RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 IFFO2Q5TF58 517 aa23.24■■□□□ 1.31
CTSB-226ENST00000532656 ZBTB1Q9Y2K1 713 aa23.24■■□□□ 1.31
CTSB-226ENST00000532656 COL15A1P39059 1388 aa23.24■■□□□ 1.31
CTSB-226ENST00000532656 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
CTSB-226ENST00000532656 RNF181Q9P0P0 153 aa23.22■■□□□ 1.31
CTSB-226ENST00000532656 AFDNP55196 1824 aaKnown RBP23.22■■□□□ 1.31
CTSB-226ENST00000532656 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
CTSB-226ENST00000532656 NFIXQ14938 502 aa23.21■■□□□ 1.31
CTSB-226ENST00000532656 NARFQ9UHQ1 456 aa23.21■■□□□ 1.31
CTSB-226ENST00000532656 UBR2Q8IWV8 1755 aa23.2■■□□□ 1.3
CTSB-226ENST00000532656 APLP1P51693 650 aa23.2■■□□□ 1.3
CTSB-226ENST00000532656 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
CTSB-226ENST00000532656 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
CTSB-226ENST00000532656 VSIG10Q8N0Z9 540 aa23.18■■□□□ 1.3
CTSB-226ENST00000532656 BCL2L12Q9HB09 334 aa23.18■■□□□ 1.3
CTSB-226ENST00000532656 SBF1O95248 1867 aa23.17■■□□□ 1.3
CTSB-226ENST00000532656 C16orf71Q8IYS4 520 aaPredicted RBP23.17■■□□□ 1.3
CTSB-226ENST00000532656 COL3A1P02461 1466 aaPredicted RBP23.17■■□□□ 1.3
CTSB-226ENST00000532656 U2SURPO15042 1029 aaKnown RBP23.16■■□□□ 1.3
CTSB-226ENST00000532656 RASSF7Q02833 373 aa23.16■■□□□ 1.3
CTSB-226ENST00000532656 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
CTSB-226ENST00000532656 KDM2BQ8NHM5 1336 aa23.15■■□□□ 1.3
CTSB-226ENST00000532656 SERPINB2P05120 415 aa23.15■■□□□ 1.3
CTSB-226ENST00000532656 RBM46Q8TBY0 533 aaKnown RBP23.15■■□□□ 1.3
CTSB-226ENST00000532656 DLEC1Q9Y238 1755 aa23.14■■□□□ 1.29
CTSB-226ENST00000532656 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
CTSB-226ENST00000532656 RRAGCQ9HB90 399 aa23.13■■□□□ 1.29
CTSB-226ENST00000532656 WDR90Q96KV7 1748 aa23.13■■□□□ 1.29
CTSB-226ENST00000532656 CARMIL3Q8ND23 1372 aa23.13■■□□□ 1.29
CTSB-226ENST00000532656 STARD3NLO95772 234 aa23.12■■□□□ 1.29
CTSB-226ENST00000532656 TEFQ10587 303 aa23.12■■□□□ 1.29
CTSB-226ENST00000532656 DNAJC5GQ8N7S2 189 aa23.12■■□□□ 1.29
CTSB-226ENST00000532656 IL17REQ8NFR9 667 aa23.12■■□□□ 1.29
CTSB-226ENST00000532656 ZNF496Q96IT1 587 aaPredicted RBP23.12■■□□□ 1.29
CTSB-226ENST00000532656 TNRC6CQ9HCJ0 1690 aaKnown RBP23.12■■□□□ 1.29
CTSB-226ENST00000532656 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
CTSB-226ENST00000532656 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
CTSB-226ENST00000532656 GNAT3A8MTJ3 354 aa23.1■■□□□ 1.29
CTSB-226ENST00000532656 ZNF790Q6PG37 636 aa23.1■■□□□ 1.29
CTSB-226ENST00000532656 C2CD5Q86YS7 1000 aa23.1■■□□□ 1.29
CTSB-226ENST00000532656 GAS2L2Q8NHY3 880 aa23.1■■□□□ 1.29
CTSB-226ENST00000532656 ZNF330Q9Y3S2 320 aaPredicted RBP23.1■■□□□ 1.29
CTSB-226ENST00000532656 NPC1L1Q9UHC9 1359 aa23.1■■□□□ 1.29
CTSB-226ENST00000532656 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
CTSB-226ENST00000532656 HTRA3P83110 453 aa23.09■■□□□ 1.29
CTSB-226ENST00000532656 TTLL6Q8N841 843 aa23.09■■□□□ 1.29
CTSB-226ENST00000532656 SCN7AQ01118 1682 aa23.09■■□□□ 1.29
CTSB-226ENST00000532656 A0A087WZG4 1122 aa23.08■■□□□ 1.29
CTSB-226ENST00000532656 PRELPP51888 382 aa23.08■■□□□ 1.29
CTSB-226ENST00000532656 FSTL1Q12841 308 aa23.08■■□□□ 1.29
CTSB-226ENST00000532656 TBC1D9BQ66K14 1250 aa23.08■■□□□ 1.29
CTSB-226ENST00000532656 H0YIN7 160 aa23.07■■□□□ 1.28
CTSB-226ENST00000532656 LMNB1P20700 586 aa23.06■■□□□ 1.28
CTSB-226ENST00000532656 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
CTSB-226ENST00000532656 ANKRD31Q8N7Z5 1873 aa23.06■■□□□ 1.28
CTSB-226ENST00000532656 ZC3H4Q9UPT8 1303 aaKnown RBP23.06■■□□□ 1.28
CTSB-226ENST00000532656 TIAM2Q8IVF5 1701 aa23.05■■□□□ 1.28
CTSB-226ENST00000532656 CCDC24Q8N4L8 307 aa23.05■■□□□ 1.28
CTSB-226ENST00000532656 TEX13AQ9BXU3 409 aaPredicted RBP23.05■■□□□ 1.28
CTSB-226ENST00000532656 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
CTSB-226ENST00000532656 A1BGP04217 495 aa23.04■■□□□ 1.28
CTSB-226ENST00000532656 FMNL2Q96PY5 1086 aa23.04■■□□□ 1.28
CTSB-226ENST00000532656 CEMIPQ8WUJ3 1361 aa23.03■■□□□ 1.28
CTSB-226ENST00000532656 NFKBIEO00221 500 aa23.03■■□□□ 1.28
CTSB-226ENST00000532656 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
CTSB-226ENST00000532656 ZNF622Q969S3 477 aaKnown RBP eCLIP23.03■■□□□ 1.28
CTSB-226ENST00000532656 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
CTSB-226ENST00000532656 COL11A2P13942 1736 aaPredicted RBP23.02■■□□□ 1.28
CTSB-226ENST00000532656 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
CTSB-226ENST00000532656 KCNQ3O43525 872 aa23.02■■□□□ 1.28
CTSB-226ENST00000532656 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
CTSB-226ENST00000532656 PRR5LQ6MZQ0 368 aa23.02■■□□□ 1.28
CTSB-226ENST00000532656 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
CTSB-226ENST00000532656 SMC1BQ8NDV3 1235 aa23.01■■□□□ 1.27
CTSB-226ENST00000532656 KLRG1Q96E93 195 aa23.01■■□□□ 1.27
CTSB-226ENST00000532656 BRIP1Q9BX63 1249 aa23.01■■□□□ 1.27
CTSB-226ENST00000532656 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
CTSB-226ENST00000532656 BTBD11A6QL63 1104 aa23■■□□□ 1.27
CTSB-226ENST00000532656 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
CTSB-226ENST00000532656 CFAP53Q96M91 514 aa23■■□□□ 1.27
CTSB-226ENST00000532656 C21orf2O43822 256 aa22.99■■□□□ 1.27
CTSB-226ENST00000532656 CAMTA2O94983 1202 aa22.99■■□□□ 1.27
CTSB-226ENST00000532656 VEGFAP15692 232 aaPredicted RBP22.99■■□□□ 1.27
CTSB-226ENST00000532656 PDE6BP35913 854 aa22.99■■□□□ 1.27
CTSB-226ENST00000532656 NPHP1O15259 732 aa22.98■■□□□ 1.27
CTSB-226ENST00000532656 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
CTSB-226ENST00000532656 SETDB2Q96T68 719 aa22.98■■□□□ 1.27
CTSB-226ENST00000532656 BCORQ6W2J9 1755 aa22.98■■□□□ 1.27
CTSB-226ENST00000532656 DZIP3Q86Y13 1208 aaKnown RBP22.97■■□□□ 1.27
CTSB-226ENST00000532656 CNBD1Q8NA66 436 aa22.97■■□□□ 1.27
CTSB-226ENST00000532656 PDZRN3Q9UPQ7 1066 aa22.97■■□□□ 1.27
CTSB-226ENST00000532656 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
CTSB-226ENST00000532656 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
CTSB-226ENST00000532656 CACNA1SQ13698 1873 aa22.96■■□□□ 1.27
CTSB-226ENST00000532656 FER1L6Q2WGJ9 1857 aa22.96■■□□□ 1.27
CTSB-226ENST00000532656 MCM10Q7L590 875 aa22.95■■□□□ 1.26
CTSB-226ENST00000532656 JMYQ8N9B5 988 aa22.95■■□□□ 1.26
CTSB-226ENST00000532656 NUDCQ9Y266 331 aa22.95■■□□□ 1.26
CTSB-226ENST00000532656 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
CTSB-226ENST00000532656 ST5P78524 1137 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms