RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 HOMEZQ8IX15 550 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 INSM2Q96T92 566 aaPredicted RBP8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 TNIKQ9UKE5 1360 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 INHAP05111 366 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 SEC13P55735 322 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 CNKSR1Q969H4 720 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
AMBRA1-209ENST00000529963 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
AMBRA1-209ENST00000529963 Q6ZNB5 142 aa8.58□□□□□ -1.04
AMBRA1-209ENST00000529963 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
AMBRA1-209ENST00000529963 TTBK1Q5TCY1 1321 aaPredicted RBP8.58□□□□□ -1.04
AMBRA1-209ENST00000529963 UPP2O95045 317 aa8.57□□□□□ -1.04
AMBRA1-209ENST00000529963 CTSOP43234 321 aaPredicted RBP8.57□□□□□ -1.04
AMBRA1-209ENST00000529963 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
AMBRA1-209ENST00000529963 TNS4Q8IZW8 715 aa8.57□□□□□ -1.04
AMBRA1-209ENST00000529963 HINFPQ9BQA5 517 aa8.57□□□□□ -1.04
AMBRA1-209ENST00000529963 POLMQ9NP87 494 aaPredicted RBP8.57□□□□□ -1.04
AMBRA1-209ENST00000529963 IQGAP2Q13576 1575 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 CLN3Q13286 438 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 ESCO1Q5FWF5 840 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 TBCELQ5QJ74 424 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 NLRP3Q96P20 1036 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 DISP3Q9P2K9 1392 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 ABCC2Q92887 1545 aa8.56□□□□□ -1.04
AMBRA1-209ENST00000529963 LCE2BO14633 110 aa8.55□□□□□ -1.04
AMBRA1-209ENST00000529963 CENPCQ03188 943 aa8.55□□□□□ -1.04
AMBRA1-209ENST00000529963 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
AMBRA1-209ENST00000529963 ZFP42Q96MM3 310 aa8.55□□□□□ -1.04
AMBRA1-209ENST00000529963 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
AMBRA1-209ENST00000529963 SPINT1O43278 529 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 TLR1Q15399 786 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 ATP13A2Q9NQ11 1180 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 USP3Q9Y6I4 520 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 SCARF1Q14162 830 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 PRIMPOLQ96LW4 560 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 ASXL2Q76L83 1435 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 UACAQ9BZF9 1416 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 UHRF1BP1LA0JNW5 1464 aa8.54□□□□□ -1.04
AMBRA1-209ENST00000529963 PRMT3O60678 531 aa8.53□□□□□ -1.04
AMBRA1-209ENST00000529963 SMTNP53814 917 aa8.53□□□□□ -1.04
AMBRA1-209ENST00000529963 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
AMBRA1-209ENST00000529963 RAPGEF2Q9Y4G8 1499 aa8.53□□□□□ -1.04
AMBRA1-209ENST00000529963 SOBPA7XYQ1 873 aa8.52□□□□□ -1.05
AMBRA1-209ENST00000529963 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
AMBRA1-209ENST00000529963 BACH1O14867 736 aa8.52□□□□□ -1.05
AMBRA1-209ENST00000529963 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
AMBRA1-209ENST00000529963 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
AMBRA1-209ENST00000529963 TSPAN10Q9H1Z9 355 aaPredicted RBP8.52□□□□□ -1.05
AMBRA1-209ENST00000529963 DISP1Q96F81 1524 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 A6NJY4 79 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 EPHA4P54764 986 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 ILDR2Q71H61 639 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 GLI2P10070 1586 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 UGGT2Q9NYU1 1516 aa8.51□□□□□ -1.05
AMBRA1-209ENST00000529963 TTLL8A6PVC2 850 aa8.5□□□□□ -1.05
AMBRA1-209ENST00000529963 SCNN1AP37088 669 aa8.5□□□□□ -1.05
AMBRA1-209ENST00000529963 SOS2Q07890 1332 aaPredicted RBP8.5□□□□□ -1.05
AMBRA1-209ENST00000529963 RNF217Q8TC41 542 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 GMPR2Q9P2T1 348 aaKnown RBP8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 PARP3Q9Y6F1 533 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 M0R2N6 131 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 RHOQP17081 205 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 PHKA2P46019 1235 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 RNF144AP50876 292 aaPredicted RBP8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 TMEM214Q6NUQ4 689 aaKnown RBP8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 SLC9A9Q8IVB4 645 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 GRIP2Q9C0E4 1043 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 SCHIP1Q9P0W5 487 aaPredicted RBP8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 USTQ9Y2C2 406 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 KDM5BQ9UGL1 1544 aa8.49□□□□□ -1.05
AMBRA1-209ENST00000529963 KIAA0556O60303 1618 aa8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 EPRSP07814 1512 aaKnown RBP8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 C21orf2O43822 256 aa8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 FOXK2Q01167 660 aa8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 MTFR1Q15390 333 aa8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 SWI5Q1ZZU3 235 aa8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 CLP1Q92989 425 aaKnown RBP8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
AMBRA1-209ENST00000529963 TEX14Q8IWB6 1497 aa8.47□□□□□ -1.05
AMBRA1-209ENST00000529963 POTECB2RU33 542 aa8.47□□□□□ -1.05
AMBRA1-209ENST00000529963 POU4F2Q12837 409 aa8.47□□□□□ -1.05
AMBRA1-209ENST00000529963 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
AMBRA1-209ENST00000529963 IQSEC3Q9UPP2 1182 aaPredicted RBP8.47□□□□□ -1.05
AMBRA1-209ENST00000529963 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms