RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 A1BGP04217 495 aa11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 IFIT2P09913 472 aaKnown RBP11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 ARHGEF25Q86VW2 580 aa11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 DDX49Q9Y6V7 483 aaKnown RBP11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 C19orf44Q9H6X5 657 aa11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
PPFIA1-219ENST00000531657 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 STK3Q13188 491 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 ERC2O15083 957 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 PRPF40AO75400 957 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 GPTP24298 496 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 STK11IPQ8N1F8 1099 aa11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-219ENST00000531657 KCNQ4P56696 695 aa11.66□□□□□ -0.54
PPFIA1-219ENST00000531657 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
PPFIA1-219ENST00000531657 USP26Q9BXU7 913 aa11.66□□□□□ -0.54
PPFIA1-219ENST00000531657 ADGRB2O60241 1585 aa11.66□□□□□ -0.54
PPFIA1-219ENST00000531657 ATP8B2P98198 1209 aa11.66□□□□□ -0.54
PPFIA1-219ENST00000531657 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
PPFIA1-219ENST00000531657 ARHGEF10O15013 1369 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 AKAP4Q5JQC9 854 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 CAVIN1Q6NZI2 390 aaKnown RBP11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 SUCLG2Q96I99 432 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 DIAPH3Q9NSV4 1193 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 DIP2AQ14689 1571 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 SNRKQ9NRH2 765 aa11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-219ENST00000531657 G3BP1Q13283 466 aaKnown RBP eCLIP11.65□□□□□ -0.55
PPFIA1-219ENST00000531657 PTCH1Q13635 1447 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 EPHA10Q5JZY3 1008 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 ST18O60284 1047 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 REC8O95072 547 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 COL9A3Q14050 684 aaPredicted RBP11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 CLASRPQ8N2M8 674 aaKnown RBP11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 CHMP4CQ96CF2 233 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
PPFIA1-219ENST00000531657 A0A087WZG4 1122 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 NEXNQ0ZGT2 675 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 TTLL7Q6ZT98 887 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 TECPR2O15040 1411 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 CYP27B1O15528 508 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 LARP1Q6PKG0 1096 aaKnown RBP11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 RAB11FIP4Q86YS3 637 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 RGS12O14924 1447 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
PPFIA1-219ENST00000531657 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 NECAB1Q8N987 351 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 DDX46Q7L014 1031 aaKnown RBP11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 UBR1Q8IWV7 1749 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 PEAK1Q9H792 1746 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 CHMLP26374 656 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 ESYT1Q9BSJ8 1104 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 ERBB3P21860 1342 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 NPHP4O75161 1426 aaPredicted RBP11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 PXDNQ92626 1479 aa11.62□□□□□ -0.55
PPFIA1-219ENST00000531657 RBM25P49756 843 aaKnown RBP11.61□□□□□ -0.55
PPFIA1-219ENST00000531657 FGD1P98174 961 aa11.61□□□□□ -0.55
PPFIA1-219ENST00000531657 FAM182BQ5T319 152 aa11.61□□□□□ -0.55
PPFIA1-219ENST00000531657 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
PPFIA1-219ENST00000531657 TIMM10P62072 90 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 SEC62Q99442 399 aaKnown RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 VPS37CA5D8V6 355 aaPredicted RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 CASTP20810 708 aaKnown RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 ANO8Q9HCE9 1232 aaPredicted RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 GRM8O00222 908 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
PPFIA1-219ENST00000531657 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms