RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 ZNF76P36508 570 aa9.95□□□□□ -0.82
CTNND1-225ENST00000530094 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
CTNND1-225ENST00000530094 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
CTNND1-225ENST00000530094 TTC37Q6PGP7 1564 aa9.95□□□□□ -0.82
CTNND1-225ENST00000530094 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
CTNND1-225ENST00000530094 IMMTQ16891 758 aaKnown RBP9.94□□□□□ -0.82
CTNND1-225ENST00000530094 LRP2BPQ9P2M1 347 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 SLC39A6Q13433 755 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 CWC15Q9P013 229 aaKnown RBP9.94□□□□□ -0.82
CTNND1-225ENST00000530094 ADGRL2O95490 1459 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 IQCEQ6IPM2 695 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 STK11IPQ8N1F8 1099 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 EHMT1Q9H9B1 1298 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 IFIT1P09914 478 aaKnown RBP9.94□□□□□ -0.82
CTNND1-225ENST00000530094 POTEJP0CG39 1038 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 EIF4A2Q14240 407 aaKnown RBP9.94□□□□□ -0.82
CTNND1-225ENST00000530094 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
CTNND1-225ENST00000530094 F6X3S4 739 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNND1-225ENST00000530094 DEF6Q9H4E7 631 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 SERPINC1P01008 464 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 RPGRQ92834 1020 aaKnown RBP9.93□□□□□ -0.82
CTNND1-225ENST00000530094 AIDAQ96BJ3 306 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 TEX13AQ9BXU3 409 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-225ENST00000530094 PDRG1Q9NUG6 133 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 ANXA1P04083 346 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 SLFN5Q08AF3 891 aa9.93□□□□□ -0.82
CTNND1-225ENST00000530094 METTL24Q5JXM2 366 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 PPP4R3AQ6IN85 833 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 PHAXQ9H814 394 aaKnown RBP9.92□□□□□ -0.82
CTNND1-225ENST00000530094 ANKIB1Q9P2G1 1089 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-225ENST00000530094 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-225ENST00000530094 CEP57L1Q8IYX8 460 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 SEC63Q9UGP8 760 aaKnown RBP9.92□□□□□ -0.82
CTNND1-225ENST00000530094 MAP4K4O95819 1239 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-225ENST00000530094 CHD1LQ86WJ1 897 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 TANGO6Q9C0B7 1094 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 TNMDQ9H2S6 317 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 IL1RAPL2Q9NP60 686 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 ME1P48163 572 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 MAP7D2Q96T17 732 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 GOLGA6L10A6NI86 522 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 KDM4AO75164 1064 aa9.92□□□□□ -0.82
CTNND1-225ENST00000530094 CAVIN1Q6NZI2 390 aaKnown RBP9.92□□□□□ -0.82
CTNND1-225ENST00000530094 CCDC196A0A1B0GTZ2 297 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 K7ELQ4 463 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 SNRPA1P09661 255 aaKnown RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 ZHX3Q9H4I2 956 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 HYPKQ9NX55 129 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 A0A1W2PP64 1363 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 KIF1BPQ96EK5 621 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 FLT4P35916 1363 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 KDM6BO15054 1643 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 EIF2AK4Q9P2K8 1649 aaKnown RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 ALDH1L2Q3SY69 923 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 ZNF622Q969S3 477 aaKnown RBP eCLIP9.91□□□□□ -0.823e-7■□□□□ 10.1
CTNND1-225ENST00000530094 WWC3Q9ULE0 1092 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 U3KPZ7 1027 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 SAMD9LQ8IVG5 1584 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 A0A087WZG4 1122 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 TRAK2O60296 914 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 HMGN5P82970 282 aaKnown RBP9.91□□□□□ -0.82
CTNND1-225ENST00000530094 CCDC181Q5TID7 509 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 TMEM57Q8N5G2 664 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 SSH1Q8WYL5 1049 aa9.91□□□□□ -0.82
CTNND1-225ENST00000530094 USP21Q9UK80 565 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 TMEM94Q12767 1356 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 SLC5A1P13866 664 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 HOXC9P31274 260 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 ABCF2Q9UG63 623 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 MAP3K19Q56UN5 1328 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 MAGI2Q86UL8 1455 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 MBD5Q9P267 1494 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 FIBPO43427 364 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 PRPF40AO75400 957 aaKnown RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 USP5P45974 858 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 SEPT7Q16181 437 aaKnown RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 SMARCC1Q92922 1105 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.826e-7■■■■□ 22.1
CTNND1-225ENST00000530094 CRACR2BQ8N4Y2 399 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-225ENST00000530094 TESK2Q96S53 571 aa9.9□□□□□ -0.82
CTNND1-225ENST00000530094 GLRX3O76003 335 aaKnown RBP9.9□□□□□ -0.83
CTNND1-225ENST00000530094 CETN2P41208 172 aa9.9□□□□□ -0.83
CTNND1-225ENST00000530094 TFCP2L1Q9NZI6 479 aa9.9□□□□□ -0.83
CTNND1-225ENST00000530094 IFIT5Q13325 482 aaKnown RBP9.89□□□□□ -0.83
CTNND1-225ENST00000530094 NEBLO76041 1014 aa9.89□□□□□ -0.83
CTNND1-225ENST00000530094 POLR3DP05423 398 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-225ENST00000530094 AKAP4Q5JQC9 854 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms