RNA–Protein interactions for RNA: ENST00000533124.5

C11orf49-220, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-220ENST00000533124 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
C11orf49-220ENST00000533124 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
C11orf49-220ENST00000533124 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
C11orf49-220ENST00000533124 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
C11orf49-220ENST00000533124 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
C11orf49-220ENST00000533124 NRXN2Q9P2S2 1712 aa17.49■□□□□ 0.39
C11orf49-220ENST00000533124 SENP3-EIF4A1A0A087X0R7 540 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
C11orf49-220ENST00000533124 KCNA3P22001 575 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 TM4SF1P30408 202 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
C11orf49-220ENST00000533124 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
C11orf49-220ENST00000533124 ZNF526Q8TF50 670 aaPredicted RBP17.47■□□□□ 0.39
C11orf49-220ENST00000533124 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
C11orf49-220ENST00000533124 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
C11orf49-220ENST00000533124 FCHSD2O94868 740 aa17.46■□□□□ 0.39
C11orf49-220ENST00000533124 STARD3NLO95772 234 aa17.46■□□□□ 0.39
C11orf49-220ENST00000533124 U2AF1L5P0DN76 240 aaPredicted RBP17.46■□□□□ 0.39
C11orf49-220ENST00000533124 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
C11orf49-220ENST00000533124 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.39
C11orf49-220ENST00000533124 DLG5Q8TDM6 1919 aa17.46■□□□□ 0.39
C11orf49-220ENST00000533124 SBF1O95248 1867 aa17.46■□□□□ 0.38
C11orf49-220ENST00000533124 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
C11orf49-220ENST00000533124 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
C11orf49-220ENST00000533124 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
C11orf49-220ENST00000533124 NFIXQ14938 502 aa17.44■□□□□ 0.38
C11orf49-220ENST00000533124 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
C11orf49-220ENST00000533124 BCL2L12Q9HB09 334 aa17.44■□□□□ 0.38
C11orf49-220ENST00000533124 CHRNA5P30532 468 aa17.43■□□□□ 0.38
C11orf49-220ENST00000533124 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
C11orf49-220ENST00000533124 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
C11orf49-220ENST00000533124 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
C11orf49-220ENST00000533124 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
C11orf49-220ENST00000533124 KCNQ3O43525 872 aa17.42■□□□□ 0.38
C11orf49-220ENST00000533124 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
C11orf49-220ENST00000533124 A0A087WZG4 1122 aa17.41■□□□□ 0.38
C11orf49-220ENST00000533124 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
C11orf49-220ENST00000533124 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
C11orf49-220ENST00000533124 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
C11orf49-220ENST00000533124 SERPINB2P05120 415 aa17.4■□□□□ 0.38
C11orf49-220ENST00000533124 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
C11orf49-220ENST00000533124 A1BGP04217 495 aa17.39■□□□□ 0.37
C11orf49-220ENST00000533124 MCM10Q7L590 875 aa17.39■□□□□ 0.37
C11orf49-220ENST00000533124 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
C11orf49-220ENST00000533124 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
C11orf49-220ENST00000533124 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
C11orf49-220ENST00000533124 TBC1D2BQ9UPU7 963 aa17.38■□□□□ 0.37
C11orf49-220ENST00000533124 KIF3CO14782 793 aa17.37■□□□□ 0.37
C11orf49-220ENST00000533124 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
C11orf49-220ENST00000533124 C9orf131Q5VYM1 1079 aa17.37■□□□□ 0.37
C11orf49-220ENST00000533124 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
C11orf49-220ENST00000533124 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
C11orf49-220ENST00000533124 CACNA1SQ13698 1873 aa17.36■□□□□ 0.37
C11orf49-220ENST00000533124 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
C11orf49-220ENST00000533124 USP16Q9Y5T5 823 aa17.36■□□□□ 0.37
C11orf49-220ENST00000533124 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
C11orf49-220ENST00000533124 LAMB4A4D0S4 1761 aa17.35■□□□□ 0.37
C11orf49-220ENST00000533124 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
C11orf49-220ENST00000533124 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
C11orf49-220ENST00000533124 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
C11orf49-220ENST00000533124 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
C11orf49-220ENST00000533124 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
C11orf49-220ENST00000533124 CAMTA2O94983 1202 aa17.33■□□□□ 0.36
C11orf49-220ENST00000533124 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
C11orf49-220ENST00000533124 RNF181Q9P0P0 153 aa17.33■□□□□ 0.36
C11orf49-220ENST00000533124 H0YIN7 160 aa17.32■□□□□ 0.36
C11orf49-220ENST00000533124 NEFMP07197 916 aa17.32■□□□□ 0.36
C11orf49-220ENST00000533124 DZIP3Q86Y13 1208 aaKnown RBP17.32■□□□□ 0.36
C11orf49-220ENST00000533124 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
C11orf49-220ENST00000533124 HSPA6P17066 643 aa17.31■□□□□ 0.36
C11orf49-220ENST00000533124 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
C11orf49-220ENST00000533124 PRR5LQ6MZQ0 368 aa17.31■□□□□ 0.36
C11orf49-220ENST00000533124 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
C11orf49-220ENST00000533124 NMRK2Q9NPI5 230 aa17.31■□□□□ 0.36
C11orf49-220ENST00000533124 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
C11orf49-220ENST00000533124 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
C11orf49-220ENST00000533124 DICER1Q9UPY3 1922 aaKnown RBP17.3■□□□□ 0.36
C11orf49-220ENST00000533124 RASSF7Q02833 373 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 BRIP1Q9BX63 1249 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
C11orf49-220ENST00000533124 PDE6BP35913 854 aa17.29■□□□□ 0.36
C11orf49-220ENST00000533124 NUP98P52948 1817 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 TOMM70O94826 608 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
C11orf49-220ENST00000533124 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
C11orf49-220ENST00000533124 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
C11orf49-220ENST00000533124 NPHP1O15259 732 aa17.27■□□□□ 0.36
C11orf49-220ENST00000533124 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms