RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ZNF521Q96K83 1311 aa14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 PCDH11XQ9BZA7 1347 aa14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 PCDH11YQ9BZA8 1340 aa14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 WWC1Q8IX03 1113 aa14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 DDX54Q8TDD1 881 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 PHACTR3Q96KR7 559 aa14.24□□□□□ -0.13
CCDC90B-218ENST00000533761 TNS2Q63HR2 1409 aa14.23□□□□□ -0.13
CCDC90B-218ENST00000533761 NEFLP07196 543 aa14.23□□□□□ -0.13
CCDC90B-218ENST00000533761 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
CCDC90B-218ENST00000533761 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
CCDC90B-218ENST00000533761 GAS2L2Q8NHY3 880 aa14.23□□□□□ -0.13
CCDC90B-218ENST00000533761 RIPK4P57078 832 aa14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 C1orf141Q5JVX7 400 aa14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 MYH16Q9H6N6 1097 aa14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 RGS12O14924 1447 aa14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 ZNF530Q6P9A1 599 aaPredicted RBP14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 IFNL2Q8IZJ0 200 aa14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 LRRC37A3O60309 1634 aa14.22□□□□□ -0.13
CCDC90B-218ENST00000533761 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.13
CCDC90B-218ENST00000533761 IL16Q14005 1332 aa14.21□□□□□ -0.13
CCDC90B-218ENST00000533761 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.14
CCDC90B-218ENST00000533761 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.14
CCDC90B-218ENST00000533761 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
CCDC90B-218ENST00000533761 CYP27B1O15528 508 aa14.2□□□□□ -0.14
CCDC90B-218ENST00000533761 HSP90AB1P08238 724 aaKnown RBP14.2□□□□□ -0.14
CCDC90B-218ENST00000533761 PHKG2P15735 406 aa14.2□□□□□ -0.14
CCDC90B-218ENST00000533761 MARCH10Q8NA82 808 aaPredicted RBP14.2□□□□□ -0.14
CCDC90B-218ENST00000533761 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
CCDC90B-218ENST00000533761 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
CCDC90B-218ENST00000533761 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
CCDC90B-218ENST00000533761 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-218ENST00000533761 BRWD3Q6RI45 1802 aa14.18□□□□□ -0.14
CCDC90B-218ENST00000533761 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-218ENST00000533761 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
CCDC90B-218ENST00000533761 DCAF5Q96JK2 942 aa14.17□□□□□ -0.14
CCDC90B-218ENST00000533761 HTATSF1O43719 755 aaKnown RBP14.17□□□□□ -0.14
CCDC90B-218ENST00000533761 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
CCDC90B-218ENST00000533761 SHANK3Q9BYB0 1731 aa14.16□□□□□ -0.14
CCDC90B-218ENST00000533761 FAM182BQ5T319 152 aa14.16□□□□□ -0.14
CCDC90B-218ENST00000533761 CDCA7LQ96GN5 454 aa14.16□□□□□ -0.14
CCDC90B-218ENST00000533761 MAP3K5Q99683 1374 aa14.16□□□□□ -0.14
CCDC90B-218ENST00000533761 CT47B1P0C2W7 299 aaPredicted RBP14.15□□□□□ -0.14
CCDC90B-218ENST00000533761 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
CCDC90B-218ENST00000533761 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
CCDC90B-218ENST00000533761 BCL9O00512 1426 aa14.15□□□□□ -0.14
CCDC90B-218ENST00000533761 GNAI1P63096 354 aa14.14□□□□□ -0.15
CCDC90B-218ENST00000533761 RCAN3Q9UKA8 241 aa14.14□□□□□ -0.15
CCDC90B-218ENST00000533761 TRMT2AQ8IZ69 625 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-218ENST00000533761 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
CCDC90B-218ENST00000533761 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
CCDC90B-218ENST00000533761 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
CCDC90B-218ENST00000533761 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
CCDC90B-218ENST00000533761 RNMTO43148 476 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-218ENST00000533761 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.12□□□□□ -0.15
CCDC90B-218ENST00000533761 IL17REQ8NFR9 667 aa14.12□□□□□ -0.15
CCDC90B-218ENST00000533761 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
CCDC90B-218ENST00000533761 LGR6Q9HBX8 967 aa14.12□□□□□ -0.15
CCDC90B-218ENST00000533761 SUPT16HQ9Y5B9 1047 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-218ENST00000533761 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 CABP4P57796 275 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 TEFQ10587 303 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 MCM10Q7L590 875 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 EP400Q96L91 3159 aa14.11□□□□□ -0.15
CCDC90B-218ENST00000533761 KDM6AO15550 1401 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-218ENST00000533761 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
CCDC90B-218ENST00000533761 ACSBG1Q96GR2 724 aa14.1□□□□□ -0.15
CCDC90B-218ENST00000533761 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
CCDC90B-218ENST00000533761 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
CCDC90B-218ENST00000533761 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
CCDC90B-218ENST00000533761 NUDT7P0C024 238 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 DCTN1Q14203 1278 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 SLC52A2Q9HAB3 445 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 SCN11AQ9UI33 1791 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 TRIM37O94972 964 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 BABAM1Q9NWV8 329 aa14.09□□□□□ -0.15
CCDC90B-218ENST00000533761 FANCIQ9NVI1 1328 aa14.08□□□□□ -0.15
CCDC90B-218ENST00000533761 KCNQ2O43526 872 aa14.08□□□□□ -0.16
CCDC90B-218ENST00000533761 RGS20O76081 388 aa14.08□□□□□ -0.16
CCDC90B-218ENST00000533761 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
CCDC90B-218ENST00000533761 LHX6Q9UPM6 363 aa14.08□□□□□ -0.16
CCDC90B-218ENST00000533761 ADAMTS7Q9UKP4 1686 aa14.07□□□□□ -0.16
CCDC90B-218ENST00000533761 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-218ENST00000533761 CCDC125Q86Z20 511 aa14.07□□□□□ -0.16
CCDC90B-218ENST00000533761 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
CCDC90B-218ENST00000533761 DOT1LQ8TEK3 1739 aa14.07□□□□□ -0.16
CCDC90B-218ENST00000533761 SBF2Q86WG5 1849 aa14.07□□□□□ -0.16
CCDC90B-218ENST00000533761 PIGBQ92521 554 aa14.06□□□□□ -0.16
CCDC90B-218ENST00000533761 THUMPD2Q9BTF0 503 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-218ENST00000533761 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-218ENST00000533761 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms