RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 PAF1Q8N7H5 531 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC148Q8NFR7 591 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 DNAI2Q9GZS0 605 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 ANKRD36BQ8N2N9 1353 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 MAP3K12Q12852 859 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 IFIT5Q13325 482 aaKnown RBP9.9□□□□□ -0.82
CTNND1-221ENST00000529873 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 DZIP1Q86YF9 867 aaKnown RBP9.9□□□□□ -0.82
CTNND1-221ENST00000529873 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
CTNND1-221ENST00000529873 CCDC196A0A1B0GTZ2 297 aa9.9□□□□□ -0.83
CTNND1-221ENST00000529873 EPB41L2O43491 1005 aaKnown RBP9.9□□□□□ -0.83
CTNND1-221ENST00000529873 MCM4P33991 863 aa9.9□□□□□ -0.83
CTNND1-221ENST00000529873 EIF5P55010 431 aaKnown RBP9.9□□□□□ -0.83
CTNND1-221ENST00000529873 THUMPD2Q9BTF0 503 aaKnown RBP9.9□□□□□ -0.83
CTNND1-221ENST00000529873 EHMT1Q9H9B1 1298 aa9.9□□□□□ -0.83
CTNND1-221ENST00000529873 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.83
CTNND1-221ENST00000529873 ABCF2Q9UG63 623 aa9.9□□□□□ -0.83
CTNND1-221ENST00000529873 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 CCDC183Q5T5S1 534 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 CRACR2BQ8N4Y2 399 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 TAF4BQ92750 862 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 NAPBQ9H115 298 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 GBP2P32456 591 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 SSH1Q8WYL5 1049 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 BRPF3Q9ULD4 1205 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 CAMK4Q16566 473 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 GIMAP7Q8NHV1 300 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 AMOTL2Q9Y2J4 779 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 UQCRHP07919 91 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 TTF1Q15361 905 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 LRRFIP2Q9Y608 721 aaKnown RBP9.89□□□□□ -0.83
CTNND1-221ENST00000529873 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
CTNND1-221ENST00000529873 MINDY4BA8MYZ0 360 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 FAM177A1Q8N128 213 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 CUL5Q93034 780 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 EVI5LQ96CN4 794 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 DUOX2Q9NRD8 1548 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 ENOX2Q16206 610 aaKnown RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 RNF41Q9H4P4 317 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 RALGAPBQ86X10 1494 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 ZNF213O14771 459 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 FAM193AP78312 1265 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 ANO10Q9NW15 660 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 CTTNBP2Q8WZ74 1663 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 FKBP15Q5T1M5 1219 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 RPRD2Q5VT52 1461 aaKnown RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 MPRIPQ6WCQ1 1025 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
CTNND1-221ENST00000529873 URB2Q14146 1524 aaKnown RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 DBF4Q9UBU7 674 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-221ENST00000529873 TMEM266Q2M3C6 531 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 TEX13AQ9BXU3 409 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-221ENST00000529873 SYCE3A1L190 88 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-221ENST00000529873 MAP3K2Q9Y2U5 619 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
CTNND1-221ENST00000529873 NEBLO76041 1014 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 CASQ1P31415 396 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-221ENST00000529873 C8orf76Q96K31 380 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 ANKRD62A6NC57 917 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 GOLGA8BA8MQT2 603 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 FGFR1OPO95684 399 aaKnown RBP9.87□□□□□ -0.83
CTNND1-221ENST00000529873 CFAP100Q494V2 611 aa9.87□□□□□ -0.83
CTNND1-221ENST00000529873 A0A087WZG4 1122 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 DHX37Q8IY37 1157 aaKnown RBP9.86□□□□□ -0.83
CTNND1-221ENST00000529873 SCAND2PQ9GZW5 306 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-221ENST00000529873 CCDC8Q9H0W5 538 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-221ENST00000529873 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 IL16Q14005 1332 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 CTAGE5O15320 804 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 SPA17Q15506 151 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 KDM5BQ9UGL1 1544 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 CATIPQ7Z7H3 387 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 IQCA1Q86XH1 822 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 RAB34Q9BZG1 259 aa9.86□□□□□ -0.83
CTNND1-221ENST00000529873 ASXL1Q8IXJ9 1541 aa9.85□□□□□ -0.83
CTNND1-221ENST00000529873 F6X3S4 739 aa9.85□□□□□ -0.83
CTNND1-221ENST00000529873 KRT28Q7Z3Y7 464 aa9.85□□□□□ -0.83
CTNND1-221ENST00000529873 CWC25Q9NXE8 425 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-221ENST00000529873 KIF2AO00139 706 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-221ENST00000529873 ARHGAP29Q52LW3 1261 aa9.85□□□□□ -0.83
CTNND1-221ENST00000529873 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
CTNND1-221ENST00000529873 RANBP6O60518 1105 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms