ14938 502 aa15□□□□□ -0.01
CSDE1-215ENST00000533818 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
CSDE1-215ENST00000533818 HABP4Q5JVS0 413 aaKnown RBP14.99□□□□□ -0.01
CSDE1-215ENST00000533818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.018e-15■□□□□ 10.2
CSDE1-215ENST00000533818 THSD7BQ9C0I4 1608 aa14.99□□□□□ -0.01
CSDE1-215ENST00000533818 CASP8AP2Q9UKL3 1982 aa14.98□□□□□ -0.01
CSDE1-215ENST00000533818 PTCD1O75127 700 aaKnown RBP14.98□□□□□ -0.01
CSDE1-215ENST00000533818 NBPF15Q8N660 670 aa14.97□□□□□ -0.01
CSDE1-215ENST00000533818 LTBP1Q14766 1721 aa14.97□□□□□ -0.01
CSDE1-215ENST00000533818 SCN4AP35499 1836 aa14.96□□□□□ -0.01
CSDE1-215ENST00000533818 ERVV-2B6SEH9 535 aa14.96□□□□□ -0.01
CSDE1-215ENST00000533818 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.012e-19■□□□□ 8.5
CSDE1-215ENST00000533818 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.01
CSDE1-215ENST00000533818 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.02
CSDE1-215ENST00000533818 BRPF1P55201 1214 aaPredicted RBP14.95□□□□□ -0.02
CSDE1-215ENST00000533818 CST9Q5W186 159 aa14.95□□□□□ -0.02
CSDE1-215ENST00000533818 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
CSDE1-215ENST00000533818 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
CSDE1-215ENST00000533818 ZNF831Q5JPB2 1677 aa14.95□□□□□ -0.02
CSDE1-215ENST00000533818 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
CSDE1-215ENST00000533818 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
CSDE1-215ENST00000533818 FLT4P35916 1363 aa14.94□□□□□ -0.02
CSDE1-215ENST00000533818 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
CSDE1-215ENST00000533818 ZNF541Q9H0D2 1346 aa14.93□□□□□ -0.02
CSDE1-215ENST00000533818 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
CSDE1-215ENST00000533818 CARMIL3Q8ND23 1372 aa14.93□□□□□ -0.02
CSDE1-215ENST00000533818 DLEC1Q9Y238 1755 aa14.93□□□□□ -0.02
CSDE1-215ENST00000533818 DLL1O00548 723 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 PDE6BP35913 854 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 CABP4P57796 275 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 CIAPIN1Q6FI81 312 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 ADAMTSL1Q8N6G6 1762 aa14.92□□□□□ -0.02
CSDE1-215ENST00000533818 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
CSDE1-215ENST00000533818 TRAF5O00463 557 aa14.91□□□□□ -0.02
CSDE1-215ENST00000533818 SOGA3Q5TF21 947 aa14.91□□□□□ -0.02
CSDE1-215ENST00000533818 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
CSDE1-215ENST00000533818 FYB1O15117 783 aa14.9□□□□□ -0.02
CSDE1-215ENST00000533818 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
CSDE1-215ENST00000533818 KIF24Q5T7B8 1368 aa14.89□□□□□ -0.03
CSDE1-215ENST00000533818 BICDL1Q6ZP65 573 aa14.89□□□□□ -0.03
CSDE1-215ENST00000533818 SAPCD2Q86UD0 394 aa14.89□□□□□ -0.03
CSDE1-215ENST00000533818 CNKSR1Q969H4 720 aa14.89□□□□□ -0.03
CSDE1-215ENST00000533818 L3MBTL2Q969R5 705 aa14.89□□□□□ -0.03
CSDE1-215ENST00000533818 PUS7Q96PZ0 661 aaKnown RBP14.89□□□□□ -0.03
CSDE1-215ENST00000533818 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
CSDE1-215ENST00000533818 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
CSDE1-215ENST00000533818 SOS1Q07889 1333 aaPredicted RBP14.89□□□□□ -0.03
CSDE1-215ENST00000533818 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
CSDE1-215ENST00000533818 PRPF40BQ6NWY9 871 aaKnown RBP14.88□□□□□ -0.03
CSDE1-215ENST00000533818 EYA1Q99502 592 aa14.88□□□□□ -0.03
CSDE1-215ENST00000533818 NCAPD2Q15021 1401 aa14.88□□□□□ -0.03
CSDE1-215ENST00000533818 NRXN2Q9P2S2 1712 aa14.88□□□□□ -0.03
CSDE1-215ENST00000533818 FXR1P51114 621 aaKnown RBP eCLIP14.87□□□□□ -0.03
CSDE1-215ENST00000533818 GPC2Q8N158 579 aa14.87□□□□□ -0.03
CSDE1-215ENST00000533818 CCDC24Q8N4L8 307 aa14.87□□□□□ -0.03
CSDE1-215ENST00000533818 HHIPL1Q96JK4 782 aa14.87□□□□□ -0.03
CSDE1-215ENST00000533818 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
CSDE1-215ENST00000533818 PPM1GO15355 546 aaPredicted RBP14.86□□□□□ -0.03
CSDE1-215ENST00000533818 LMOD1P29536 600 aaPredicted RBP14.85□□□□□ -0.03
CSDE1-215ENST00000533818 STYK1Q6J9G0 422 aa14.85□□□□□ -0.03
CSDE1-215ENST00000533818 DNAJC10Q8IXB1 793 aa14.85□□□□□ -0.03
CSDE1-215ENST00000533818 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
CSDE1-215ENST00000533818 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
CSDE1-215ENST00000533818 FZD9O00144 591 aa14.84□□□□□ -0.03
CSDE1-215ENST00000533818 CELF2O95319 508 aaKnown RBP14.84□□□□□ -0.03
CSDE1-215ENST00000533818 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
CSDE1-215ENST00000533818 NOGQ13253 232 aa14.84□□□□□ -0.03
CSDE1-215ENST00000533818 CCDC93Q567U6 631 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms