RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-211ENST00000531406 TTC5Q8N0Z6 440 aa17.24■□□□□ 0.35
TM9SF1-211ENST00000531406 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
TM9SF1-211ENST00000531406 N4BP2Q86UW6 1770 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-211ENST00000531406 COL15A1P39059 1388 aa17.24■□□□□ 0.35
TM9SF1-211ENST00000531406 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
TM9SF1-211ENST00000531406 STARD3NLO95772 234 aa17.23■□□□□ 0.35
TM9SF1-211ENST00000531406 HSPA6P17066 643 aa17.23■□□□□ 0.35
TM9SF1-211ENST00000531406 TEFQ10587 303 aa17.23■□□□□ 0.35
TM9SF1-211ENST00000531406 NFIXQ14938 502 aa17.23■□□□□ 0.35
TM9SF1-211ENST00000531406 BCL2L12Q9HB09 334 aa17.23■□□□□ 0.35
TM9SF1-211ENST00000531406 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
TM9SF1-211ENST00000531406 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
TM9SF1-211ENST00000531406 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
TM9SF1-211ENST00000531406 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
TM9SF1-211ENST00000531406 SERPINB2P05120 415 aa17.2■□□□□ 0.34
TM9SF1-211ENST00000531406 EIF5P55010 431 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-211ENST00000531406 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
TM9SF1-211ENST00000531406 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
TM9SF1-211ENST00000531406 CEP350Q5VT06 3117 aa17.2■□□□□ 0.34
TM9SF1-211ENST00000531406 A0A087WZG4 1122 aa17.19■□□□□ 0.34
TM9SF1-211ENST00000531406 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
TM9SF1-211ENST00000531406 HEG1Q9ULI3 1381 aa17.18■□□□□ 0.34
TM9SF1-211ENST00000531406 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
TM9SF1-211ENST00000531406 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
TM9SF1-211ENST00000531406 NMRK2Q9NPI5 230 aa17.18■□□□□ 0.34
TM9SF1-211ENST00000531406 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
TM9SF1-211ENST00000531406 TOMM70O94826 608 aa17.17■□□□□ 0.34
TM9SF1-211ENST00000531406 RNF181Q9P0P0 153 aa17.17■□□□□ 0.34
TM9SF1-211ENST00000531406 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
TM9SF1-211ENST00000531406 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
TM9SF1-211ENST00000531406 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
TM9SF1-211ENST00000531406 KCNQ3O43525 872 aa17.15■□□□□ 0.34
TM9SF1-211ENST00000531406 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
TM9SF1-211ENST00000531406 IL6STP40189 918 aaPredicted RBP17.15■□□□□ 0.34
TM9SF1-211ENST00000531406 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-211ENST00000531406 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
TM9SF1-211ENST00000531406 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 A1BGP04217 495 aa17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 TBC1D2BQ9UPU7 963 aa17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
TM9SF1-211ENST00000531406 H0YIN7 160 aa17.13■□□□□ 0.33
TM9SF1-211ENST00000531406 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
TM9SF1-211ENST00000531406 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
TM9SF1-211ENST00000531406 APLP1P51693 650 aa17.12■□□□□ 0.33
TM9SF1-211ENST00000531406 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
TM9SF1-211ENST00000531406 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
TM9SF1-211ENST00000531406 RASSF7Q02833 373 aa17.11■□□□□ 0.33
TM9SF1-211ENST00000531406 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-211ENST00000531406 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
TM9SF1-211ENST00000531406 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 LMNB1P20700 586 aa17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 PRR5LQ6MZQ0 368 aa17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 MCM10Q7L590 875 aa17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
TM9SF1-211ENST00000531406 PRELPP51888 382 aa17.09■□□□□ 0.33
TM9SF1-211ENST00000531406 CCDC24Q8N4L8 307 aa17.09■□□□□ 0.33
TM9SF1-211ENST00000531406 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
TM9SF1-211ENST00000531406 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
TM9SF1-211ENST00000531406 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.32
TM9SF1-211ENST00000531406 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
TM9SF1-211ENST00000531406 PDE6BP35913 854 aa17.08■□□□□ 0.32
TM9SF1-211ENST00000531406 DZIP3Q86Y13 1208 aaKnown RBP17.08■□□□□ 0.32
TM9SF1-211ENST00000531406 SETDB2Q96T68 719 aa17.08■□□□□ 0.32
TM9SF1-211ENST00000531406 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 NFKBIEO00221 500 aa17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-211ENST00000531406 AFDNP55196 1824 aaKnown RBP17.06■□□□□ 0.32
TM9SF1-211ENST00000531406 FSTL1Q12841 308 aa17.06■□□□□ 0.32
TM9SF1-211ENST00000531406 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
TM9SF1-211ENST00000531406 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
TM9SF1-211ENST00000531406 C21orf2O43822 256 aa17.04■□□□□ 0.32
TM9SF1-211ENST00000531406 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
TM9SF1-211ENST00000531406 CLEC4GQ6UXB4 293 aa17.04■□□□□ 0.32
TM9SF1-211ENST00000531406 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
TM9SF1-211ENST00000531406 SCN7AQ01118 1682 aa17.04■□□□□ 0.32
TM9SF1-211ENST00000531406 NBPF26B4DH59 902 aa17.03■□□□□ 0.32
TM9SF1-211ENST00000531406 NPHP1O15259 732 aa17.03■□□□□ 0.32
TM9SF1-211ENST00000531406 ST5P78524 1137 aa17.03■□□□□ 0.32
TM9SF1-211ENST00000531406 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
TM9SF1-211ENST00000531406 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
TM9SF1-211ENST00000531406 SRGNP10124 158 aa17.02■□□□□ 0.32
TM9SF1-211ENST00000531406 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
TM9SF1-211ENST00000531406 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
TM9SF1-211ENST00000531406 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
TM9SF1-211ENST00000531406 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms