RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 A0A087WZG4 1122 aa17.5■□□□□ 0.39
SF3B2-212ENST00000531589 BTBD11A6QL63 1104 aa17.5■□□□□ 0.39
SF3B2-212ENST00000531589 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
SF3B2-212ENST00000531589 NPM2Q86SE8 214 aaKnown RBP17.5■□□□□ 0.39
SF3B2-212ENST00000531589 BCS1LQ9Y276 419 aa17.5■□□□□ 0.39
SF3B2-212ENST00000531589 GOLGB1Q14789 3259 aaKnown RBP17.5■□□□□ 0.39
SF3B2-212ENST00000531589 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
SF3B2-212ENST00000531589 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
SF3B2-212ENST00000531589 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
SF3B2-212ENST00000531589 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
SF3B2-212ENST00000531589 DPEP1P16444 411 aa17.49■□□□□ 0.39
SF3B2-212ENST00000531589 TM4SF1P30408 202 aa17.49■□□□□ 0.39
SF3B2-212ENST00000531589 C1QTNF8P60827 252 aa17.49■□□□□ 0.39
SF3B2-212ENST00000531589 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
SF3B2-212ENST00000531589 DDR1Q08345 913 aa17.48■□□□□ 0.39
SF3B2-212ENST00000531589 PIM2Q9P1W9 311 aa17.48■□□□□ 0.39
SF3B2-212ENST00000531589 POLRMTO00411 1230 aaKnown RBP17.47■□□□□ 0.39
SF3B2-212ENST00000531589 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
SF3B2-212ENST00000531589 GPBP1L1Q9HC44 474 aaPredicted RBP17.47■□□□□ 0.39
SF3B2-212ENST00000531589 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
SF3B2-212ENST00000531589 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
SF3B2-212ENST00000531589 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
SF3B2-212ENST00000531589 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-212ENST00000531589 NFIXQ14938 502 aa17.45■□□□□ 0.38
SF3B2-212ENST00000531589 KCNA3P22001 575 aa17.44■□□□□ 0.38
SF3B2-212ENST00000531589 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
SF3B2-212ENST00000531589 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
SF3B2-212ENST00000531589 MCM10Q7L590 875 aa17.44■□□□□ 0.38
SF3B2-212ENST00000531589 ADCY9O60503 1353 aa17.43■□□□□ 0.38
SF3B2-212ENST00000531589 SERPINB2P05120 415 aa17.43■□□□□ 0.38
SF3B2-212ENST00000531589 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
SF3B2-212ENST00000531589 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
SF3B2-212ENST00000531589 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
SF3B2-212ENST00000531589 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
SF3B2-212ENST00000531589 KIAA1551Q9HCM1 1747 aa17.42■□□□□ 0.38
SF3B2-212ENST00000531589 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
SF3B2-212ENST00000531589 RALBP1Q15311 655 aa17.42■□□□□ 0.38
SF3B2-212ENST00000531589 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-212ENST00000531589 KCNQ3O43525 872 aa17.41■□□□□ 0.38
SF3B2-212ENST00000531589 SENP3-EIF4A1A0A087X0R7 540 aa17.4■□□□□ 0.38
SF3B2-212ENST00000531589 A1BGP04217 495 aa17.4■□□□□ 0.38
SF3B2-212ENST00000531589 CHRNA5P30532 468 aa17.4■□□□□ 0.38
SF3B2-212ENST00000531589 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
SF3B2-212ENST00000531589 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
SF3B2-212ENST00000531589 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
SF3B2-212ENST00000531589 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
SF3B2-212ENST00000531589 ZNF526Q8TF50 670 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-212ENST00000531589 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
SF3B2-212ENST00000531589 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
SF3B2-212ENST00000531589 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
SF3B2-212ENST00000531589 H0YIN7 160 aa17.38■□□□□ 0.37
SF3B2-212ENST00000531589 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
SF3B2-212ENST00000531589 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
SF3B2-212ENST00000531589 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
SF3B2-212ENST00000531589 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
SF3B2-212ENST00000531589 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
SF3B2-212ENST00000531589 NPHP1O15259 732 aa17.36■□□□□ 0.37
SF3B2-212ENST00000531589 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
SF3B2-212ENST00000531589 ZNF652Q9Y2D9 606 aa17.36■□□□□ 0.37
SF3B2-212ENST00000531589 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
SF3B2-212ENST00000531589 PDE6BP35913 854 aa17.35■□□□□ 0.37
SF3B2-212ENST00000531589 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
SF3B2-212ENST00000531589 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
SF3B2-212ENST00000531589 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
SF3B2-212ENST00000531589 TTLL6Q8N841 843 aa17.35■□□□□ 0.37
SF3B2-212ENST00000531589 BRIP1Q9BX63 1249 aa17.35■□□□□ 0.37
SF3B2-212ENST00000531589 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
SF3B2-212ENST00000531589 RGL2O15211 777 aa17.34■□□□□ 0.37
SF3B2-212ENST00000531589 CAMTA2O94983 1202 aa17.34■□□□□ 0.37
SF3B2-212ENST00000531589 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
SF3B2-212ENST00000531589 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.37
SF3B2-212ENST00000531589 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
SF3B2-212ENST00000531589 CNBD1Q8NA66 436 aa17.33■□□□□ 0.36
SF3B2-212ENST00000531589 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
SF3B2-212ENST00000531589 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.36
SF3B2-212ENST00000531589 ST5P78524 1137 aa17.32■□□□□ 0.36
SF3B2-212ENST00000531589 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
SF3B2-212ENST00000531589 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
SF3B2-212ENST00000531589 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
SF3B2-212ENST00000531589 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
SF3B2-212ENST00000531589 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
SF3B2-212ENST00000531589 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
SF3B2-212ENST00000531589 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
SF3B2-212ENST00000531589 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
SF3B2-212ENST00000531589 KIF3CO14782 793 aa17.29■□□□□ 0.36
SF3B2-212ENST00000531589 RIPK4P57078 832 aa17.29■□□□□ 0.36
SF3B2-212ENST00000531589 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
SF3B2-212ENST00000531589 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
SF3B2-212ENST00000531589 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
SF3B2-212ENST00000531589 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
SF3B2-212ENST00000531589 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.362e-11■■□□□ 13.1
SF3B2-212ENST00000531589 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
SF3B2-212ENST00000531589 TOMM70O94826 608 aa17.28■□□□□ 0.36
SF3B2-212ENST00000531589 LMNB1P20700 586 aa17.28■□□□□ 0.36
SF3B2-212ENST00000531589 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
SF3B2-212ENST00000531589 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.36
SF3B2-212ENST00000531589 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
SF3B2-212ENST00000531589 THUMPD2Q9BTF0 503 aaKnown RBP17.27■□□□□ 0.36
SF3B2-212ENST00000531589 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
SF3B2-212ENST00000531589 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms