RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 APLP1P51693 650 aa24.53■■□□□ 1.52
PSMC3-208ENST00000530887 DDR1Q08345 913 aa24.53■■□□□ 1.52
PSMC3-208ENST00000530887 USPL1Q5W0Q7 1092 aa24.53■■□□□ 1.52
PSMC3-208ENST00000530887 ZC3H4Q9UPT8 1303 aaKnown RBP24.53■■□□□ 1.52
PSMC3-208ENST00000530887 CEP350Q5VT06 3117 aa24.52■■□□□ 1.52
PSMC3-208ENST00000530887 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
PSMC3-208ENST00000530887 PDZRN3Q9UPQ7 1066 aa24.52■■□□□ 1.52
PSMC3-208ENST00000530887 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
PSMC3-208ENST00000530887 VIRMAQ69YN4 1812 aaKnown RBP24.51■■□□□ 1.51
PSMC3-208ENST00000530887 KCPQ6ZWJ8 1503 aa24.51■■□□□ 1.51
PSMC3-208ENST00000530887 TEFQ10587 303 aa24.5■■□□□ 1.51
PSMC3-208ENST00000530887 SLC39A6Q13433 755 aa24.5■■□□□ 1.51
PSMC3-208ENST00000530887 C9orf131Q5VYM1 1079 aa24.5■■□□□ 1.51
PSMC3-208ENST00000530887 C16orf71Q8IYS4 520 aaPredicted RBP24.5■■□□□ 1.51
PSMC3-208ENST00000530887 GNAT3A8MTJ3 354 aa24.48■■□□□ 1.51
PSMC3-208ENST00000530887 NPM2Q86SE8 214 aaKnown RBP24.48■■□□□ 1.51
PSMC3-208ENST00000530887 RBM46Q8TBY0 533 aaKnown RBP24.48■■□□□ 1.51
PSMC3-208ENST00000530887 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
PSMC3-208ENST00000530887 ZBTB1Q9Y2K1 713 aa24.48■■□□□ 1.51
PSMC3-208ENST00000530887 UBR2Q8IWV8 1755 aa24.47■■□□□ 1.51
PSMC3-208ENST00000530887 NFIXQ14938 502 aa24.46■■□□□ 1.51
PSMC3-208ENST00000530887 U2SURPO15042 1029 aaKnown RBP24.45■■□□□ 1.5
PSMC3-208ENST00000530887 RNF181Q9P0P0 153 aa24.45■■□□□ 1.5
PSMC3-208ENST00000530887 NRXN2Q9P2S2 1712 aa24.44■■□□□ 1.5
PSMC3-208ENST00000530887 SERPINB2P05120 415 aa24.44■■□□□ 1.5
PSMC3-208ENST00000530887 FSTL1Q12841 308 aa24.44■■□□□ 1.5
PSMC3-208ENST00000530887 ZNF790Q6PG37 636 aa24.44■■□□□ 1.5
PSMC3-208ENST00000530887 NUDCQ9Y266 331 aa24.44■■□□□ 1.5
PSMC3-208ENST00000530887 COL3A1P02461 1466 aaPredicted RBP24.44■■□□□ 1.5
PSMC3-208ENST00000530887 CHRNA5P30532 468 aa24.43■■□□□ 1.5
PSMC3-208ENST00000530887 EIF5P55010 431 aaKnown RBP24.43■■□□□ 1.5
PSMC3-208ENST00000530887 IFFO2Q5TF58 517 aa24.43■■□□□ 1.5
PSMC3-208ENST00000530887 HEG1Q9ULI3 1381 aa24.42■■□□□ 1.5
PSMC3-208ENST00000530887 H0YIN7 160 aa24.42■■□□□ 1.5
PSMC3-208ENST00000530887 CANXP27824 592 aaKnown RBP24.42■■□□□ 1.5
PSMC3-208ENST00000530887 TTLL6Q8N841 843 aa24.42■■□□□ 1.5
PSMC3-208ENST00000530887 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
PSMC3-208ENST00000530887 IL6STP40189 918 aaPredicted RBP24.41■■□□□ 1.5
PSMC3-208ENST00000530887 NMRK2Q9NPI5 230 aa24.41■■□□□ 1.5
PSMC3-208ENST00000530887 AFDNP55196 1824 aaKnown RBP24.4■■□□□ 1.5
PSMC3-208ENST00000530887 LMNB1P20700 586 aa24.39■■□□□ 1.49
PSMC3-208ENST00000530887 PDE6BP35913 854 aa24.39■■□□□ 1.49
PSMC3-208ENST00000530887 BCL2L12Q9HB09 334 aa24.39■■□□□ 1.49
PSMC3-208ENST00000530887 CEMIPQ8WUJ3 1361 aa24.39■■□□□ 1.49
PSMC3-208ENST00000530887 DLEC1Q9Y238 1755 aa24.39■■□□□ 1.49
PSMC3-208ENST00000530887 TNRC6CQ9HCJ0 1690 aaKnown RBP24.38■■□□□ 1.49
PSMC3-208ENST00000530887 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
PSMC3-208ENST00000530887 ZNF496Q96IT1 587 aaPredicted RBP24.38■■□□□ 1.49
PSMC3-208ENST00000530887 SBF1O95248 1867 aa24.37■■□□□ 1.49
PSMC3-208ENST00000530887 C2CD5Q86YS7 1000 aa24.37■■□□□ 1.49
PSMC3-208ENST00000530887 BRIP1Q9BX63 1249 aa24.37■■□□□ 1.49
PSMC3-208ENST00000530887 CARMIL3Q8ND23 1372 aa24.37■■□□□ 1.49
PSMC3-208ENST00000530887 SIPA1L3O60292 1781 aaPredicted RBP24.35■■□□□ 1.49
PSMC3-208ENST00000530887 RTF1Q92541 710 aaKnown RBP24.35■■□□□ 1.49
PSMC3-208ENST00000530887 BTBD11A6QL63 1104 aa24.34■■□□□ 1.49
PSMC3-208ENST00000530887 RGL2O15211 777 aa24.34■■□□□ 1.49
PSMC3-208ENST00000530887 SMC1BQ8NDV3 1235 aa24.33■■□□□ 1.49
PSMC3-208ENST00000530887 SETDB2Q96T68 719 aa24.33■■□□□ 1.49
PSMC3-208ENST00000530887 SCN7AQ01118 1682 aa24.33■■□□□ 1.49
PSMC3-208ENST00000530887 HTATSF1O43719 755 aaKnown RBP24.32■■□□□ 1.48
PSMC3-208ENST00000530887 PRKAR2BP31323 418 aa24.32■■□□□ 1.48
PSMC3-208ENST00000530887 SOGA3Q5TF21 947 aa24.32■■□□□ 1.48
PSMC3-208ENST00000530887 RSPH6AQ9H0K4 717 aa24.32■■□□□ 1.48
PSMC3-208ENST00000530887 GLTPD2A6NH11 291 aa24.31■■□□□ 1.48
PSMC3-208ENST00000530887 NPHP1O15259 732 aa24.31■■□□□ 1.48
PSMC3-208ENST00000530887 ST5P78524 1137 aa24.31■■□□□ 1.48
PSMC3-208ENST00000530887 CLEC4GQ6UXB4 293 aa24.31■■□□□ 1.48
PSMC3-208ENST00000530887 BICDL1Q6ZP65 573 aa24.31■■□□□ 1.48
PSMC3-208ENST00000530887 ZNF652Q9Y2D9 606 aa24.31■■□□□ 1.48
PSMC3-208ENST00000530887 VEGFAP15692 232 aaPredicted RBP24.3■■□□□ 1.48
PSMC3-208ENST00000530887 TBC1D9BQ66K14 1250 aa24.3■■□□□ 1.48
PSMC3-208ENST00000530887 DPY19L2Q6NUT2 758 aa24.3■■□□□ 1.48
PSMC3-208ENST00000530887 CNKSR1Q969H4 720 aa24.3■■□□□ 1.48
PSMC3-208ENST00000530887 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
PSMC3-208ENST00000530887 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
PSMC3-208ENST00000530887 NEFMP07197 916 aa24.29■■□□□ 1.48
PSMC3-208ENST00000530887 DNAJC5GQ8N7S2 189 aa24.29■■□□□ 1.48
PSMC3-208ENST00000530887 CNBD1Q8NA66 436 aa24.29■■□□□ 1.48
PSMC3-208ENST00000530887 SNRPA1P09661 255 aaKnown RBP24.28■■□□□ 1.48
PSMC3-208ENST00000530887 U2AF1L5P0DN76 240 aaPredicted RBP24.28■■□□□ 1.48
PSMC3-208ENST00000530887 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.48
PSMC3-208ENST00000530887 RASSF7Q02833 373 aa24.28■■□□□ 1.48
PSMC3-208ENST00000530887 PRR5LQ6MZQ0 368 aa24.28■■□□□ 1.48
PSMC3-208ENST00000530887 ZNF622Q969S3 477 aaKnown RBP eCLIP24.28■■□□□ 1.482e-9■□□□□ 9.7
PSMC3-208ENST00000530887 TBC1D2BQ9UPU7 963 aa24.28■■□□□ 1.48
PSMC3-208ENST00000530887 WDR90Q96KV7 1748 aa24.27■■□□□ 1.48
PSMC3-208ENST00000530887 DZIP3Q86Y13 1208 aaKnown RBP24.27■■□□□ 1.48
PSMC3-208ENST00000530887 LTBP3Q9NS15 1303 aa24.27■■□□□ 1.48
PSMC3-208ENST00000530887 CAMTA2O94983 1202 aa24.26■■□□□ 1.47
PSMC3-208ENST00000530887 CNGB1Q14028 1251 aaPredicted RBP24.26■■□□□ 1.47
PSMC3-208ENST00000530887 STYK1Q6J9G0 422 aa24.26■■□□□ 1.47
PSMC3-208ENST00000530887 A1BGP04217 495 aa24.25■■□□□ 1.47
PSMC3-208ENST00000530887 KLRG1Q96E93 195 aa24.25■■□□□ 1.47
PSMC3-208ENST00000530887 PHACTR3Q96KR7 559 aa24.25■■□□□ 1.47
PSMC3-208ENST00000530887 NFKBIEO00221 500 aa24.23■■□□□ 1.47
PSMC3-208ENST00000530887 PPP2R1AP30153 589 aa24.23■■□□□ 1.47
PSMC3-208ENST00000530887 MASTLQ96GX5 879 aa24.23■■□□□ 1.47
PSMC3-208ENST00000530887 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
PSMC3-208ENST00000530887 TAOK3Q9H2K8 898 aa24.22■■□□□ 1.47
PSMC3-208ENST00000530887 ANKRD31Q8N7Z5 1873 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms