RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 APBA3O96018 575 aa10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 PIP4K2AP48426 406 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 ATF7IPQ6VMQ6 1270 aa10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 FTSJ3Q8IY81 847 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 ARHGAP45Q92619 1136 aa10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 KDM3BQ7LBC6 1761 aa10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 KCNQ4P56696 695 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 AIMP1Q12904 312 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 FLIIQ13045 1269 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 FKBP5Q13451 457 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ITPK1Q13572 414 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PDIA6Q15084 440 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PROSER3Q2NL68 480 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 C20orf194Q5TEA3 1177 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 DZIP1LQ8IYY4 767 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PHAXQ9H814 394 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 CCNL1Q9UK58 526 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ZNF330Q9Y3S2 320 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PTPRCP08575 1304 aa10.83□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 TRIM27P14373 513 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ARXQ96QS3 562 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 TNNQ9UQP3 1299 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ERBB4Q15303 1308 aa10.82□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 DDX58O95786 925 aaKnown RBP10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 SF3B2Q13435 895 aaKnown RBP10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 COPS6Q7L5N1 327 aa10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 XAGE3Q8WTP9 111 aa10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 CRBNQ96SW2 442 aa10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 CCDC87Q9NVE4 849 aa10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 F6X3S4 739 aa10.8□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 CRKLP46109 303 aaKnown RBP10.8□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 SLC4A10Q6U841 1118 aa10.8□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 LINC00116Q8NCU8 138 aa10.8□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 COG6Q9Y2V7 657 aa10.8□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PAPPAQ13219 1627 aa10.8□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ITGB4P16144 1822 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 RLBP1P12271 317 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 SLC27A3Q5K4L6 730 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 INTS5Q6P9B9 1019 aaKnown RBP10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ITPRIPQ8IWB1 547 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 EXOC6Q8TAG9 804 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ZBTB1Q9Y2K1 713 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 BRWD3Q6RI45 1802 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 NHSQ6T4R5 1651 aa10.79□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PLSCR1O15162 318 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 HMGB2P26583 209 aaKnown RBP10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 TXNRD1Q16881 649 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 KSR2Q6VAB6 950 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 KIF6Q6ZMV9 814 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 MAP3K2Q9Y2U5 619 aa10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 VIRMAQ69YN4 1812 aaKnown RBP10.78□□□□□ -0.68
NEDD8-MDP1-201ENST00000530579 IL6STP40189 918 aaPredicted RBP10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 CCT4P50991 539 aaKnown RBP10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 MVPQ14764 893 aaKnown RBP10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 RC3H1Q5TC82 1133 aaKnown RBP10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 TTLL7Q6ZT98 887 aa10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 LRP10Q7Z4F1 713 aa10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 UBR2Q8IWV8 1755 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 A0A087WZG4 1122 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 GNPATO15228 680 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 PROM2Q8N271 834 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 AK7Q96M32 723 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ZBTB3Q9H5J0 574 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ABCC4O15439 1325 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 CNTNAP4Q9C0A0 1308 aa10.76□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 RPS6KA4O75676 772 aa10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 BAG6P46379 1132 aa10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 EIF5P55010 431 aaKnown RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 EN1Q05925 392 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ERICH6BQ5W0A0 696 aa10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 DZIP3Q86Y13 1208 aaKnown RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 MYD88Q99836 296 aa10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 METTL22Q9BUU2 404 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 CHMP4BQ9H444 224 aaKnown RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 DDX19BQ9UMR2 479 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms