RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 PRELPP51888 382 aa15.52■□□□□ 0.08
SF3B2-208ENST00000529994 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.08
SF3B2-208ENST00000529994 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
SF3B2-208ENST00000529994 NFIXQ14938 502 aa15.51■□□□□ 0.07
SF3B2-208ENST00000529994 SOS1Q07889 1333 aaPredicted RBP15.5■□□□□ 0.07
SF3B2-208ENST00000529994 VEGFAP15692 232 aaPredicted RBP15.5■□□□□ 0.07
SF3B2-208ENST00000529994 LMNB1P20700 586 aa15.5■□□□□ 0.07
SF3B2-208ENST00000529994 PANK3Q9H999 370 aa15.5■□□□□ 0.07
SF3B2-208ENST00000529994 TIAM2Q8IVF5 1701 aa15.5■□□□□ 0.07
SF3B2-208ENST00000529994 VIRMAQ69YN4 1812 aaKnown RBP15.5■□□□□ 0.07
SF3B2-208ENST00000529994 DLEC1Q9Y238 1755 aa15.49■□□□□ 0.07
SF3B2-208ENST00000529994 GLTPD2A6NH11 291 aa15.49■□□□□ 0.07
SF3B2-208ENST00000529994 HSPA1AP0DMV8 641 aaKnown RBP15.49■□□□□ 0.07
SF3B2-208ENST00000529994 HSPA1BP0DMV9 641 aaKnown RBP15.49■□□□□ 0.07
SF3B2-208ENST00000529994 SLC39A6Q13433 755 aa15.49■□□□□ 0.07
SF3B2-208ENST00000529994 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
SF3B2-208ENST00000529994 LGR6Q9HBX8 967 aa15.49■□□□□ 0.07
SF3B2-208ENST00000529994 SERPINB2P05120 415 aa15.48■□□□□ 0.07
SF3B2-208ENST00000529994 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
SF3B2-208ENST00000529994 NRXN2Q9P2S2 1712 aa15.48■□□□□ 0.07
SF3B2-208ENST00000529994 COL15A1P39059 1388 aa15.48■□□□□ 0.07
SF3B2-208ENST00000529994 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
SF3B2-208ENST00000529994 BICDL1Q6ZP65 573 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 C2CD5Q86YS7 1000 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 TTLL6Q8N841 843 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 ZBTB1Q9Y2K1 713 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 CARMIL3Q8ND23 1372 aa15.47■□□□□ 0.07
SF3B2-208ENST00000529994 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
SF3B2-208ENST00000529994 NFKBIEO00221 500 aa15.45■□□□□ 0.06
SF3B2-208ENST00000529994 IL13P35225 146 aa15.45■□□□□ 0.06
SF3B2-208ENST00000529994 AKAP4Q5JQC9 854 aa15.45■□□□□ 0.06
SF3B2-208ENST00000529994 POTECB2RU33 542 aa15.44■□□□□ 0.06
SF3B2-208ENST00000529994 H0YIN7 160 aa15.44■□□□□ 0.06
SF3B2-208ENST00000529994 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
SF3B2-208ENST00000529994 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
SF3B2-208ENST00000529994 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
SF3B2-208ENST00000529994 HMOX1P09601 288 aa15.43■□□□□ 0.06
SF3B2-208ENST00000529994 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.061e-11■■□□□ 12
SF3B2-208ENST00000529994 ANKRD31Q8N7Z5 1873 aa15.43■□□□□ 0.06
SF3B2-208ENST00000529994 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
SF3B2-208ENST00000529994 DICER1Q9UPY3 1922 aaKnown RBP15.42■□□□□ 0.06
SF3B2-208ENST00000529994 MRC1P22897 1456 aa15.41■□□□□ 0.06
SF3B2-208ENST00000529994 C21orf2O43822 256 aa15.41■□□□□ 0.06
SF3B2-208ENST00000529994 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
SF3B2-208ENST00000529994 EIF4G2P78344 907 aaKnown RBP eCLIP15.41■□□□□ 0.065e-14■□□□□ 8.2
SF3B2-208ENST00000529994 MKRN1Q9UHC7 482 aaKnown RBP15.41■□□□□ 0.06
SF3B2-208ENST00000529994 ZNF330Q9Y3S2 320 aaPredicted RBP15.41■□□□□ 0.06
SF3B2-208ENST00000529994 CACNA1SQ13698 1873 aa15.41■□□□□ 0.06
SF3B2-208ENST00000529994 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
SF3B2-208ENST00000529994 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
SF3B2-208ENST00000529994 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
SF3B2-208ENST00000529994 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-208ENST00000529994 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
SF3B2-208ENST00000529994 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
SF3B2-208ENST00000529994 MTHFSDQ2M296 383 aaKnown RBP15.39■□□□□ 0.05
SF3B2-208ENST00000529994 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
SF3B2-208ENST00000529994 KNSTRNQ9Y448 316 aa15.38■□□□□ 0.05
SF3B2-208ENST00000529994 DDNO94850 711 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-208ENST00000529994 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
SF3B2-208ENST00000529994 PRR5LQ6MZQ0 368 aa15.37■□□□□ 0.05
SF3B2-208ENST00000529994 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
SF3B2-208ENST00000529994 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
SF3B2-208ENST00000529994 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
SF3B2-208ENST00000529994 SLX4Q8IY92 1834 aa15.37■□□□□ 0.05
SF3B2-208ENST00000529994 STARD3NLO95772 234 aa15.36■□□□□ 0.05
SF3B2-208ENST00000529994 PDE6BP35913 854 aa15.36■□□□□ 0.05
SF3B2-208ENST00000529994 TTC5Q8N0Z6 440 aa15.36■□□□□ 0.05
SF3B2-208ENST00000529994 BRIP1Q9BX63 1249 aa15.36■□□□□ 0.05
SF3B2-208ENST00000529994 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
SF3B2-208ENST00000529994 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
SF3B2-208ENST00000529994 A0A087WZG4 1122 aa15.35■□□□□ 0.05
SF3B2-208ENST00000529994 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-208ENST00000529994 TAOK3Q9H2K8 898 aa15.35■□□□□ 0.05
SF3B2-208ENST00000529994 NPHP1O15259 732 aa15.34■□□□□ 0.05
SF3B2-208ENST00000529994 FOXN1O15353 648 aa15.34■□□□□ 0.05
SF3B2-208ENST00000529994 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
SF3B2-208ENST00000529994 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
SF3B2-208ENST00000529994 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
SF3B2-208ENST00000529994 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
SF3B2-208ENST00000529994 PDZRN3Q9UPQ7 1066 aa15.32■□□□□ 0.04
SF3B2-208ENST00000529994 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
SF3B2-208ENST00000529994 A1BGP04217 495 aa15.31■□□□□ 0.04
SF3B2-208ENST00000529994 TEFQ10587 303 aa15.31■□□□□ 0.04
SF3B2-208ENST00000529994 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
SF3B2-208ENST00000529994 CNKSR1Q969H4 720 aa15.31■□□□□ 0.04
SF3B2-208ENST00000529994 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
SF3B2-208ENST00000529994 HEG1Q9ULI3 1381 aa15.31■□□□□ 0.04
SF3B2-208ENST00000529994 DIAPH1O60610 1272 aaKnown RBP15.3■□□□□ 0.04
SF3B2-208ENST00000529994 SRGNP10124 158 aa15.3■□□□□ 0.04
SF3B2-208ENST00000529994 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
SF3B2-208ENST00000529994 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
SF3B2-208ENST00000529994 ARFGEF2Q9Y6D5 1785 aa15.3■□□□□ 0.04
SF3B2-208ENST00000529994 SCN4AP35499 1836 aa15.29■□□□□ 0.04
SF3B2-208ENST00000529994 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-208ENST00000529994 PASKQ96RG2 1323 aa15.29■□□□□ 0.04
SF3B2-208ENST00000529994 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
SF3B2-208ENST00000529994 IL6STP40189 918 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms