RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
SMG1-203ENST00000532700 SCN7AQ01118 1682 aa23.81■■□□□ 1.4
SMG1-203ENST00000532700 FCHSD2O94868 740 aa23.81■■□□□ 1.4
SMG1-203ENST00000532700 BCL2L12Q9HB09 334 aa23.81■■□□□ 1.4
SMG1-203ENST00000532700 ZEB1P37275 1124 aaPredicted RBP23.8■■□□□ 1.4
SMG1-203ENST00000532700 USPL1Q5W0Q7 1092 aa23.8■■□□□ 1.4
SMG1-203ENST00000532700 VSIG10Q8N0Z9 540 aa23.8■■□□□ 1.4
SMG1-203ENST00000532700 NRXN2Q9P2S2 1712 aa23.8■■□□□ 1.4
SMG1-203ENST00000532700 PRAMEF22A3QJZ6 481 aa23.79■■□□□ 1.4
SMG1-203ENST00000532700 TTC5Q8N0Z6 440 aa23.79■■□□□ 1.4
SMG1-203ENST00000532700 PLEKHF1Q96S99 279 aa23.79■■□□□ 1.4
SMG1-203ENST00000532700 KDM3BQ7LBC6 1761 aa23.78■■□□□ 1.4
SMG1-203ENST00000532700 CANXP27824 592 aaKnown RBP23.78■■□□□ 1.4
SMG1-203ENST00000532700 A0A0G2JLW4 131 aa23.77■■□□□ 1.4
SMG1-203ENST00000532700 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
SMG1-203ENST00000532700 TM4SF1P30408 202 aa23.76■■□□□ 1.39
SMG1-203ENST00000532700 BCORQ6W2J9 1755 aa23.75■■□□□ 1.39
SMG1-203ENST00000532700 POLRMTO00411 1230 aaKnown RBP23.75■■□□□ 1.39
SMG1-203ENST00000532700 PARP3Q9Y6F1 533 aa23.75■■□□□ 1.39
SMG1-203ENST00000532700 DPEP1P16444 411 aa23.74■■□□□ 1.39
SMG1-203ENST00000532700 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
SMG1-203ENST00000532700 NARFQ9UHQ1 456 aa23.74■■□□□ 1.39
SMG1-203ENST00000532700 GRIN3BO60391 1043 aa23.73■■□□□ 1.39
SMG1-203ENST00000532700 A1BGP04217 495 aa23.73■■□□□ 1.39
SMG1-203ENST00000532700 KCNA3P22001 575 aa23.73■■□□□ 1.39
SMG1-203ENST00000532700 EIF5P55010 431 aaKnown RBP23.73■■□□□ 1.39
SMG1-203ENST00000532700 NFIXQ14938 502 aa23.73■■□□□ 1.39
SMG1-203ENST00000532700 THUMPD2Q9BTF0 503 aaKnown RBP23.73■■□□□ 1.39
SMG1-203ENST00000532700 MIS18AQ9NYP9 233 aa23.73■■□□□ 1.39
SMG1-203ENST00000532700 LAMB4A4D0S4 1761 aa23.73■■□□□ 1.39
SMG1-203ENST00000532700 FMNL2Q96PY5 1086 aa23.72■■□□□ 1.39
SMG1-203ENST00000532700 USP16Q9Y5T5 823 aa23.72■■□□□ 1.39
SMG1-203ENST00000532700 ARFGEF1Q9Y6D6 1849 aa23.72■■□□□ 1.39
SMG1-203ENST00000532700 ANKRD31Q8N7Z5 1873 aa23.72■■□□□ 1.39
SMG1-203ENST00000532700 CARMIL3Q8ND23 1372 aa23.71■■□□□ 1.39
SMG1-203ENST00000532700 ZPR1O75312 459 aa23.71■■□□□ 1.39
SMG1-203ENST00000532700 DLEC1Q9Y238 1755 aa23.7■■□□□ 1.39
SMG1-203ENST00000532700 ADCY9O60503 1353 aa23.7■■□□□ 1.38
SMG1-203ENST00000532700 STARD3NLO95772 234 aa23.69■■□□□ 1.38
SMG1-203ENST00000532700 CHRNA5P30532 468 aa23.69■■□□□ 1.38
SMG1-203ENST00000532700 TGFB2P61812 414 aa23.69■■□□□ 1.38
SMG1-203ENST00000532700 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
SMG1-203ENST00000532700 ATP10DQ9P241 1426 aa23.68■■□□□ 1.38
SMG1-203ENST00000532700 RALBP1Q15311 655 aa23.68■■□□□ 1.38
SMG1-203ENST00000532700 TBC1D2BQ9UPU7 963 aa23.68■■□□□ 1.38
SMG1-203ENST00000532700 ZNF330Q9Y3S2 320 aaPredicted RBP23.68■■□□□ 1.38
SMG1-203ENST00000532700 COL11A2P13942 1736 aaPredicted RBP23.67■■□□□ 1.38
SMG1-203ENST00000532700 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
SMG1-203ENST00000532700 NFE2L2Q16236 605 aa23.66■■□□□ 1.38
SMG1-203ENST00000532700 BCS1LQ9Y276 419 aa23.66■■□□□ 1.38
SMG1-203ENST00000532700 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
SMG1-203ENST00000532700 BICDL1Q6ZP65 573 aa23.65■■□□□ 1.38
SMG1-203ENST00000532700 MYBBP1AQ9BQG0 1328 aaKnown RBP23.64■■□□□ 1.38
SMG1-203ENST00000532700 NBPF26B4DH59 902 aa23.64■■□□□ 1.37
SMG1-203ENST00000532700 IL6STP40189 918 aaPredicted RBP23.64■■□□□ 1.37
SMG1-203ENST00000532700 NBPF10Q6P3W6 841 aaKnown RBP23.64■■□□□ 1.37
SMG1-203ENST00000532700 NBPF15Q8N660 670 aa23.64■■□□□ 1.37
SMG1-203ENST00000532700 TEX13AQ9BXU3 409 aaPredicted RBP23.64■■□□□ 1.37
SMG1-203ENST00000532700 CAMTA2O94983 1202 aa23.63■■□□□ 1.37
SMG1-203ENST00000532700 SERPINB2P05120 415 aa23.63■■□□□ 1.37
SMG1-203ENST00000532700 TAF7Q15545 349 aaPredicted RBP23.63■■□□□ 1.37
SMG1-203ENST00000532700 CCDC24Q8N4L8 307 aa23.62■■□□□ 1.37
SMG1-203ENST00000532700 SNRPA1P09661 255 aaKnown RBP23.61■■□□□ 1.37
SMG1-203ENST00000532700 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
SMG1-203ENST00000532700 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
SMG1-203ENST00000532700 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
SMG1-203ENST00000532700 A0A087WZG4 1122 aa23.58■■□□□ 1.37
SMG1-203ENST00000532700 ZNF526Q8TF50 670 aaPredicted RBP23.58■■□□□ 1.37
SMG1-203ENST00000532700 SBF1O95248 1867 aa23.58■■□□□ 1.36
SMG1-203ENST00000532700 CACNA1SQ13698 1873 aa23.58■■□□□ 1.36
SMG1-203ENST00000532700 EIF4A1P60842 406 aaKnown RBP23.57■■□□□ 1.36
SMG1-203ENST00000532700 DZIP3Q86Y13 1208 aaKnown RBP23.57■■□□□ 1.36
SMG1-203ENST00000532700 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
SMG1-203ENST00000532700 PIM2Q9P1W9 311 aa23.57■■□□□ 1.36
SMG1-203ENST00000532700 ARHGAP27Q6ZUM4 889 aa23.56■■□□□ 1.36
SMG1-203ENST00000532700 NEFMP07197 916 aa23.55■■□□□ 1.36
SMG1-203ENST00000532700 PRR5LQ6MZQ0 368 aa23.55■■□□□ 1.36
SMG1-203ENST00000532700 GIGYF1O75420 1035 aaPredicted RBP23.54■■□□□ 1.36
SMG1-203ENST00000532700 TMPOP42166 694 aaKnown RBP23.54■■□□□ 1.36
SMG1-203ENST00000532700 RIPK4P57078 832 aa23.54■■□□□ 1.36
SMG1-203ENST00000532700 DALRD3Q5D0E6 543 aaKnown RBP23.53■■□□□ 1.36
SMG1-203ENST00000532700 NUP98P52948 1817 aa23.53■■□□□ 1.36
SMG1-203ENST00000532700 TNRC6CQ9HCJ0 1690 aaKnown RBP23.52■■□□□ 1.36
SMG1-203ENST00000532700 C1QTNF8P60827 252 aa23.52■■□□□ 1.36
SMG1-203ENST00000532700 ADAMTS8Q9UP79 889 aa23.52■■□□□ 1.36
SMG1-203ENST00000532700 PRELPP51888 382 aa23.51■■□□□ 1.35
SMG1-203ENST00000532700 HLFQ16534 295 aa23.51■■□□□ 1.35
SMG1-203ENST00000532700 C2CD5Q86YS7 1000 aa23.51■■□□□ 1.35
SMG1-203ENST00000532700 CCDC88AQ3V6T2 1871 aa23.5■■□□□ 1.35
SMG1-203ENST00000532700 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
SMG1-203ENST00000532700 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
SMG1-203ENST00000532700 RASSF7Q02833 373 aa23.49■■□□□ 1.35
SMG1-203ENST00000532700 CCDC184Q52MB2 194 aa23.49■■□□□ 1.35
SMG1-203ENST00000532700 PNISRQ8TF01 805 aaKnown RBP23.49■■□□□ 1.35
SMG1-203ENST00000532700 PNNQ9H307 717 aaKnown RBP23.49■■□□□ 1.35
SMG1-203ENST00000532700 ARFGEF2Q9Y6D5 1785 aa23.49■■□□□ 1.35
SMG1-203ENST00000532700 SLX4Q8IY92 1834 aa23.49■■□□□ 1.35
SMG1-203ENST00000532700 NGEFQ8N5V2 710 aa23.48■■□□□ 1.35
SMG1-203ENST00000532700 KRT24Q2M2I5 525 aa23.47■■□□□ 1.35
SMG1-203ENST00000532700 TTLL7Q6ZT98 887 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms