RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PIBF1Q8WXW3 757 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 TMX3Q96JJ7 454 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
NXF1-213ENST00000532297 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 ERC2O15083 957 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 FLT4P35916 1363 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 HMMRO75330 724 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 BRD1O95696 1058 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 ANXA1P04083 346 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
NXF1-213ENST00000532297 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
NXF1-213ENST00000532297 UPF3BQ9BZI7 483 aaKnown RBP17.97■□□□□ 0.47
NXF1-213ENST00000532297 FAM208AQ9UK61 1670 aaKnown RBP17.97■□□□□ 0.47
NXF1-213ENST00000532297 FAM177BA6PVY3 158 aa17.97■□□□□ 0.47
NXF1-213ENST00000532297 GNAI2P04899 355 aa17.97■□□□□ 0.47
NXF1-213ENST00000532297 STK31Q9BXU1 1019 aa17.97■□□□□ 0.47
NXF1-213ENST00000532297 PHF14O94880 888 aa17.96■□□□□ 0.47
NXF1-213ENST00000532297 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.479e-11■■■■□ 23
NXF1-213ENST00000532297 PPP4R3BQ5MIZ7 849 aa17.96■□□□□ 0.47
NXF1-213ENST00000532297 C17orf53Q8N3J3 647 aaPredicted RBP17.96■□□□□ 0.47
NXF1-213ENST00000532297 IL17REQ8NFR9 667 aa17.96■□□□□ 0.47
NXF1-213ENST00000532297 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
NXF1-213ENST00000532297 TTC12Q9H892 705 aaPredicted RBP17.96■□□□□ 0.47
NXF1-213ENST00000532297 ANO2Q9NQ90 1003 aa17.96■□□□□ 0.47
NXF1-213ENST00000532297 USP25Q9UHP3 1055 aa17.96■□□□□ 0.47
NXF1-213ENST00000532297 SBNO1A3KN83 1393 aa17.96■□□□□ 0.47
NXF1-213ENST00000532297 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.46
NXF1-213ENST00000532297 KIF3AQ9Y496 699 aa17.96■□□□□ 0.46
NXF1-213ENST00000532297 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
NXF1-213ENST00000532297 EIF2S2P20042 333 aaKnown RBP17.95■□□□□ 0.46
NXF1-213ENST00000532297 XRN1Q8IZH2 1706 aaKnown RBP17.95■□□□□ 0.46
NXF1-213ENST00000532297 MX1P20591 662 aa17.95■□□□□ 0.46
NXF1-213ENST00000532297 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
NXF1-213ENST00000532297 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
NXF1-213ENST00000532297 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
NXF1-213ENST00000532297 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
NXF1-213ENST00000532297 LRRCC1Q9C099 1032 aa17.94■□□□□ 0.46
NXF1-213ENST00000532297 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
NXF1-213ENST00000532297 FAM184AQ8NB25 1140 aa17.94■□□□□ 0.46
NXF1-213ENST00000532297 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
NXF1-213ENST00000532297 HOXC9P31274 260 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 UVSSAQ2YD98 709 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 ESYT1Q9BSJ8 1104 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 KCNQ3O43525 872 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 ADCY5O95622 1261 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 GTPBP4Q9BZE4 634 aaKnown RBP17.93■□□□□ 0.46
NXF1-213ENST00000532297 KDRP35968 1356 aa17.93■□□□□ 0.46
NXF1-213ENST00000532297 MCM2P49736 904 aa17.92■□□□□ 0.46
NXF1-213ENST00000532297 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
NXF1-213ENST00000532297 CUL4AQ13619 759 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 USP44Q9H0E7 712 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 KCNA6P17658 529 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 CHMLP26374 656 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
NXF1-213ENST00000532297 OSBPL3Q9H4L5 887 aa17.9■□□□□ 0.46
NXF1-213ENST00000532297 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
NXF1-213ENST00000532297 MARF1Q9Y4F3 1742 aaKnown RBP17.9■□□□□ 0.46
NXF1-213ENST00000532297 CCDC30Q5VVM6 783 aa17.9■□□□□ 0.46
NXF1-213ENST00000532297 LGR6Q9HBX8 967 aa17.9■□□□□ 0.46
NXF1-213ENST00000532297 SPTLC3Q9NUV7 552 aa17.9■□□□□ 0.46
NXF1-213ENST00000532297 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
NXF1-213ENST00000532297 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
NXF1-213ENST00000532297 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
NXF1-213ENST00000532297 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
NXF1-213ENST00000532297 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.45
NXF1-213ENST00000532297 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
NXF1-213ENST00000532297 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
NXF1-213ENST00000532297 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
NXF1-213ENST00000532297 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
NXF1-213ENST00000532297 PDCL2Q8N4E4 241 aa17.88■□□□□ 0.45
NXF1-213ENST00000532297 KIF20AO95235 890 aa17.88■□□□□ 0.45
NXF1-213ENST00000532297 UBTFL1P0CB47 393 aaPredicted RBP17.87■□□□□ 0.45
NXF1-213ENST00000532297 CPA1P15085 419 aa17.87■□□□□ 0.45
NXF1-213ENST00000532297 PLCB2Q00722 1185 aa17.87■□□□□ 0.45
NXF1-213ENST00000532297 MAP3K5Q99683 1374 aa17.87■□□□□ 0.45
NXF1-213ENST00000532297 MCCP23508 829 aa17.87■□□□□ 0.45
NXF1-213ENST00000532297 CCDC183Q5T5S1 534 aa17.87■□□□□ 0.45
NXF1-213ENST00000532297 PPP1R42Q7Z4L9 355 aa17.87■□□□□ 0.45
NXF1-213ENST00000532297 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
NXF1-213ENST00000532297 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
NXF1-213ENST00000532297 SURF6O75683 361 aaKnown RBP17.86■□□□□ 0.45
NXF1-213ENST00000532297 LETM1O95202 739 aaPredicted RBP17.86■□□□□ 0.45
NXF1-213ENST00000532297 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
NXF1-213ENST00000532297 CHPF2Q9P2E5 772 aa17.86■□□□□ 0.45
NXF1-213ENST00000532297 GNAI3P08754 354 aa17.85■□□□□ 0.45
NXF1-213ENST00000532297 WDR33Q9C0J8 1336 aaKnown RBP17.85■□□□□ 0.45
NXF1-213ENST00000532297 RGPD2P0DJD1 1756 aa17.85■□□□□ 0.45
NXF1-213ENST00000532297 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
NXF1-213ENST00000532297 TCHHQ07283 1943 aa17.85■□□□□ 0.45
NXF1-213ENST00000532297 KDM4AO75164 1064 aa17.85■□□□□ 0.45
NXF1-213ENST00000532297 PRAMEF22A3QJZ6 481 aa17.84■□□□□ 0.45
NXF1-213ENST00000532297 TAF7Q15545 349 aaPredicted RBP17.84■□□□□ 0.45
NXF1-213ENST00000532297 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
NXF1-213ENST00000532297 RIOK3O14730 519 aaKnown RBP17.84■□□□□ 0.45
NXF1-213ENST00000532297 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms