RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
RPUSD4-205ENST00000530903 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
RPUSD4-205ENST00000530903 GNAI1P63096 354 aa12.98□□□□□ -0.33
RPUSD4-205ENST00000530903 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
RPUSD4-205ENST00000530903 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 TEFQ10587 303 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 DOT1LQ8TEK3 1739 aa12.97□□□□□ -0.33
RPUSD4-205ENST00000530903 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-205ENST00000530903 MRC1P22897 1456 aa12.96□□□□□ -0.33
RPUSD4-205ENST00000530903 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.34
RPUSD4-205ENST00000530903 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.34
RPUSD4-205ENST00000530903 ITGB4P16144 1822 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 CHL1O00533 1208 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 SNPHO15079 494 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 CABP4P57796 275 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 EXOSC9Q06265 439 aaKnown RBP12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 GSE1Q14687 1217 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 MARCH10Q8NA82 808 aaPredicted RBP12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
RPUSD4-205ENST00000530903 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
RPUSD4-205ENST00000530903 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
RPUSD4-205ENST00000530903 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
RPUSD4-205ENST00000530903 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
RPUSD4-205ENST00000530903 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-205ENST00000530903 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-205ENST00000530903 PDCD7Q8N8D1 485 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-205ENST00000530903 RGS17Q9UGC6 210 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-205ENST00000530903 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
RPUSD4-205ENST00000530903 ILDR2Q71H61 639 aa12.92□□□□□ -0.34
RPUSD4-205ENST00000530903 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-205ENST00000530903 KCNQ3O43525 872 aa12.91□□□□□ -0.34
RPUSD4-205ENST00000530903 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
RPUSD4-205ENST00000530903 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
RPUSD4-205ENST00000530903 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
RPUSD4-205ENST00000530903 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
RPUSD4-205ENST00000530903 PAPPAQ13219 1627 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 RXRBP28702 533 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 TSPYL6Q8N831 410 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
RPUSD4-205ENST00000530903 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 PIGBQ92521 554 aa12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 SUPT16HQ9Y5B9 1047 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
RPUSD4-205ENST00000530903 BCL9O00512 1426 aa12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 RGS12O14924 1447 aa12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 C5P01031 1676 aa12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 VAMP4O75379 141 aa12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
RPUSD4-205ENST00000530903 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
RPUSD4-205ENST00000530903 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-205ENST00000530903 KCNQ2O43526 872 aa12.86□□□□□ -0.35
RPUSD4-205ENST00000530903 BCAR3O75815 825 aa12.86□□□□□ -0.35
RPUSD4-205ENST00000530903 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-205ENST00000530903 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
RPUSD4-205ENST00000530903 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
RPUSD4-205ENST00000530903 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
RPUSD4-205ENST00000530903 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
RPUSD4-205ENST00000530903 BTAF1O14981 1849 aa12.85□□□□□ -0.35
RPUSD4-205ENST00000530903 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
RPUSD4-205ENST00000530903 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
RPUSD4-205ENST00000530903 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
RPUSD4-205ENST00000530903 ANP32EQ9BTT0 268 aa12.84□□□□□ -0.35
RPUSD4-205ENST00000530903 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
RPUSD4-205ENST00000530903 SMC4Q9NTJ3 1288 aa12.84□□□□□ -0.35
RPUSD4-205ENST00000530903 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.35
RPUSD4-205ENST00000530903 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
RPUSD4-205ENST00000530903 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
RPUSD4-205ENST00000530903 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.36
RPUSD4-205ENST00000530903 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
RPUSD4-205ENST00000530903 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
RPUSD4-205ENST00000530903 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
RPUSD4-205ENST00000530903 PLIN1O60240 522 aa12.82□□□□□ -0.36
RPUSD4-205ENST00000530903 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
RPUSD4-205ENST00000530903 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-205ENST00000530903 RRP1P56182 461 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-205ENST00000530903 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
RPUSD4-205ENST00000530903 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms