RNA–Protein interactions for RNA: ENST00000531705.1

MRPL49-206, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 5 BASIC

Gene MRPL49, Length 489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-206ENST00000531705 KCNQ3O43525 872 aa23.32■■□□□ 1.32
MRPL49-206ENST00000531705 MCM10Q7L590 875 aa23.32■■□□□ 1.32
MRPL49-206ENST00000531705 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
MRPL49-206ENST00000531705 NLGN1Q8N2Q7 840 aa23.32■■□□□ 1.32
MRPL49-206ENST00000531705 FKBP8Q14318 412 aa23.31■■□□□ 1.32
MRPL49-206ENST00000531705 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
MRPL49-206ENST00000531705 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
MRPL49-206ENST00000531705 DDR1Q08345 913 aa23.29■■□□□ 1.32
MRPL49-206ENST00000531705 ARFGEF1Q9Y6D6 1849 aa23.29■■□□□ 1.32
MRPL49-206ENST00000531705 RALBP1Q15311 655 aa23.28■■□□□ 1.32
MRPL49-206ENST00000531705 DLEC1Q9Y238 1755 aa23.27■■□□□ 1.32
MRPL49-206ENST00000531705 BTBD11A6QL63 1104 aa23.27■■□□□ 1.32
MRPL49-206ENST00000531705 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.32
MRPL49-206ENST00000531705 USPL1Q5W0Q7 1092 aa23.26■■□□□ 1.31
MRPL49-206ENST00000531705 RTF1Q92541 710 aaKnown RBP23.25■■□□□ 1.31
MRPL49-206ENST00000531705 FMNL2Q96PY5 1086 aa23.25■■□□□ 1.31
MRPL49-206ENST00000531705 BCL2L12Q9HB09 334 aa23.25■■□□□ 1.31
MRPL49-206ENST00000531705 ANKRD31Q8N7Z5 1873 aa23.25■■□□□ 1.31
MRPL49-206ENST00000531705 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
MRPL49-206ENST00000531705 HTATSF1O43719 755 aaKnown RBP23.24■■□□□ 1.31
MRPL49-206ENST00000531705 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
MRPL49-206ENST00000531705 EIF5P55010 431 aaKnown RBP23.24■■□□□ 1.31
MRPL49-206ENST00000531705 ZNF784Q8NCA9 323 aaPredicted RBP23.24■■□□□ 1.31
MRPL49-206ENST00000531705 NARFQ9UHQ1 456 aa23.24■■□□□ 1.31
MRPL49-206ENST00000531705 PARP3Q9Y6F1 533 aa23.24■■□□□ 1.31
MRPL49-206ENST00000531705 PRAMEF22A3QJZ6 481 aa23.23■■□□□ 1.31
MRPL49-206ENST00000531705 POLRMTO00411 1230 aaKnown RBP23.22■■□□□ 1.31
MRPL49-206ENST00000531705 GRIN3BO60391 1043 aa23.22■■□□□ 1.31
MRPL49-206ENST00000531705 STARD3NLO95772 234 aa23.22■■□□□ 1.31
MRPL49-206ENST00000531705 TM4SF1P30408 202 aa23.22■■□□□ 1.31
MRPL49-206ENST00000531705 ZPR1O75312 459 aa23.21■■□□□ 1.31
MRPL49-206ENST00000531705 NFE2L2Q16236 605 aa23.21■■□□□ 1.31
MRPL49-206ENST00000531705 A1BGP04217 495 aa23.2■■□□□ 1.3
MRPL49-206ENST00000531705 COL11A2P13942 1736 aaPredicted RBP23.19■■□□□ 1.3
MRPL49-206ENST00000531705 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
MRPL49-206ENST00000531705 NFIXQ14938 502 aa23.19■■□□□ 1.3
MRPL49-206ENST00000531705 THUMPD2Q9BTF0 503 aaKnown RBP23.19■■□□□ 1.3
MRPL49-206ENST00000531705 TEX13AQ9BXU3 409 aaPredicted RBP23.19■■□□□ 1.3
MRPL49-206ENST00000531705 DPEP1P16444 411 aa23.18■■□□□ 1.3
MRPL49-206ENST00000531705 TGFB2P61812 414 aa23.18■■□□□ 1.3
MRPL49-206ENST00000531705 USP16Q9Y5T5 823 aa23.18■■□□□ 1.3
MRPL49-206ENST00000531705 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
MRPL49-206ENST00000531705 MIS18AQ9NYP9 233 aa23.17■■□□□ 1.3
MRPL49-206ENST00000531705 ADCY9O60503 1353 aa23.16■■□□□ 1.3
MRPL49-206ENST00000531705 CARMIL3Q8ND23 1372 aa23.16■■□□□ 1.3
MRPL49-206ENST00000531705 NEFMP07197 916 aa23.16■■□□□ 1.3
MRPL49-206ENST00000531705 KCNA3P22001 575 aa23.16■■□□□ 1.3
MRPL49-206ENST00000531705 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
MRPL49-206ENST00000531705 PIP4K2AP48426 406 aaPredicted RBP23.16■■□□□ 1.3
MRPL49-206ENST00000531705 TAF7Q15545 349 aaPredicted RBP23.16■■□□□ 1.3
MRPL49-206ENST00000531705 PRKRIP1Q9H875 184 aaPredicted RBP23.15■■□□□ 1.3
MRPL49-206ENST00000531705 SNRPA1P09661 255 aaKnown RBP23.14■■□□□ 1.29
MRPL49-206ENST00000531705 TBC1D2BQ9UPU7 963 aa23.14■■□□□ 1.29
MRPL49-206ENST00000531705 ZNF330Q9Y3S2 320 aaPredicted RBP23.14■■□□□ 1.29
MRPL49-206ENST00000531705 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
MRPL49-206ENST00000531705 A0A087WZG4 1122 aa23.13■■□□□ 1.29
MRPL49-206ENST00000531705 SBF1O95248 1867 aa23.12■■□□□ 1.29
MRPL49-206ENST00000531705 TBC1D9BQ66K14 1250 aa23.12■■□□□ 1.29
MRPL49-206ENST00000531705 PNNQ9H307 717 aaKnown RBP23.12■■□□□ 1.29
MRPL49-206ENST00000531705 NUP98P52948 1817 aa23.12■■□□□ 1.29
MRPL49-206ENST00000531705 NBPF26B4DH59 902 aa23.11■■□□□ 1.29
MRPL49-206ENST00000531705 CAMTA2O94983 1202 aa23.11■■□□□ 1.29
MRPL49-206ENST00000531705 CHRNA5P30532 468 aa23.11■■□□□ 1.29
MRPL49-206ENST00000531705 NBPF10Q6P3W6 841 aaKnown RBP23.11■■□□□ 1.29
MRPL49-206ENST00000531705 NBPF15Q8N660 670 aa23.11■■□□□ 1.29
MRPL49-206ENST00000531705 BCS1LQ9Y276 419 aa23.11■■□□□ 1.29
MRPL49-206ENST00000531705 ATP10DQ9P241 1426 aa23.1■■□□□ 1.29
MRPL49-206ENST00000531705 SERPINB2P05120 415 aa23.1■■□□□ 1.29
MRPL49-206ENST00000531705 CCDC146Q8IYE0 955 aa23.1■■□□□ 1.29
MRPL49-206ENST00000531705 ARFGEF2Q9Y6D5 1785 aa23.09■■□□□ 1.29
MRPL49-206ENST00000531705 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
MRPL49-206ENST00000531705 BICDL1Q6ZP65 573 aa23.09■■□□□ 1.29
MRPL49-206ENST00000531705 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
MRPL49-206ENST00000531705 DZIP3Q86Y13 1208 aaKnown RBP23.08■■□□□ 1.29
MRPL49-206ENST00000531705 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
MRPL49-206ENST00000531705 RIPK4P57078 832 aa23.07■■□□□ 1.28
MRPL49-206ENST00000531705 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
MRPL49-206ENST00000531705 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
MRPL49-206ENST00000531705 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
MRPL49-206ENST00000531705 CCDC88AQ3V6T2 1871 aa23.06■■□□□ 1.28
MRPL49-206ENST00000531705 PIM2Q9P1W9 311 aa23.05■■□□□ 1.28
MRPL49-206ENST00000531705 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
MRPL49-206ENST00000531705 WDR43Q15061 677 aaKnown RBP eCLIP23.04■■□□□ 1.28
MRPL49-206ENST00000531705 PRR5LQ6MZQ0 368 aa23.03■■□□□ 1.28
MRPL49-206ENST00000531705 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
MRPL49-206ENST00000531705 CCDC24Q8N4L8 307 aa23.02■■□□□ 1.28
MRPL49-206ENST00000531705 RUNDC1Q96C34 613 aa23.02■■□□□ 1.28
MRPL49-206ENST00000531705 TRIM35Q9UPQ4 493 aa23.02■■□□□ 1.28
MRPL49-206ENST00000531705 ANKRD36CQ5JPF3 1778 aa23.01■■□□□ 1.27
MRPL49-206ENST00000531705 DALRD3Q5D0E6 543 aaKnown RBP23.01■■□□□ 1.27
MRPL49-206ENST00000531705 TSPYL4Q9UJ04 414 aa23.01■■□□□ 1.27
MRPL49-206ENST00000531705 TIAM2Q8IVF5 1701 aa23.01■■□□□ 1.27
MRPL49-206ENST00000531705 FER1L6Q2WGJ9 1857 aa23■■□□□ 1.27
MRPL49-206ENST00000531705 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
MRPL49-206ENST00000531705 NEUROD2Q15784 382 aa23■■□□□ 1.27
MRPL49-206ENST00000531705 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
MRPL49-206ENST00000531705 SLX4Q8IY92 1834 aa23■■□□□ 1.27
MRPL49-206ENST00000531705 ARHGAP27Q6ZUM4 889 aa22.99■■□□□ 1.27
MRPL49-206ENST00000531705 C2CD5Q86YS7 1000 aa22.98■■□□□ 1.27
MRPL49-206ENST00000531705 SETDB2Q96T68 719 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms