RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
CTNND1-228ENST00000531007 PHKG2P15735 406 aa12.68□□□□□ -0.38
CTNND1-228ENST00000531007 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
CTNND1-228ENST00000531007 TEFQ10587 303 aa12.68□□□□□ -0.38
CTNND1-228ENST00000531007 DCTN1Q14203 1278 aa12.68□□□□□ -0.38
CTNND1-228ENST00000531007 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
CTNND1-228ENST00000531007 ZCRB1Q8TBF4 217 aaKnown RBP12.68□□□□□ -0.38
CTNND1-228ENST00000531007 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
CTNND1-228ENST00000531007 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
CTNND1-228ENST00000531007 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
CTNND1-228ENST00000531007 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
CTNND1-228ENST00000531007 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
CTNND1-228ENST00000531007 TSR2Q969E8 191 aaKnown RBP12.67□□□□□ -0.38
CTNND1-228ENST00000531007 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
CTNND1-228ENST00000531007 TSPYL4Q9UJ04 414 aa12.67□□□□□ -0.38
CTNND1-228ENST00000531007 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
CTNND1-228ENST00000531007 HOXB7P09629 217 aa12.66□□□□□ -0.38
CTNND1-228ENST00000531007 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
CTNND1-228ENST00000531007 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
CTNND1-228ENST00000531007 TWISTNBQ3B726 338 aaPredicted RBP12.66□□□□□ -0.38
CTNND1-228ENST00000531007 UNC5CLQ8IV45 518 aa12.66□□□□□ -0.38
CTNND1-228ENST00000531007 KIF16BQ96L93 1317 aa12.65□□□□□ -0.38
CTNND1-228ENST00000531007 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
CTNND1-228ENST00000531007 POTEMA6NI47 508 aa12.65□□□□□ -0.38
CTNND1-228ENST00000531007 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
CTNND1-228ENST00000531007 VAMP4O75379 141 aa12.65□□□□□ -0.38
CTNND1-228ENST00000531007 AAMPQ13685 434 aa12.65□□□□□ -0.38
CTNND1-228ENST00000531007 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
CTNND1-228ENST00000531007 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
CTNND1-228ENST00000531007 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
CTNND1-228ENST00000531007 VPS72Q15906 364 aa12.64□□□□□ -0.39
CTNND1-228ENST00000531007 ILDR2Q71H61 639 aa12.64□□□□□ -0.39
CTNND1-228ENST00000531007 NGLY1Q96IV0 654 aa12.64□□□□□ -0.39
CTNND1-228ENST00000531007 MRC1P22897 1456 aa12.64□□□□□ -0.39
CTNND1-228ENST00000531007 SPATA31A5Q5VU36 1347 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 SPATA31A7Q8IWB4 1347 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.63□□□□□ -0.39
CTNND1-228ENST00000531007 BTBD11A6QL63 1104 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 ARHGAP45Q92619 1136 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 SMC4Q9NTJ3 1288 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 SCN11AQ9UI33 1791 aa12.63□□□□□ -0.39
CTNND1-228ENST00000531007 EXOC5O00471 708 aa12.62□□□□□ -0.39
CTNND1-228ENST00000531007 CYP27B1O15528 508 aa12.62□□□□□ -0.39
CTNND1-228ENST00000531007 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
CTNND1-228ENST00000531007 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
CTNND1-228ENST00000531007 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
CTNND1-228ENST00000531007 LRP6O75581 1613 aa12.62□□□□□ -0.39
CTNND1-228ENST00000531007 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
CTNND1-228ENST00000531007 BCAR3O75815 825 aa12.61□□□□□ -0.39
CTNND1-228ENST00000531007 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
CTNND1-228ENST00000531007 LCE2DQ5TA82 110 aaPredicted RBP12.61□□□□□ -0.39
CTNND1-228ENST00000531007 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
CTNND1-228ENST00000531007 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
CTNND1-228ENST00000531007 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
CTNND1-228ENST00000531007 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
CTNND1-228ENST00000531007 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
CTNND1-228ENST00000531007 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
CTNND1-228ENST00000531007 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
CTNND1-228ENST00000531007 BCL9LQ86UU0 1499 aa12.6□□□□□ -0.39
CTNND1-228ENST00000531007 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
CTNND1-228ENST00000531007 CHMP4BQ9H444 224 aaKnown RBP12.6□□□□□ -0.39
CTNND1-228ENST00000531007 RYDENQ9NUL5 291 aaKnown RBP12.6□□□□□ -0.39
CTNND1-228ENST00000531007 PPP4R2Q9NY27 417 aa12.6□□□□□ -0.39
CTNND1-228ENST00000531007 TNS2Q63HR2 1409 aa12.6□□□□□ -0.39
CTNND1-228ENST00000531007 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
CTNND1-228ENST00000531007 CABP4P57796 275 aa12.59□□□□□ -0.39
CTNND1-228ENST00000531007 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
CTNND1-228ENST00000531007 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
CTNND1-228ENST00000531007 PTPRCP08575 1304 aa12.59□□□□□ -0.39
CTNND1-228ENST00000531007 EIF4A1P60842 406 aaKnown RBP12.58□□□□□ -0.4
CTNND1-228ENST00000531007 DDB1Q16531 1140 aa12.58□□□□□ -0.4
CTNND1-228ENST00000531007 ZNF772Q68DY9 489 aaPredicted RBP12.58□□□□□ -0.4
CTNND1-228ENST00000531007 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.4
CTNND1-228ENST00000531007 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
CTNND1-228ENST00000531007 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
CTNND1-228ENST00000531007 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
CTNND1-228ENST00000531007 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
CTNND1-228ENST00000531007 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
CTNND1-228ENST00000531007 USP21Q9UK80 565 aa12.58□□□□□ -0.4
CTNND1-228ENST00000531007 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 ST18O60284 1047 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 ZNF790Q6PG37 636 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 POTEAQ6S8J7 498 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 TTC5Q8N0Z6 440 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
CTNND1-228ENST00000531007 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 AFF2P51816 1311 aa12.57□□□□□ -0.4
CTNND1-228ENST00000531007 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
CTNND1-228ENST00000531007 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
CTNND1-228ENST00000531007 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
CTNND1-228ENST00000531007 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
CTNND1-228ENST00000531007 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
CTNND1-228ENST00000531007 TRPC5Q9UL62 973 aaPredicted RBP12.56□□□□□ -0.4
CTNND1-228ENST00000531007 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
CTNND1-228ENST00000531007 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms