RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 TBX22Q9Y458 520 aa18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 IL13P35225 146 aa18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 TRPM2O94759 1503 aa18.09■□□□□ 0.49
PCDHA3-202ENST00000532566 CDKL5O76039 1030 aa18.09■□□□□ 0.49
PCDHA3-202ENST00000532566 MAGI2Q86UL8 1455 aa18.09■□□□□ 0.49
PCDHA3-202ENST00000532566 CEP85Q6P2H3 762 aa18.09■□□□□ 0.49
PCDHA3-202ENST00000532566 SPC24Q8NBT2 197 aa18.09■□□□□ 0.49
PCDHA3-202ENST00000532566 BAG4O95429 457 aaKnown RBP18.08■□□□□ 0.49
PCDHA3-202ENST00000532566 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.49
PCDHA3-202ENST00000532566 MTMR7Q9Y216 660 aa18.08■□□□□ 0.49
PCDHA3-202ENST00000532566 NEO1Q92859 1461 aa18.08■□□□□ 0.49
PCDHA3-202ENST00000532566 CCDC69A6NI79 296 aa18.08■□□□□ 0.49
PCDHA3-202ENST00000532566 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.49
PCDHA3-202ENST00000532566 SMC2O95347 1197 aa18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 SNRPA1P09661 255 aaKnown RBP18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 SNX21Q969T3 373 aa18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 NUTM2BA6NNL0 878 aaPredicted RBP18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 NUTM2EB1AL46 878 aaPredicted RBP18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 NUTM2AQ8IVF1 878 aaPredicted RBP18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
PCDHA3-202ENST00000532566 KDM5AP29375 1690 aaKnown RBP18.07■□□□□ 0.48
PCDHA3-202ENST00000532566 SEC24BO95487 1268 aa18.07■□□□□ 0.48
PCDHA3-202ENST00000532566 IFIT5Q13325 482 aaKnown RBP18.07■□□□□ 0.48
PCDHA3-202ENST00000532566 HMGN5P82970 282 aaKnown RBP18.07■□□□□ 0.48
PCDHA3-202ENST00000532566 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 TDO2P48775 406 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 SCAND2PQ9GZW5 306 aaPredicted RBP18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 MPNDQ8N594 471 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 PREX2Q70Z35 1606 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 ANKRD13DQ6ZTN6 518 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 ATP5J2-PTCD1G3V325 749 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
PCDHA3-202ENST00000532566 A0A0U1RQG5 324 aaPredicted RBP18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 HMGB1P09429 215 aaKnown RBP18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 KCNA6P17658 529 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 MAP3K11Q16584 847 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 PLXNC1O60486 1568 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 ESYT1Q9BSJ8 1104 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 KDM5DQ9BY66 1539 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 MAP3K5Q99683 1374 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 STK11IPQ8N1F8 1099 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 LRP2BPQ9P2M1 347 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 PDILTQ8N807 584 aa18.05■□□□□ 0.48
PCDHA3-202ENST00000532566 KSR2Q6VAB6 950 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 ZSCAN30Q86W11 494 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 MNS1Q8NEH6 495 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 NUP133Q8WUM0 1156 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 ANAPC15P60006 121 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 PLEKHM2Q8IWE5 1019 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 TMX3Q96JJ7 454 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 UBAC1Q9BSL1 405 aa18.04■□□□□ 0.48
PCDHA3-202ENST00000532566 CCDC183Q5T5S1 534 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 KLHL40Q2TBA0 621 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 CWC25Q9NXE8 425 aaPredicted RBP18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 GRM8O00222 908 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 TXLNAP40222 546 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 CEP57L1Q8IYX8 460 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 HOXC9P31274 260 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 CCDC70Q6NSX1 233 aa18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 LRRC59Q96AG4 307 aaKnown RBP18.03■□□□□ 0.48
PCDHA3-202ENST00000532566 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.48
PCDHA3-202ENST00000532566 RAI14Q9P0K7 980 aa18.02■□□□□ 0.48
PCDHA3-202ENST00000532566 GPS2Q13227 327 aa18.02■□□□□ 0.48
PCDHA3-202ENST00000532566 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
PCDHA3-202ENST00000532566 MTERF4Q7Z6M4 381 aaKnown RBP18.02■□□□□ 0.47
PCDHA3-202ENST00000532566 MAP7D2Q96T17 732 aa18.02■□□□□ 0.47
PCDHA3-202ENST00000532566 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 STX6O43752 255 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 CEP89Q96ST8 783 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 LINS1Q8NG48 757 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 CHL1O00533 1208 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 TEX13AQ9BXU3 409 aaPredicted RBP18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 ABCF2Q9UG63 623 aa18.01■□□□□ 0.47
PCDHA3-202ENST00000532566 GDPD2Q9HCC8 539 aa18■□□□□ 0.47
PCDHA3-202ENST00000532566 GOLIM4O00461 696 aa18■□□□□ 0.47
PCDHA3-202ENST00000532566 GCP02774 474 aa18■□□□□ 0.47
PCDHA3-202ENST00000532566 SBNO1A3KN83 1393 aa18■□□□□ 0.47
PCDHA3-202ENST00000532566 FILIP1LQ4L180 1135 aa18■□□□□ 0.47
PCDHA3-202ENST00000532566 PLA2R1Q13018 1463 aa18■□□□□ 0.47
PCDHA3-202ENST00000532566 DHX8Q14562 1220 aaKnown RBP17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 IP6K1Q92551 441 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 MYOM2P54296 1465 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 SERPINC1P01008 464 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 GJB2P29033 226 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 WASF1Q92558 559 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms