RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RFC4P35249 363 aa17.37■□□□□ 0.37
PCDHA9-202ENST00000532602 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
PCDHA9-202ENST00000532602 CRACR2BQ8N4Y2 399 aaPredicted RBP17.37■□□□□ 0.37
PCDHA9-202ENST00000532602 WWC3Q9ULE0 1092 aa17.37■□□□□ 0.37
PCDHA9-202ENST00000532602 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 TEX13AQ9BXU3 409 aaPredicted RBP17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 GLRX3O76003 335 aaKnown RBP17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 SLC5A1P13866 664 aa17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
PCDHA9-202ENST00000532602 CCDC192P0DO97 292 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 TRIM27P14373 513 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 SLF2Q8IX21 1173 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 SERPINC1P01008 464 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 PPFIBP1Q86W92 1011 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 SSBP05455 408 aaKnown RBP eCLIP17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 ATP6V1AP38606 617 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 MKNK2Q9HBH9 465 aa17.35■□□□□ 0.37
PCDHA9-202ENST00000532602 DESP17661 470 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 TNIP1Q15025 636 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 WDR62O43379 1518 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 CCDC82Q8N4S0 544 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 SPC24Q8NBT2 197 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 SNRKQ9NRH2 765 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 UBE3BQ7Z3V4 1068 aa17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 CWC25Q9NXE8 425 aaPredicted RBP17.34■□□□□ 0.37
PCDHA9-202ENST00000532602 TOM1O60784 492 aa17.33■□□□□ 0.37
PCDHA9-202ENST00000532602 CHMP4BP1P59074 171 aa17.33■□□□□ 0.37
PCDHA9-202ENST00000532602 MPNDQ8N594 471 aa17.33■□□□□ 0.37
PCDHA9-202ENST00000532602 ANKRD36BQ8N2N9 1353 aa17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 TNMDQ9H2S6 317 aa17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 DEF6Q9H4E7 631 aa17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 TRIM21P19474 475 aaKnown RBP17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 CCDC83Q8IWF9 413 aa17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 CEP131Q9UPN4 1083 aa17.33■□□□□ 0.36
PCDHA9-202ENST00000532602 SEC63Q9UGP8 760 aaKnown RBP17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 NSD2O96028 1365 aa17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 ERLIN2O94905 339 aa17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 TTLL12Q14166 644 aaPredicted RBP17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 ZNF771Q7L3S4 317 aaPredicted RBP17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 NAPBQ9H115 298 aa17.32■□□□□ 0.36
PCDHA9-202ENST00000532602 CBFA2T2O43439 604 aa17.31■□□□□ 0.36
PCDHA9-202ENST00000532602 NPHP3Q7Z494 1330 aa17.31■□□□□ 0.36
PCDHA9-202ENST00000532602 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
PCDHA9-202ENST00000532602 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
PCDHA9-202ENST00000532602 ZMYM3Q14202 1370 aa17.31■□□□□ 0.36
PCDHA9-202ENST00000532602 GOLIM4O00461 696 aa17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 GUCY1B3Q02153 619 aa17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 PTPRCP08575 1304 aa17.3■□□□□ 0.36
PCDHA9-202ENST00000532602 CEP57L1Q8IYX8 460 aa17.29■□□□□ 0.36
PCDHA9-202ENST00000532602 ABCC1P33527 1531 aa17.29■□□□□ 0.36
PCDHA9-202ENST00000532602 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
PCDHA9-202ENST00000532602 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
PCDHA9-202ENST00000532602 MATR3P43243 847 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCDHA9-202ENST00000532602 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 PPP1R12BO60237 982 aaPredicted RBP17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 RNF41Q9H4P4 317 aaPredicted RBP17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 FERMT3Q86UX7 667 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 XAGE3Q8WTP9 111 aa17.28■□□□□ 0.36
PCDHA9-202ENST00000532602 ASXL1Q8IXJ9 1541 aa17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 KCNA6P17658 529 aa17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 CCDC96Q2M329 555 aa17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 IQCA1Q86XH1 822 aa17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 PPFIA3O75145 1194 aa17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
PCDHA9-202ENST00000532602 LDHCP07864 332 aa17.27■□□□□ 0.35
PCDHA9-202ENST00000532602 RAB11FIP4Q86YS3 637 aa17.27■□□□□ 0.35
PCDHA9-202ENST00000532602 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.35
PCDHA9-202ENST00000532602 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
PCDHA9-202ENST00000532602 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
PCDHA9-202ENST00000532602 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
PCDHA9-202ENST00000532602 DDB1Q16531 1140 aa17.26■□□□□ 0.35
PCDHA9-202ENST00000532602 PPP4R3AQ6IN85 833 aa17.26■□□□□ 0.35
PCDHA9-202ENST00000532602 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms