RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CNPY2Q9Y2B0 182 aa14.73□□□□□ -0.05
SCN3B-206ENST00000530277 KIF3AQ9Y496 699 aa14.73□□□□□ -0.05
SCN3B-206ENST00000530277 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.73□□□□□ -0.05
SCN3B-206ENST00000530277 RAB3GAP1Q15042 981 aa14.73□□□□□ -0.05
SCN3B-206ENST00000530277 NFATC2IPQ8NCF5 419 aa14.73□□□□□ -0.05
SCN3B-206ENST00000530277 ME1P48163 572 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 ECHDC1Q9NTX5 307 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 ATP8B2P98198 1209 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 KRT28Q7Z3Y7 464 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 XAGE3Q8WTP9 111 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
SCN3B-206ENST00000530277 GJB2P29033 226 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 HOXC9P31274 260 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 CHST3Q7LGC8 479 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 CNNM1Q9NRU3 951 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 KRT85P78386 507 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 SPATA32Q96LK8 384 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 TNMDQ9H2S6 317 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 PALD1Q9ULE6 856 aa14.71□□□□□ -0.05
SCN3B-206ENST00000530277 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.06
SCN3B-206ENST00000530277 PIBF1Q8WXW3 757 aa14.71□□□□□ -0.06
SCN3B-206ENST00000530277 PREX2Q70Z35 1606 aa14.71□□□□□ -0.06
SCN3B-206ENST00000530277 GOLIM4O00461 696 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 RAD21O60216 631 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 IDH1O75874 414 aaKnown RBP14.7□□□□□ -0.06
SCN3B-206ENST00000530277 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
SCN3B-206ENST00000530277 CCDC39Q9UFE4 941 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 RBM25P49756 843 aaKnown RBP14.7□□□□□ -0.06
SCN3B-206ENST00000530277 SYNE3Q6ZMZ3 975 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 GAS2L3Q86XJ1 694 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 CHMLP26374 656 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 VPS37DQ86XT2 251 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 SNX21Q969T3 373 aa14.7□□□□□ -0.06
SCN3B-206ENST00000530277 NBPF6Q5VWK0 638 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 NBPF4Q96M43 638 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 PUS7Q96PZ0 661 aaKnown RBP14.69□□□□□ -0.06
SCN3B-206ENST00000530277 PRDM10Q9NQV6 1147 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 PRR36Q9H6K5 1346 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
SCN3B-206ENST00000530277 CCDC57Q2TAC2 916 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 UNC5CLQ8IV45 518 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 IL17REQ8NFR9 667 aa14.69□□□□□ -0.06
SCN3B-206ENST00000530277 KDM5AP29375 1690 aaKnown RBP14.69□□□□□ -0.06
SCN3B-206ENST00000530277 STX6O43752 255 aa14.68□□□□□ -0.06
SCN3B-206ENST00000530277 TTC39AQ5SRH9 613 aa14.68□□□□□ -0.06
SCN3B-206ENST00000530277 TRPM1Q7Z4N2 1603 aa14.68□□□□□ -0.06
SCN3B-206ENST00000530277 NUTM2BA6NNL0 878 aaPredicted RBP14.68□□□□□ -0.06
SCN3B-206ENST00000530277 NUTM2EB1AL46 878 aaPredicted RBP14.68□□□□□ -0.06
SCN3B-206ENST00000530277 USP48Q86UV5 1035 aa14.68□□□□□ -0.06
SCN3B-206ENST00000530277 NUTM2AQ8IVF1 878 aaPredicted RBP14.68□□□□□ -0.06
SCN3B-206ENST00000530277 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
SCN3B-206ENST00000530277 DNM1Q05193 864 aaKnown RBP14.68□□□□□ -0.06
SCN3B-206ENST00000530277 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
SCN3B-206ENST00000530277 FLT4P35916 1363 aa14.68□□□□□ -0.06
SCN3B-206ENST00000530277 ISM2Q6H9L7 571 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 CHD1O14646 1710 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 UQCRHLA0A096LP55 91 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 KINO60870 393 aaKnown RBP14.67□□□□□ -0.06
SCN3B-206ENST00000530277 GCP02774 474 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 UQCRHP07919 91 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 PDCP20941 246 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 AK2P54819 239 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 HOMER1Q86YM7 354 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
SCN3B-206ENST00000530277 TRPM2O94759 1503 aa14.67□□□□□ -0.06
SCN3B-206ENST00000530277 TRIM29Q14134 588 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 BICDL1Q6ZP65 573 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 CLTCL1P53675 1640 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 PRAMEF22A3QJZ6 481 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 STK38Q15208 465 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
SCN3B-206ENST00000530277 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
SCN3B-206ENST00000530277 NUP62CLQ9H1M0 184 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 TTC12Q9H892 705 aaPredicted RBP14.66□□□□□ -0.06
SCN3B-206ENST00000530277 CDC42BPBQ9Y5S2 1711 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 SMC2O95347 1197 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 CCDC192P0DO97 292 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 FAM177A1Q8N128 213 aaPredicted RBP14.66□□□□□ -0.06
SCN3B-206ENST00000530277 SYNMO15061 1565 aa14.66□□□□□ -0.06
SCN3B-206ENST00000530277 SBNO2Q9Y2G9 1366 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 HSPA2P54652 639 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 ANKRD13DQ6ZTN6 518 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 ANTXR1Q9H6X2 564 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 TPM4P67936 248 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 LMBR1LQ6UX01 489 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 BRF1Q92994 677 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 FAM227BQ96M60 508 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 RBSNQ9H1K0 784 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 ADCY10Q96PN6 1610 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 USP44Q9H0E7 712 aa14.65□□□□□ -0.06
SCN3B-206ENST00000530277 GRM8O00222 908 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms