RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
BDNF-214ENST00000530786 ALDH1L1O75891 902 aa9.18□□□□□ -0.94
BDNF-214ENST00000530786 RLBP1P12271 317 aa9.18□□□□□ -0.94
BDNF-214ENST00000530786 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
BDNF-214ENST00000530786 MED1Q15648 1581 aaPredicted RBP9.17□□□□□ -0.94
BDNF-214ENST00000530786 A0A087WZG4 1122 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 G2E3Q7L622 706 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 ZBTB3Q9H5J0 574 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 OVOS2A0A0G2JMS6 1433 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 LINS1Q8NG48 757 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 CEMIPQ8WUJ3 1361 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 SHPRHQ149N8 1683 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 ROBO1Q9Y6N7 1651 aa9.17□□□□□ -0.94
BDNF-214ENST00000530786 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
BDNF-214ENST00000530786 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 SURF6O75683 361 aaKnown RBP9.16□□□□□ -0.94
BDNF-214ENST00000530786 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 USP16Q9Y5T5 823 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 ZPR1O75312 459 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
BDNF-214ENST00000530786 DNAJC10Q8IXB1 793 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 PIGBQ92521 554 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 ASAP1Q9ULH1 1129 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 STRCP1A6NGW2 1772 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 RXRBP28702 533 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 GORABQ5T7V8 394 aa9.16□□□□□ -0.94
BDNF-214ENST00000530786 MEGF6O75095 1541 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
BDNF-214ENST00000530786 SRGAP3O43295 1099 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 PIP4K2AP48426 406 aaPredicted RBP9.15□□□□□ -0.94
BDNF-214ENST00000530786 AK7Q96M32 723 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 LNPKQ9C0E8 428 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 CAMTA1Q9Y6Y1 1673 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 A1BGP04217 495 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 FAM196AQ6ZSG2 479 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 VSIG10Q8N0Z9 540 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 TMX4Q9H1E5 349 aaPredicted RBP9.15□□□□□ -0.94
BDNF-214ENST00000530786 CWC25Q9NXE8 425 aaPredicted RBP9.15□□□□□ -0.94
BDNF-214ENST00000530786 LTBP4Q8N2S1 1624 aa9.15□□□□□ -0.94
BDNF-214ENST00000530786 HEG1Q9ULI3 1381 aa9.15□□□□□ -0.95
BDNF-214ENST00000530786 FAM177BA6PVY3 158 aa9.15□□□□□ -0.95
BDNF-214ENST00000530786 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.95
BDNF-214ENST00000530786 ERC1Q8IUD2 1116 aa9.15□□□□□ -0.95
BDNF-214ENST00000530786 PLBD2Q8NHP8 589 aa9.15□□□□□ -0.95
BDNF-214ENST00000530786 ABCC6O95255 1503 aa9.15□□□□□ -0.95
BDNF-214ENST00000530786 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
BDNF-214ENST00000530786 FNBP4Q8N3X1 1017 aaPredicted RBP9.14□□□□□ -0.95
BDNF-214ENST00000530786 MEIS3Q99687 375 aa9.14□□□□□ -0.95
BDNF-214ENST00000530786 KRT27Q7Z3Y8 459 aa9.14□□□□□ -0.95
BDNF-214ENST00000530786 ZBTB40Q9NUA8 1239 aa9.14□□□□□ -0.95
BDNF-214ENST00000530786 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
BDNF-214ENST00000530786 LRRFIP2Q9Y608 721 aaKnown RBP9.14□□□□□ -0.95
BDNF-214ENST00000530786 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
BDNF-214ENST00000530786 PHLPP1O60346 1717 aa9.14□□□□□ -0.95
BDNF-214ENST00000530786 IFIT2P09913 472 aaKnown RBP9.14□□□□□ -0.95
BDNF-214ENST00000530786 CLASRPQ8N2M8 674 aaKnown RBP9.14□□□□□ -0.95
BDNF-214ENST00000530786 CCNL1Q9UK58 526 aaPredicted RBP9.14□□□□□ -0.95
BDNF-214ENST00000530786 PEAK1Q9H792 1746 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 SIK1P57059 783 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 DZIP3Q86Y13 1208 aaKnown RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 ABCC4O15439 1325 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 AHDC1Q5TGY3 1603 aaPredicted RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 GRM8O00222 908 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 LTN1O94822 1766 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 METTL22Q9BUU2 404 aaPredicted RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 CCDC57Q2TAC2 916 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 LRRCC1Q9C099 1032 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 TRMT112Q9UI30 125 aaKnown RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 RTCBQ9Y3I0 505 aaKnown RBP9.13□□□□□ -0.95
BDNF-214ENST00000530786 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
BDNF-214ENST00000530786 UBE3BQ7Z3V4 1068 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 RFC4P35249 363 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 ATG3Q9NT62 314 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 GPTP24298 496 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 CHD1LQ86WJ1 897 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 ANKRD44Q8N8A2 993 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
BDNF-214ENST00000530786 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
BDNF-214ENST00000530786 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
BDNF-214ENST00000530786 RAB11FIP3O75154 756 aa9.11□□□□□ -0.95
BDNF-214ENST00000530786 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
BDNF-214ENST00000530786 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
BDNF-214ENST00000530786 BICDL1Q6ZP65 573 aa9.11□□□□□ -0.95
BDNF-214ENST00000530786 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
BDNF-214ENST00000530786 ERC2O15083 957 aa9.11□□□□□ -0.95
BDNF-214ENST00000530786 ALS2Q96Q42 1657 aa9.11□□□□□ -0.95
BDNF-214ENST00000530786 BCL11BQ9C0K0 894 aaPredicted RBP9.1□□□□□ -0.95
BDNF-214ENST00000530786 FAM182BQ5T319 152 aa9.1□□□□□ -0.95
BDNF-214ENST00000530786 CCDC191Q8NCU4 936 aa9.1□□□□□ -0.95
BDNF-214ENST00000530786 PALLDQ8WX93 1383 aa9.1□□□□□ -0.95
BDNF-214ENST00000530786 GNPATO15228 680 aa9.1□□□□□ -0.95
BDNF-214ENST00000530786 IGHDP01880 384 aa9.1□□□□□ -0.95
BDNF-214ENST00000530786 IL6STP40189 918 aaPredicted RBP9.1□□□□□ -0.95
BDNF-214ENST00000530786 ATP8B2P98198 1209 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms