RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
BRPF3-210ENST00000532538 KCNA3P22001 575 aa20.46■□□□□ 0.87
BRPF3-210ENST00000532538 TEFQ10587 303 aa20.46■□□□□ 0.87
BRPF3-210ENST00000532538 RNF181Q9P0P0 153 aa20.46■□□□□ 0.87
BRPF3-210ENST00000532538 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
BRPF3-210ENST00000532538 MRC1P22897 1456 aa20.45■□□□□ 0.86
BRPF3-210ENST00000532538 TM4SF1P30408 202 aa20.45■□□□□ 0.86
BRPF3-210ENST00000532538 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
BRPF3-210ENST00000532538 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
BRPF3-210ENST00000532538 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
BRPF3-210ENST00000532538 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
BRPF3-210ENST00000532538 TOMM70O94826 608 aa20.44■□□□□ 0.86
BRPF3-210ENST00000532538 STARD3NLO95772 234 aa20.44■□□□□ 0.86
BRPF3-210ENST00000532538 BICDL1Q6ZP65 573 aa20.44■□□□□ 0.86
BRPF3-210ENST00000532538 NMRK2Q9NPI5 230 aa20.44■□□□□ 0.86
BRPF3-210ENST00000532538 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
BRPF3-210ENST00000532538 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
BRPF3-210ENST00000532538 VSIG10Q8N0Z9 540 aa20.43■□□□□ 0.86
BRPF3-210ENST00000532538 UBR2Q8IWV8 1755 aa20.43■□□□□ 0.86
BRPF3-210ENST00000532538 GNAT3A8MTJ3 354 aa20.42■□□□□ 0.86
BRPF3-210ENST00000532538 NFIXQ14938 502 aa20.42■□□□□ 0.86
BRPF3-210ENST00000532538 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
BRPF3-210ENST00000532538 KDM2BQ8NHM5 1336 aa20.42■□□□□ 0.86
BRPF3-210ENST00000532538 SERPINB2P05120 415 aa20.41■□□□□ 0.86
BRPF3-210ENST00000532538 APLP1P51693 650 aa20.41■□□□□ 0.86
BRPF3-210ENST00000532538 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
BRPF3-210ENST00000532538 A0A087WZG4 1122 aa20.4■□□□□ 0.86
BRPF3-210ENST00000532538 NPHP1O15259 732 aa20.4■□□□□ 0.86
BRPF3-210ENST00000532538 DLEC1Q9Y238 1755 aa20.39■□□□□ 0.85
BRPF3-210ENST00000532538 C2CD5Q86YS7 1000 aa20.38■□□□□ 0.85
BRPF3-210ENST00000532538 CACNA1SQ13698 1873 aa20.38■□□□□ 0.85
BRPF3-210ENST00000532538 SIPA1L3O60292 1781 aaPredicted RBP20.37■□□□□ 0.85
BRPF3-210ENST00000532538 NRXN2Q9P2S2 1712 aa20.37■□□□□ 0.85
BRPF3-210ENST00000532538 H0YIN7 160 aa20.37■□□□□ 0.85
BRPF3-210ENST00000532538 TEX13AQ9BXU3 409 aaPredicted RBP20.37■□□□□ 0.85
BRPF3-210ENST00000532538 RRAGCQ9HB90 399 aa20.37■□□□□ 0.85
BRPF3-210ENST00000532538 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
BRPF3-210ENST00000532538 RASSF7Q02833 373 aa20.36■□□□□ 0.85
BRPF3-210ENST00000532538 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
BRPF3-210ENST00000532538 TTLL6Q8N841 843 aa20.36■□□□□ 0.85
BRPF3-210ENST00000532538 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
BRPF3-210ENST00000532538 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
BRPF3-210ENST00000532538 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
BRPF3-210ENST00000532538 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
BRPF3-210ENST00000532538 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
BRPF3-210ENST00000532538 ZNF622Q969S3 477 aaKnown RBP eCLIP20.35■□□□□ 0.85
BRPF3-210ENST00000532538 FMNL2Q96PY5 1086 aa20.35■□□□□ 0.85
BRPF3-210ENST00000532538 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
BRPF3-210ENST00000532538 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
BRPF3-210ENST00000532538 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
BRPF3-210ENST00000532538 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
BRPF3-210ENST00000532538 WDR90Q96KV7 1748 aa20.34■□□□□ 0.85
BRPF3-210ENST00000532538 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
BRPF3-210ENST00000532538 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
BRPF3-210ENST00000532538 COL3A1P02461 1466 aaPredicted RBP20.34■□□□□ 0.85
BRPF3-210ENST00000532538 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.85
BRPF3-210ENST00000532538 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
BRPF3-210ENST00000532538 ZNF219Q9P2Y4 722 aaPredicted RBP20.33■□□□□ 0.85
BRPF3-210ENST00000532538 TBC1D9BQ66K14 1250 aa20.32■□□□□ 0.84
BRPF3-210ENST00000532538 TIAM2Q8IVF5 1701 aa20.32■□□□□ 0.84
BRPF3-210ENST00000532538 ANKRD31Q8N7Z5 1873 aa20.32■□□□□ 0.84
BRPF3-210ENST00000532538 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
BRPF3-210ENST00000532538 A1BGP04217 495 aa20.31■□□□□ 0.84
BRPF3-210ENST00000532538 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
BRPF3-210ENST00000532538 LMNB1P20700 586 aa20.31■□□□□ 0.84
BRPF3-210ENST00000532538 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
BRPF3-210ENST00000532538 CCDC24Q8N4L8 307 aa20.31■□□□□ 0.84
BRPF3-210ENST00000532538 PDE6BP35913 854 aa20.3■□□□□ 0.84
BRPF3-210ENST00000532538 IL6STP40189 918 aaPredicted RBP20.3■□□□□ 0.84
BRPF3-210ENST00000532538 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
BRPF3-210ENST00000532538 CARMIL3Q8ND23 1372 aa20.3■□□□□ 0.84
BRPF3-210ENST00000532538 FSTL1Q12841 308 aa20.29■□□□□ 0.84
BRPF3-210ENST00000532538 PHACTR3Q96KR7 559 aa20.29■□□□□ 0.84
BRPF3-210ENST00000532538 ST5P78524 1137 aa20.28■□□□□ 0.84
BRPF3-210ENST00000532538 DICER1Q9UPY3 1922 aaKnown RBP20.27■□□□□ 0.84
BRPF3-210ENST00000532538 KCNQ3O43525 872 aa20.27■□□□□ 0.84
BRPF3-210ENST00000532538 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
BRPF3-210ENST00000532538 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
BRPF3-210ENST00000532538 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
BRPF3-210ENST00000532538 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
BRPF3-210ENST00000532538 CEP350Q5VT06 3117 aa20.27■□□□□ 0.84
BRPF3-210ENST00000532538 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.83
BRPF3-210ENST00000532538 C21orf2O43822 256 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 NEFMP07197 916 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
BRPF3-210ENST00000532538 HTRA3P83110 453 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
BRPF3-210ENST00000532538 BCORQ6W2J9 1755 aa20.26■□□□□ 0.83
BRPF3-210ENST00000532538 GLTPD2A6NH11 291 aa20.25■□□□□ 0.83
BRPF3-210ENST00000532538 VEGFAP15692 232 aaPredicted RBP20.25■□□□□ 0.83
BRPF3-210ENST00000532538 DPY19L2Q6NUT2 758 aa20.25■□□□□ 0.83
BRPF3-210ENST00000532538 MCM10Q7L590 875 aa20.25■□□□□ 0.83
BRPF3-210ENST00000532538 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
BRPF3-210ENST00000532538 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
BRPF3-210ENST00000532538 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
BRPF3-210ENST00000532538 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
BRPF3-210ENST00000532538 ZNF652Q9Y2D9 606 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms