RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PRO3102Q9H379 93 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 MYT1LQ9UL68 1186 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 GYS1P13807 737 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 NUTM2GQ5VZR2 741 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 TRPM4Q8TD43 1214 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 DCAF5Q96JK2 942 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 PRDM11Q9NQV5 511 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 TEX15Q9BXT5 2789 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 NBPF19A0A087WUL8 3843 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 PLXNB2O15031 1838 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 INTS5Q6P9B9 1019 aaKnown RBP2.78□□□□□ -1.96
KNL1-211ENST00000533001 ATF5Q9Y2D1 282 aaPredicted RBP2.78□□□□□ -1.96
KNL1-211ENST00000533001 PHIPQ8WWQ0 1821 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 SLC16A10Q8TF71 515 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 CABP2Q9NPB3 220 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 CENPEQ02224 2701 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 IGSF1Q8N6C5 1336 aa2.78□□□□□ -1.96
KNL1-211ENST00000533001 HSP90AB2PQ58FF8 381 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 PPARGC1BQ86YN6 1023 aaKnown RBP2.77□□□□□ -1.97
KNL1-211ENST00000533001 STAC3Q96MF2 364 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 SPTBN2O15020 2390 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 KIF24Q5T7B8 1368 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 IP6K1Q92551 441 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 ATG3Q9NT62 314 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 ZC3H4Q9UPT8 1303 aaKnown RBP2.77□□□□□ -1.97
KNL1-211ENST00000533001 OTOGQ6ZRI0 2925 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 ADGRG4Q8IZF6 3080 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 HDGFP51858 240 aaKnown RBP2.77□□□□□ -1.97
KNL1-211ENST00000533001 RTL1A6NKG5 1358 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 RBM42Q9BTD8 480 aaKnown RBP2.77□□□□□ -1.97
KNL1-211ENST00000533001 HOXC9P31274 260 aa2.77□□□□□ -1.97
KNL1-211ENST00000533001 SAFB2Q14151 953 aaKnown RBP eCLIP2.76□□□□□ -1.973e-7■■□□□ 13.3
KNL1-211ENST00000533001 ZFHX2Q9C0A1 2572 aaPredicted RBP2.76□□□□□ -1.97
KNL1-211ENST00000533001 ACACBO00763 2458 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 BAHCC1Q9P281 2608 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 TTC21AQ8NDW8 1320 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 COL2A1P02458 1487 aaPredicted RBP2.76□□□□□ -1.97
KNL1-211ENST00000533001 ASAP1Q9ULH1 1129 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 ZNF609O15014 1411 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 FAM50AQ14320 339 aaKnown RBP2.76□□□□□ -1.97
KNL1-211ENST00000533001 CD2APQ9Y5K6 639 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 ZDBF2Q9HCK1 2354 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 RLFQ13129 1914 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 ECM29Q5VYK3 1845 aa2.76□□□□□ -1.97
KNL1-211ENST00000533001 PRIM1P49642 420 aaKnown RBP2.75□□□□□ -1.97
KNL1-211ENST00000533001 FMR1Q06787 632 aaKnown RBP eCLIP2.75□□□□□ -1.97
KNL1-211ENST00000533001 POLKQ9UBT6 870 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 CENPJQ9HC77 1338 aaPredicted RBP2.75□□□□□ -1.97
KNL1-211ENST00000533001 IRS2Q9Y4H2 1338 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 PALLDQ8WX93 1383 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 RIC1Q4ADV7 1423 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 POLRMTO00411 1230 aaKnown RBP2.75□□□□□ -1.97
KNL1-211ENST00000533001 ITPR2Q14571 2701 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 UBR5O95071 2799 aaPredicted RBP2.75□□□□□ -1.97
KNL1-211ENST00000533001 DDB1Q16531 1140 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 WASHC2AQ641Q2 1341 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 DNHD1Q96M86 4753 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 SLC27A3Q5K4L6 730 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 KLRG1Q96E93 195 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 ZIC5Q96T25 663 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 AMER1Q5JTC6 1135 aaPredicted RBP2.75□□□□□ -1.97
KNL1-211ENST00000533001 CST9Q5W186 159 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 WBP1LQ9NX94 342 aa2.75□□□□□ -1.97
KNL1-211ENST00000533001 NAV2Q8IVL1 2488 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 USP35Q9P2H5 1018 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 DCAF11Q8TEB1 546 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 USP42Q9H9J4 1324 aaKnown RBP2.74□□□□□ -1.97
KNL1-211ENST00000533001 SIN3AQ96ST3 1273 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 PGAP2Q9UHJ9 254 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 MYO9BQ13459 2157 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 ATRXP46100 2492 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 EGFRP00533 1210 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 PSME1Q06323 249 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 FKBP8Q14318 412 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 MEX3CQ5U5Q3 659 aaKnown RBP2.74□□□□□ -1.97
KNL1-211ENST00000533001 EYA1Q99502 592 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 ZBTB12Q9Y330 459 aaPredicted RBP2.74□□□□□ -1.97
KNL1-211ENST00000533001 MAP1BP46821 2468 aaKnown RBP2.74□□□□□ -1.97
KNL1-211ENST00000533001 GPR179Q6PRD1 2367 aa2.74□□□□□ -1.97
KNL1-211ENST00000533001 SIPA1L1O43166 1804 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 MAP1AP78559 2803 aaPredicted RBP2.73□□□□□ -1.97
KNL1-211ENST00000533001 CNTNAP4Q9C0A0 1308 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 ABTB2Q8N961 1025 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 SOS1Q07889 1333 aaPredicted RBP2.73□□□□□ -1.97
KNL1-211ENST00000533001 L3MBTL3Q96JM7 780 aaPredicted RBP2.73□□□□□ -1.97
KNL1-211ENST00000533001 TOMM70O94826 608 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 EIF5P55010 431 aaKnown RBP2.73□□□□□ -1.97
KNL1-211ENST00000533001 PKD1L2Q7Z442 2459 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 ATG2AQ2TAZ0 1938 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 EP300Q09472 2414 aaPredicted RBP2.73□□□□□ -1.97
KNL1-211ENST00000533001 LTBP3Q9NS15 1303 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 CRY2Q49AN0 593 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.73□□□□□ -1.97
KNL1-211ENST00000533001 STAG3Q9UJ98 1225 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 NF1P21359 2839 aa2.73□□□□□ -1.97
KNL1-211ENST00000533001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.72□□□□□ -1.97
KNL1-211ENST00000533001 ANKRD24Q8TF21 1146 aa2.72□□□□□ -1.97
KNL1-211ENST00000533001 STRN4Q9NRL3 753 aa2.72□□□□□ -1.97
KNL1-211ENST00000533001 FOXN1O15353 648 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 1150.2 ms