RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
USP33-217ENST00000531637 GDF9O60383 454 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 UPP2O95045 317 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 TIMP2P16035 220 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 TBCELQ5QJ74 424 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 TMEM214Q6NUQ4 689 aaKnown RBP9.27□□□□□ -0.93
USP33-217ENST00000531637 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
USP33-217ENST00000531637 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
USP33-217ENST00000531637 NIFKQ9BYG3 293 aaKnown RBP9.27□□□□□ -0.93
USP33-217ENST00000531637 FHDC1Q9C0D6 1143 aaPredicted RBP9.27□□□□□ -0.93
USP33-217ENST00000531637 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 BRPF3Q9ULD4 1205 aa9.27□□□□□ -0.93
USP33-217ENST00000531637 MPSTP25325 297 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 NOS2P35228 1153 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 PRR20EP86478 221 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 PRR20CP86479 221 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 PRR20DP86480 221 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 PRR20BP86481 221 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 PRR20AP86496 221 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 RELBQ01201 579 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 NPAS4Q8IUM7 802 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 RGL4Q8IZJ4 473 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 RHBDD1Q8TEB9 315 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
USP33-217ENST00000531637 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 TOR4AQ9NXH8 423 aa9.26□□□□□ -0.93
USP33-217ENST00000531637 J3QL48 77 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 EML1O00423 815 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 BRD2P25440 801 aaKnown RBP9.25□□□□□ -0.93
USP33-217ENST00000531637 AAMPQ13685 434 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 HIF1AQ16665 826 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 RTN1Q16799 776 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
USP33-217ENST00000531637 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
USP33-217ENST00000531637 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 RBCK1Q9BYM8 510 aa9.25□□□□□ -0.93
USP33-217ENST00000531637 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
USP33-217ENST00000531637 FGD1P98174 961 aa9.24□□□□□ -0.93
USP33-217ENST00000531637 ECM1Q16610 540 aa9.24□□□□□ -0.93
USP33-217ENST00000531637 SLC27A3Q5K4L6 730 aa9.24□□□□□ -0.93
USP33-217ENST00000531637 COX20Q5RI15 118 aa9.24□□□□□ -0.93
USP33-217ENST00000531637 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
USP33-217ENST00000531637 TNFRSF10AO00220 468 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 PDE3BQ13370 1112 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 GIPC2Q8TF65 315 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 NGLY1Q96IV0 654 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 SAP130Q9H0E3 1048 aa9.23□□□□□ -0.93
USP33-217ENST00000531637 SMPD1P17405 629 aa9.22□□□□□ -0.93
USP33-217ENST00000531637 ITGAEP38570 1179 aa9.22□□□□□ -0.93
USP33-217ENST00000531637 EIF1AXP47813 144 aaKnown RBP9.22□□□□□ -0.93
USP33-217ENST00000531637 NBPF1Q3BBV0 1214 aa9.22□□□□□ -0.93
USP33-217ENST00000531637 ALDH16A1Q8IZ83 802 aa9.22□□□□□ -0.93
USP33-217ENST00000531637 DMRTB1Q96MA1 342 aa9.22□□□□□ -0.93
USP33-217ENST00000531637 ZNF395Q9H8N7 513 aaPredicted RBP9.22□□□□□ -0.93
USP33-217ENST00000531637 USP3Q9Y6I4 520 aa9.22□□□□□ -0.93
USP33-217ENST00000531637 TNFRSF10BO14763 440 aa9.21□□□□□ -0.94
USP33-217ENST00000531637 ZNF16P17020 682 aaPredicted RBP9.21□□□□□ -0.94
USP33-217ENST00000531637 USP5P45974 858 aa9.21□□□□□ -0.94
USP33-217ENST00000531637 RNF144AP50876 292 aaPredicted RBP9.21□□□□□ -0.94
USP33-217ENST00000531637 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.94
USP33-217ENST00000531637 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
USP33-217ENST00000531637 ZDHHC1Q8WTX9 485 aa9.21□□□□□ -0.94
USP33-217ENST00000531637 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
USP33-217ENST00000531637 GPC6Q9Y625 555 aaPredicted RBP9.21□□□□□ -0.94
USP33-217ENST00000531637 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
USP33-217ENST00000531637 SPINT1O43278 529 aa9.19□□□□□ -0.94
USP33-217ENST00000531637 PCSK2P16519 638 aa9.19□□□□□ -0.94
USP33-217ENST00000531637 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
USP33-217ENST00000531637 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
USP33-217ENST00000531637 GRIP2Q9C0E4 1043 aa9.19□□□□□ -0.94
USP33-217ENST00000531637 POLMQ9NP87 494 aaPredicted RBP9.19□□□□□ -0.94
USP33-217ENST00000531637 ZDHHC3Q9NYG2 299 aa9.19□□□□□ -0.94
USP33-217ENST00000531637 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
USP33-217ENST00000531637 TATP17735 454 aaPredicted RBP9.18□□□□□ -0.94
USP33-217ENST00000531637 DGKZQ13574 1117 aa9.18□□□□□ -0.94
USP33-217ENST00000531637 TMC7Q7Z402 723 aa9.18□□□□□ -0.94
USP33-217ENST00000531637 ZNF295-AS1Q8N0V1 137 aa9.18□□□□□ -0.94
USP33-217ENST00000531637 LRFN2Q9ULH4 789 aa9.18□□□□□ -0.94
USP33-217ENST00000531637 HCN4Q9Y3Q4 1203 aa9.18□□□□□ -0.94
USP33-217ENST00000531637 RGS20O76081 388 aa9.17□□□□□ -0.94
USP33-217ENST00000531637 RPLP1P05386 114 aaKnown RBP9.17□□□□□ -0.94
USP33-217ENST00000531637 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
USP33-217ENST00000531637 HPS1Q92902 700 aa9.17□□□□□ -0.94
USP33-217ENST00000531637 MRRFQ96E11 262 aaKnown RBP9.17□□□□□ -0.94
USP33-217ENST00000531637 SPATA31C2B4DYI2 1134 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 FZD6O60353 706 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 MZF1P28698 734 aaPredicted RBP9.16□□□□□ -0.94
USP33-217ENST00000531637 FBXO33Q7Z6M2 555 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 TTC16Q8NEE8 873 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 IFT43Q96FT9 208 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
USP33-217ENST00000531637 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
USP33-217ENST00000531637 UNCXA6NJT0 531 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms