RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 MARF1Q9Y4F3 1742 aaKnown RBP12.22□□□□□ -0.45
CDC27-208ENST00000532575 SPATA31E1Q6ZUB1 1445 aa12.21□□□□□ -0.45
CDC27-208ENST00000532575 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.45
CDC27-208ENST00000532575 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
CDC27-208ENST00000532575 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
CDC27-208ENST00000532575 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
CDC27-208ENST00000532575 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.21□□□□□ -0.45
CDC27-208ENST00000532575 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
CDC27-208ENST00000532575 BAG6P46379 1132 aa12.21□□□□□ -0.45
CDC27-208ENST00000532575 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
CDC27-208ENST00000532575 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.45
CDC27-208ENST00000532575 C14orf93Q9H972 538 aaKnown RBP12.21□□□□□ -0.45
CDC27-208ENST00000532575 GOPCQ9HD26 462 aa12.21□□□□□ -0.45
CDC27-208ENST00000532575 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 DHX57Q6P158 1386 aaKnown RBP12.2□□□□□ -0.46
CDC27-208ENST00000532575 KIF1AQ12756 1690 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 TUSC1Q2TAM9 212 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
CDC27-208ENST00000532575 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 GLI3P10071 1580 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
CDC27-208ENST00000532575 A0A0G2JS52 829 aa12.19□□□□□ -0.46
CDC27-208ENST00000532575 ADH1BP00325 375 aa12.19□□□□□ -0.46
CDC27-208ENST00000532575 MYT1Q01538 1121 aa12.19□□□□□ -0.46
CDC27-208ENST00000532575 SPSB2Q99619 263 aa12.19□□□□□ -0.46
CDC27-208ENST00000532575 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
CDC27-208ENST00000532575 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
CDC27-208ENST00000532575 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
CDC27-208ENST00000532575 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
CDC27-208ENST00000532575 POGKQ9P215 609 aa12.18□□□□□ -0.46
CDC27-208ENST00000532575 QPCTQ16769 361 aa12.17□□□□□ -0.46
CDC27-208ENST00000532575 FMN2Q9NZ56 1722 aa12.17□□□□□ -0.46
CDC27-208ENST00000532575 MTMR2Q13614 643 aa12.16□□□□□ -0.46
CDC27-208ENST00000532575 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
CDC27-208ENST00000532575 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
CDC27-208ENST00000532575 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
CDC27-208ENST00000532575 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDC27-208ENST00000532575 KNDC1Q76NI1 1749 aa12.16□□□□□ -0.46
CDC27-208ENST00000532575 NRXN1Q9ULB1 1477 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 LILRB3O75022 631 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 HRCP23327 699 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 SAFB2Q14151 953 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDC27-208ENST00000532575 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
CDC27-208ENST00000532575 FAM160A2Q8N612 972 aaPredicted RBP12.15□□□□□ -0.46
CDC27-208ENST00000532575 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
CDC27-208ENST00000532575 ZBTB3Q9H5J0 574 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 BTG4Q9NY30 223 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
CDC27-208ENST00000532575 ANKARQ7Z5J8 1434 aa12.14□□□□□ -0.47
CDC27-208ENST00000532575 RETREG3Q86VR2 466 aa12.14□□□□□ -0.47
CDC27-208ENST00000532575 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
CDC27-208ENST00000532575 NWD2Q9ULI1 1742 aa12.13□□□□□ -0.47
CDC27-208ENST00000532575 EIF3AQ14152 1382 aaKnown RBP12.13□□□□□ -0.47
CDC27-208ENST00000532575 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
CDC27-208ENST00000532575 SLC6A16Q9GZN6 736 aa12.12□□□□□ -0.47
CDC27-208ENST00000532575 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
CDC27-208ENST00000532575 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
CDC27-208ENST00000532575 S1PR4O95977 384 aa12.11□□□□□ -0.47
CDC27-208ENST00000532575 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
CDC27-208ENST00000532575 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
CDC27-208ENST00000532575 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
CDC27-208ENST00000532575 LRP5O75197 1615 aa12.11□□□□□ -0.47
CDC27-208ENST00000532575 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
CDC27-208ENST00000532575 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
CDC27-208ENST00000532575 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
CDC27-208ENST00000532575 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
CDC27-208ENST00000532575 CFAP99D6REC4 459 aa12.09□□□□□ -0.47
CDC27-208ENST00000532575 PRDM11Q9NQV5 511 aa12.09□□□□□ -0.47
CDC27-208ENST00000532575 DLC1Q96QB1 1528 aa12.09□□□□□ -0.47
CDC27-208ENST00000532575 PLCH1Q4KWH8 1693 aa12.09□□□□□ -0.47
CDC27-208ENST00000532575 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
CDC27-208ENST00000532575 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
CDC27-208ENST00000532575 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
CDC27-208ENST00000532575 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
CDC27-208ENST00000532575 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
CDC27-208ENST00000532575 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
CDC27-208ENST00000532575 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.48
CDC27-208ENST00000532575 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
CDC27-208ENST00000532575 RGPD8O14715 1765 aaPredicted RBP12.06□□□□□ -0.48
CDC27-208ENST00000532575 COL14A1Q05707 1796 aaKnown RBP12.06□□□□□ -0.48
CDC27-208ENST00000532575 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
CDC27-208ENST00000532575 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
CDC27-208ENST00000532575 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
CDC27-208ENST00000532575 DXOO77932 396 aaKnown RBP12.05□□□□□ -0.48
CDC27-208ENST00000532575 JUNDP17535 347 aa12.05□□□□□ -0.48
CDC27-208ENST00000532575 MMP16P51512 607 aa12.05□□□□□ -0.48
CDC27-208ENST00000532575 EZH2Q15910 746 aaKnown RBP12.05□□□□□ -0.48
CDC27-208ENST00000532575 SPATA31A1Q5TZJ5 1347 aa12.05□□□□□ -0.48
CDC27-208ENST00000532575 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
CDC27-208ENST00000532575 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
CDC27-208ENST00000532575 ABCA3Q99758 1704 aa12.04□□□□□ -0.48
CDC27-208ENST00000532575 PPEF1O14829 653 aaPredicted RBP12.04□□□□□ -0.48
CDC27-208ENST00000532575 TRIM37O94972 964 aa12.04□□□□□ -0.48
CDC27-208ENST00000532575 GGCXP38435 758 aa12.04□□□□□ -0.48
CDC27-208ENST00000532575 EVA1CP58658 441 aa12.04□□□□□ -0.48
CDC27-208ENST00000532575 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
CDC27-208ENST00000532575 CAMKK2Q96RR4 588 aa12.04□□□□□ -0.48
CDC27-208ENST00000532575 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms