RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 PLEKHG2Q9H7P9 1386 aa23.69■■□□□ 1.38
UBXN1-215ENST00000533476 RAB11FIP3O75154 756 aa23.69■■□□□ 1.38
UBXN1-215ENST00000533476 SCN11AQ9UI33 1791 aa23.69■■□□□ 1.38
UBXN1-215ENST00000533476 PPP1R42Q7Z4L9 355 aa23.69■■□□□ 1.38
UBXN1-215ENST00000533476 TNS3Q68CZ2 1445 aa23.68■■□□□ 1.38
UBXN1-215ENST00000533476 NPHP3Q7Z494 1330 aa23.67■■□□□ 1.38
UBXN1-215ENST00000533476 ANXA1P04083 346 aa23.67■■□□□ 1.38
UBXN1-215ENST00000533476 NBPF7P0C2Y1 421 aaPredicted RBP23.67■■□□□ 1.38
UBXN1-215ENST00000533476 RAPGEF4Q8WZA2 1011 aa23.67■■□□□ 1.38
UBXN1-215ENST00000533476 HSP90AA1P07900 732 aaKnown RBP23.66■■□□□ 1.38
UBXN1-215ENST00000533476 TSHZ3Q63HK5 1081 aa23.66■■□□□ 1.38
UBXN1-215ENST00000533476 CADPS2Q86UW7 1296 aa23.66■■□□□ 1.38
UBXN1-215ENST00000533476 ALDH1L1O75891 902 aa23.65■■□□□ 1.38
UBXN1-215ENST00000533476 KDM6AO15550 1401 aaPredicted RBP23.65■■□□□ 1.38
UBXN1-215ENST00000533476 RAB3GAP1Q15042 981 aa23.65■■□□□ 1.38
UBXN1-215ENST00000533476 NLRP2Q9NX02 1062 aa23.65■■□□□ 1.38
UBXN1-215ENST00000533476 HYPKQ9NX55 129 aa23.65■■□□□ 1.38
UBXN1-215ENST00000533476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.65■■□□□ 1.38
UBXN1-215ENST00000533476 MEGF6O75095 1541 aa23.64■■□□□ 1.37
UBXN1-215ENST00000533476 DDX11L8A8MPP1 907 aa23.64■■□□□ 1.37
UBXN1-215ENST00000533476 SRGAP3O43295 1099 aa23.64■■□□□ 1.37
UBXN1-215ENST00000533476 KSR2Q6VAB6 950 aa23.64■■□□□ 1.37
UBXN1-215ENST00000533476 DDX17Q92841 729 aaKnown RBP23.64■■□□□ 1.37
UBXN1-215ENST00000533476 SURF6O75683 361 aaKnown RBP23.63■■□□□ 1.37
UBXN1-215ENST00000533476 TATP17735 454 aaPredicted RBP23.63■■□□□ 1.37
UBXN1-215ENST00000533476 PROSER3Q2NL68 480 aa23.63■■□□□ 1.37
UBXN1-215ENST00000533476 BRPF3Q9ULD4 1205 aa23.63■■□□□ 1.37
UBXN1-215ENST00000533476 MTX1Q13505 466 aa23.63■■□□□ 1.37
UBXN1-215ENST00000533476 ESYT1Q9BSJ8 1104 aa23.63■■□□□ 1.37
UBXN1-215ENST00000533476 SPG7Q9UQ90 795 aa23.63■■□□□ 1.37
UBXN1-215ENST00000533476 MAP3K2Q9Y2U5 619 aa23.63■■□□□ 1.37
UBXN1-215ENST00000533476 RHPN1Q8TCX5 695 aa23.62■■□□□ 1.37
UBXN1-215ENST00000533476 KIF1BPQ96EK5 621 aa23.62■■□□□ 1.37
UBXN1-215ENST00000533476 MRC1P22897 1456 aa23.62■■□□□ 1.37
UBXN1-215ENST00000533476 C5P01031 1676 aa23.62■■□□□ 1.37
UBXN1-215ENST00000533476 TNPO1Q92973 898 aaKnown RBP23.61■■□□□ 1.37
UBXN1-215ENST00000533476 PKD1L3Q7Z443 1732 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 PRAMEF22A3QJZ6 481 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 PHKG2P15735 406 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 CHMLP26374 656 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 HSP90AB4PQ58FF6 505 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 L1TD1Q5T7N2 865 aaKnown RBP23.61■■□□□ 1.37
UBXN1-215ENST00000533476 SLC52A2Q9HAB3 445 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 IL1RAPL2Q9NP60 686 aa23.61■■□□□ 1.37
UBXN1-215ENST00000533476 DDX21Q9NR30 783 aaKnown RBP eCLIP23.61■■□□□ 1.37
UBXN1-215ENST00000533476 CPDO75976 1380 aa23.6■■□□□ 1.37
UBXN1-215ENST00000533476 ST18O60284 1047 aa23.59■■□□□ 1.37
UBXN1-215ENST00000533476 ZNF790Q6PG37 636 aa23.59■■□□□ 1.37
UBXN1-215ENST00000533476 HDAC5Q9UQL6 1122 aa23.59■■□□□ 1.37
UBXN1-215ENST00000533476 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
UBXN1-215ENST00000533476 TRIM6-TRIM34B2RNG4 842 aa23.59■■□□□ 1.37
UBXN1-215ENST00000533476 GBP4Q96PP9 640 aa23.59■■□□□ 1.37
UBXN1-215ENST00000533476 XIRP1Q702N8 1843 aaKnown RBP23.58■■□□□ 1.37
UBXN1-215ENST00000533476 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.37
UBXN1-215ENST00000533476 RILPL2Q969X0 211 aa23.58■■□□□ 1.37
UBXN1-215ENST00000533476 FOXD4L1Q9NU39 408 aa23.58■■□□□ 1.37
UBXN1-215ENST00000533476 CSB-PGBD3P0DP91 1061 aa23.57■■□□□ 1.36
UBXN1-215ENST00000533476 PDIA6Q15084 440 aa23.57■■□□□ 1.36
UBXN1-215ENST00000533476 NUTM1Q86Y26 1132 aa23.57■■□□□ 1.36
UBXN1-215ENST00000533476 IFNL2Q8IZJ0 200 aa23.57■■□□□ 1.36
UBXN1-215ENST00000533476 LINS1Q8NG48 757 aa23.57■■□□□ 1.36
UBXN1-215ENST00000533476 C9orf78Q9NZ63 289 aaPredicted RBP23.57■■□□□ 1.36
UBXN1-215ENST00000533476 TRAK2O60296 914 aa23.56■■□□□ 1.36
UBXN1-215ENST00000533476 PI4K2BQ8TCG2 481 aa23.56■■□□□ 1.36
UBXN1-215ENST00000533476 CABLES1Q8TDN4 633 aa23.56■■□□□ 1.36
UBXN1-215ENST00000533476 UTYO14607 1347 aa23.56■■□□□ 1.36
UBXN1-215ENST00000533476 AK9Q5TCS8 1911 aa23.55■■□□□ 1.36
UBXN1-215ENST00000533476 UNC5CLQ8IV45 518 aa23.55■■□□□ 1.36
UBXN1-215ENST00000533476 USP42Q9H9J4 1324 aaKnown RBP23.55■■□□□ 1.36
UBXN1-215ENST00000533476 PARP4Q9UKK3 1724 aaKnown RBP23.55■■□□□ 1.36
UBXN1-215ENST00000533476 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
UBXN1-215ENST00000533476 MCCP23508 829 aa23.55■■□□□ 1.36
UBXN1-215ENST00000533476 EPB41L2O43491 1005 aaKnown RBP23.54■■□□□ 1.36
UBXN1-215ENST00000533476 PTMSP20962 102 aa23.54■■□□□ 1.36
UBXN1-215ENST00000533476 ANAPC15P60006 121 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 SLC39A6Q13433 755 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 IL17RAQ96F46 866 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 DCAF5Q96JK2 942 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 CHRNA2Q15822 529 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 CWF19L2Q2TBE0 894 aaKnown RBP23.53■■□□□ 1.36
UBXN1-215ENST00000533476 CLEC17AQ6ZS10 378 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 NFATC2IPQ8NCF5 419 aa23.53■■□□□ 1.36
UBXN1-215ENST00000533476 GRM8O00222 908 aa23.51■■□□□ 1.35
UBXN1-215ENST00000533476 TTC41PQ6P2S7 1318 aa23.51■■□□□ 1.35
UBXN1-215ENST00000533476 ERC1Q8IUD2 1116 aa23.51■■□□□ 1.35
UBXN1-215ENST00000533476 CWC22Q9HCG8 908 aaKnown RBP23.51■■□□□ 1.35
UBXN1-215ENST00000533476 ANO2Q9NQ90 1003 aa23.51■■□□□ 1.35
UBXN1-215ENST00000533476 CYP27B1O15528 508 aa23.5■■□□□ 1.35
UBXN1-215ENST00000533476 SSFA2P28290 1259 aa23.5■■□□□ 1.35
UBXN1-215ENST00000533476 OS9Q13438 667 aaPredicted RBP23.5■■□□□ 1.35
UBXN1-215ENST00000533476 FSD2A1L4K1 749 aa23.49■■□□□ 1.35
UBXN1-215ENST00000533476 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
UBXN1-215ENST00000533476 NUCB2P80303 420 aa23.49■■□□□ 1.35
UBXN1-215ENST00000533476 AIMP1Q12904 312 aaKnown RBP23.49■■□□□ 1.35
UBXN1-215ENST00000533476 ZNF496Q96IT1 587 aaPredicted RBP23.49■■□□□ 1.35
UBXN1-215ENST00000533476 BRINP3Q76B58 766 aa23.48■■□□□ 1.35
UBXN1-215ENST00000533476 CNTROBQ8N137 903 aa23.48■■□□□ 1.35
UBXN1-215ENST00000533476 SUCLG2Q96I99 432 aa23.48■■□□□ 1.35
UBXN1-215ENST00000533476 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 GLI3P10071 1580 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms