RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 DDX58O95786 925 aaKnown RBP27.25■■□□□ 1.95
AP004608.1-202ENST00000533390 UBTFL1P0CB47 393 aaPredicted RBP27.25■■□□□ 1.95
AP004608.1-202ENST00000533390 KSR2Q6VAB6 950 aa27.25■■□□□ 1.95
AP004608.1-202ENST00000533390 BEND3Q5T5X7 828 aa27.24■■□□□ 1.95
AP004608.1-202ENST00000533390 USP44Q9H0E7 712 aa27.24■■□□□ 1.95
AP004608.1-202ENST00000533390 UBR2Q8IWV8 1755 aa27.24■■□□□ 1.95
AP004608.1-202ENST00000533390 ADAMTS2O95450 1211 aa27.23■■□□□ 1.95
AP004608.1-202ENST00000533390 WNK3Q9BYP7 1800 aa27.23■■□□□ 1.95
AP004608.1-202ENST00000533390 PDIA6Q15084 440 aa27.23■■□□□ 1.95
AP004608.1-202ENST00000533390 MAP3K2Q9Y2U5 619 aa27.23■■□□□ 1.95
AP004608.1-202ENST00000533390 DISP2A7MBM2 1401 aa27.23■■□□□ 1.95
AP004608.1-202ENST00000533390 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
AP004608.1-202ENST00000533390 UBAP1LF5GYI3 381 aa27.21■■□□□ 1.95
AP004608.1-202ENST00000533390 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
AP004608.1-202ENST00000533390 USP16Q9Y5T5 823 aa27.21■■□□□ 1.95
AP004608.1-202ENST00000533390 LRRFIP2Q9Y608 721 aaKnown RBP27.21■■□□□ 1.95
AP004608.1-202ENST00000533390 NRAPQ86VF7 1730 aa27.2■■□□□ 1.95
AP004608.1-202ENST00000533390 GLI3P10071 1580 aa27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 MYL6BP14649 208 aa27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 AIMP1Q12904 312 aaKnown RBP27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 NUTM2BA6NNL0 878 aaPredicted RBP27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 NUTM2EB1AL46 878 aaPredicted RBP27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 ALDH1L1O75891 902 aa27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 ATP8B2P98198 1209 aa27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 NUTM2AQ8IVF1 878 aaPredicted RBP27.19■■□□□ 1.94
AP004608.1-202ENST00000533390 IPO9Q96P70 1041 aaKnown RBP27.18■■□□□ 1.94
AP004608.1-202ENST00000533390 TMOD3Q9NYL9 352 aa27.18■■□□□ 1.94
AP004608.1-202ENST00000533390 NWD2Q9ULI1 1742 aa27.16■■□□□ 1.94
AP004608.1-202ENST00000533390 EXOC5O00471 708 aa27.16■■□□□ 1.94
AP004608.1-202ENST00000533390 RIC3Q7Z5B4 369 aa27.16■■□□□ 1.94
AP004608.1-202ENST00000533390 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
AP004608.1-202ENST00000533390 CDCA7Q9BWT1 371 aaPredicted RBP27.15■■□□□ 1.94
AP004608.1-202ENST00000533390 XAGE3Q8WTP9 111 aa27.15■■□□□ 1.94
AP004608.1-202ENST00000533390 HDAC5Q9UQL6 1122 aa27.15■■□□□ 1.94
AP004608.1-202ENST00000533390 ITGB4P16144 1822 aa27.15■■□□□ 1.94
AP004608.1-202ENST00000533390 ERBB4Q15303 1308 aa27.14■■□□□ 1.94
AP004608.1-202ENST00000533390 COPS6Q7L5N1 327 aa27.14■■□□□ 1.94
AP004608.1-202ENST00000533390 LINS1Q8NG48 757 aa27.14■■□□□ 1.94
AP004608.1-202ENST00000533390 THRAP3Q9Y2W1 955 aaKnown RBP27.14■■□□□ 1.94
AP004608.1-202ENST00000533390 C9orf78Q9NZ63 289 aaPredicted RBP27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 TNS2Q63HR2 1409 aa27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 PNMA6EA0A0J9YXQ4 647 aa27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 MSH5O43196 834 aa27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 NBPF7P0C2Y1 421 aaPredicted RBP27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 NEXNQ0ZGT2 675 aa27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 BMP2KLQ5H9B9 411 aa27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 UPF2Q9HAU5 1272 aaKnown RBP27.13■■□□□ 1.93
AP004608.1-202ENST00000533390 LRP6O75581 1613 aa27.12■■□□□ 1.93
AP004608.1-202ENST00000533390 APBB1O00213 710 aa27.12■■□□□ 1.93
AP004608.1-202ENST00000533390 SPATA31A1Q5TZJ5 1347 aa27.12■■□□□ 1.93
AP004608.1-202ENST00000533390 PTCD1O75127 700 aaKnown RBP27.1■■□□□ 1.93
AP004608.1-202ENST00000533390 LRP10Q7Z4F1 713 aa27.1■■□□□ 1.93
AP004608.1-202ENST00000533390 DDRGK1Q96HY6 314 aa27.1■■□□□ 1.93
AP004608.1-202ENST00000533390 CWF19L2Q2TBE0 894 aaKnown RBP27.09■■□□□ 1.93
AP004608.1-202ENST00000533390 ANKRD13DQ6ZTN6 518 aa27.09■■□□□ 1.93
AP004608.1-202ENST00000533390 SEC24BO95487 1268 aa27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 PIP4K2AP48426 406 aaPredicted RBP27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 PLEKHM2Q8IWE5 1019 aa27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 SSH3Q8TE77 659 aa27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 BCL11AQ9H165 835 aa27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 EXOC6BQ9Y2D4 811 aa27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 SLIT2O94813 1529 aa27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 METTL22Q9BUU2 404 aaPredicted RBP27.08■■□□□ 1.93
AP004608.1-202ENST00000533390 KAT6BQ8WYB5 2073 aa27.08■■□□□ 1.92
AP004608.1-202ENST00000533390 SMARCA5O60264 1052 aaPredicted RBP27.07■■□□□ 1.92
AP004608.1-202ENST00000533390 PPP1R42Q7Z4L9 355 aa27.07■■□□□ 1.92
AP004608.1-202ENST00000533390 ARFGEF2Q9Y6D5 1785 aa27.07■■□□□ 1.92
AP004608.1-202ENST00000533390 PIGBQ92521 554 aa27.06■■□□□ 1.92
AP004608.1-202ENST00000533390 IBTKQ9P2D0 1353 aaPredicted RBP27.06■■□□□ 1.92
AP004608.1-202ENST00000533390 ERICH6Q7L0X2 663 aa27.06■■□□□ 1.92
AP004608.1-202ENST00000533390 LRRCC1Q9C099 1032 aa27.06■■□□□ 1.92
AP004608.1-202ENST00000533390 CCDC9Q9Y3X0 531 aaKnown RBP27.06■■□□□ 1.92
AP004608.1-202ENST00000533390 JCADQ9P266 1359 aa27.06■■□□□ 1.92
AP004608.1-202ENST00000533390 GRM8O00222 908 aa27.05■■□□□ 1.92
AP004608.1-202ENST00000533390 AFDNP55196 1824 aaKnown RBP27.05■■□□□ 1.92
AP004608.1-202ENST00000533390 C16orf71Q8IYS4 520 aaPredicted RBP27.05■■□□□ 1.92
AP004608.1-202ENST00000533390 MYD88Q99836 296 aa27.05■■□□□ 1.92
AP004608.1-202ENST00000533390 SPATA31A5Q5VU36 1347 aa27.04■■□□□ 1.92
AP004608.1-202ENST00000533390 SPATA31A7Q8IWB4 1347 aa27.04■■□□□ 1.92
AP004608.1-202ENST00000533390 SRGAP3O43295 1099 aa27.04■■□□□ 1.92
AP004608.1-202ENST00000533390 POLA2Q14181 598 aa27.04■■□□□ 1.92
AP004608.1-202ENST00000533390 DDB1Q16531 1140 aa27.04■■□□□ 1.92
AP004608.1-202ENST00000533390 TEX13AQ9BXU3 409 aaPredicted RBP27.04■■□□□ 1.92
AP004608.1-202ENST00000533390 UTYO14607 1347 aa27.03■■□□□ 1.92
AP004608.1-202ENST00000533390 IGKV5-2P06315 115 aa27.03■■□□□ 1.92
AP004608.1-202ENST00000533390 PLBD2Q8NHP8 589 aa27.03■■□□□ 1.92
AP004608.1-202ENST00000533390 NOP58Q9Y2X3 529 aaKnown RBP27.03■■□□□ 1.92
AP004608.1-202ENST00000533390 NEURL1BA8MQ27 555 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 NBPF26B4DH59 902 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 NBPF14Q5TI25 921 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 NBPF10Q6P3W6 841 aaKnown RBP27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 VSIG10Q8N0Z9 540 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 NBPF15Q8N660 670 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 ASAP1Q9ULH1 1129 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 DOT1LQ8TEK3 1739 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 BCL9O00512 1426 aa27.02■■□□□ 1.92
AP004608.1-202ENST00000533390 RAB11FIP3O75154 756 aa27.01■■□□□ 1.91
AP004608.1-202ENST00000533390 MTX1Q13505 466 aa27.01■■□□□ 1.91
AP004608.1-202ENST00000533390 TTC22Q5TAA0 569 aa27.01■■□□□ 1.91
AP004608.1-202ENST00000533390 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms