RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 PDIA6Q15084 440 aa28.95■■■□□ 2.23
LTBP3-214ENST00000529582 CHD1LQ86WJ1 897 aa28.95■■■□□ 2.23
LTBP3-214ENST00000529582 GNAI2P04899 355 aa28.95■■■□□ 2.22
LTBP3-214ENST00000529582 DCTPP1Q9H773 170 aa28.94■■■□□ 2.22
LTBP3-214ENST00000529582 NUTM2BA6NNL0 878 aaPredicted RBP28.93■■■□□ 2.22
LTBP3-214ENST00000529582 NUTM2EB1AL46 878 aaPredicted RBP28.93■■■□□ 2.22
LTBP3-214ENST00000529582 NUTM2AQ8IVF1 878 aaPredicted RBP28.93■■■□□ 2.22
LTBP3-214ENST00000529582 LNPKQ9C0E8 428 aa28.93■■■□□ 2.22
LTBP3-214ENST00000529582 SRCIN1Q9C0H9 1055 aa28.93■■■□□ 2.22
LTBP3-214ENST00000529582 ANKRD45Q5TZF3 282 aa28.93■■■□□ 2.22
LTBP3-214ENST00000529582 BEND3Q5T5X7 828 aa28.92■■■□□ 2.22
LTBP3-214ENST00000529582 USP44Q9H0E7 712 aa28.92■■■□□ 2.22
LTBP3-214ENST00000529582 NWD2Q9ULI1 1742 aa28.92■■■□□ 2.22
LTBP3-214ENST00000529582 USP16Q9Y5T5 823 aa28.91■■■□□ 2.22
LTBP3-214ENST00000529582 KSR2Q6VAB6 950 aa28.91■■■□□ 2.22
LTBP3-214ENST00000529582 KCPQ6ZWJ8 1503 aa28.9■■■□□ 2.22
LTBP3-214ENST00000529582 ITGB4P16144 1822 aa28.89■■■□□ 2.22
LTBP3-214ENST00000529582 MAP3K2Q9Y2U5 619 aa28.89■■■□□ 2.21
LTBP3-214ENST00000529582 HMMRO75330 724 aa28.87■■■□□ 2.21
LTBP3-214ENST00000529582 TNS2Q63HR2 1409 aa28.87■■■□□ 2.21
LTBP3-214ENST00000529582 SPATA31A1Q5TZJ5 1347 aa28.86■■■□□ 2.21
LTBP3-214ENST00000529582 DDX58O95786 925 aaKnown RBP28.86■■■□□ 2.21
LTBP3-214ENST00000529582 UBTFL1P0CB47 393 aaPredicted RBP28.86■■■□□ 2.21
LTBP3-214ENST00000529582 MYL6BP14649 208 aa28.86■■■□□ 2.21
LTBP3-214ENST00000529582 LRRFIP2Q9Y608 721 aaKnown RBP28.86■■■□□ 2.21
LTBP3-214ENST00000529582 SLIT2O94813 1529 aa28.85■■■□□ 2.21
LTBP3-214ENST00000529582 TMOD3Q9NYL9 352 aa28.85■■■□□ 2.21
LTBP3-214ENST00000529582 EXOC5O00471 708 aa28.85■■■□□ 2.21
LTBP3-214ENST00000529582 AIMP1Q12904 312 aaKnown RBP28.85■■■□□ 2.21
LTBP3-214ENST00000529582 LRP6O75581 1613 aa28.84■■■□□ 2.21
LTBP3-214ENST00000529582 ATP8B2P98198 1209 aa28.84■■■□□ 2.21
LTBP3-214ENST00000529582 MYT1Q01538 1121 aa28.84■■■□□ 2.21
LTBP3-214ENST00000529582 LRP10Q7Z4F1 713 aa28.84■■■□□ 2.21
LTBP3-214ENST00000529582 ALDH1L1O75891 902 aa28.83■■■□□ 2.21
LTBP3-214ENST00000529582 ANP32AP39687 249 aaKnown RBP28.83■■■□□ 2.21
LTBP3-214ENST00000529582 XAGE3Q8WTP9 111 aa28.83■■■□□ 2.21
LTBP3-214ENST00000529582 THRAP3Q9Y2W1 955 aaKnown RBP28.83■■■□□ 2.21
LTBP3-214ENST00000529582 NPM2Q86SE8 214 aaKnown RBP28.83■■■□□ 2.2
LTBP3-214ENST00000529582 CERKQ8TCT0 537 aa28.83■■■□□ 2.2
LTBP3-214ENST00000529582 CDCA7Q9BWT1 371 aaPredicted RBP28.83■■■□□ 2.2
LTBP3-214ENST00000529582 JCADQ9P266 1359 aa28.81■■■□□ 2.2
LTBP3-214ENST00000529582 COPS6Q7L5N1 327 aa28.8■■■□□ 2.2
LTBP3-214ENST00000529582 NBPF7P0C2Y1 421 aaPredicted RBP28.8■■■□□ 2.2
LTBP3-214ENST00000529582 PIP4K2AP48426 406 aaPredicted RBP28.8■■■□□ 2.2
LTBP3-214ENST00000529582 ERBB4Q15303 1308 aa28.8■■■□□ 2.2
LTBP3-214ENST00000529582 SPATA31A5Q5VU36 1347 aa28.8■■■□□ 2.2
LTBP3-214ENST00000529582 SPATA31A7Q8IWB4 1347 aa28.8■■■□□ 2.2
LTBP3-214ENST00000529582 RIC3Q7Z5B4 369 aa28.79■■■□□ 2.2
LTBP3-214ENST00000529582 PIGBQ92521 554 aa28.79■■■□□ 2.2
LTBP3-214ENST00000529582 PNMA6EA0A0J9YXQ4 647 aa28.78■■■□□ 2.2
LTBP3-214ENST00000529582 PTCD1O75127 700 aaKnown RBP28.78■■■□□ 2.2
LTBP3-214ENST00000529582 LINS1Q8NG48 757 aa28.78■■■□□ 2.2
LTBP3-214ENST00000529582 ARFGEF2Q9Y6D5 1785 aa28.76■■■□□ 2.2
LTBP3-214ENST00000529582 CWF19L2Q2TBE0 894 aaKnown RBP28.76■■■□□ 2.2
LTBP3-214ENST00000529582 ZBTB47Q9UFB7 747 aaPredicted RBP28.76■■■□□ 2.2
LTBP3-214ENST00000529582 DOT1LQ8TEK3 1739 aa28.75■■■□□ 2.19
LTBP3-214ENST00000529582 NBPF26B4DH59 902 aa28.75■■■□□ 2.19
LTBP3-214ENST00000529582 NBPF14Q5TI25 921 aa28.75■■■□□ 2.19
LTBP3-214ENST00000529582 NBPF10Q6P3W6 841 aaKnown RBP28.75■■■□□ 2.19
LTBP3-214ENST00000529582 NBPF15Q8N660 670 aa28.75■■■□□ 2.19
LTBP3-214ENST00000529582 ASAP1Q9ULH1 1129 aa28.75■■■□□ 2.19
LTBP3-214ENST00000529582 ANKRD13DQ6ZTN6 518 aa28.74■■■□□ 2.19
LTBP3-214ENST00000529582 APBB1O00213 710 aa28.74■■■□□ 2.19
LTBP3-214ENST00000529582 METTL22Q9BUU2 404 aaPredicted RBP28.74■■■□□ 2.19
LTBP3-214ENST00000529582 ATG3Q9NT62 314 aa28.74■■■□□ 2.19
LTBP3-214ENST00000529582 C9orf78Q9NZ63 289 aaPredicted RBP28.74■■■□□ 2.19
LTBP3-214ENST00000529582 BCL9O00512 1426 aa28.74■■■□□ 2.19
LTBP3-214ENST00000529582 KAT6BQ8WYB5 2073 aa28.73■■■□□ 2.19
LTBP3-214ENST00000529582 SMARCA5O60264 1052 aaPredicted RBP28.73■■■□□ 2.19
LTBP3-214ENST00000529582 SEC24BO95487 1268 aa28.73■■■□□ 2.19
LTBP3-214ENST00000529582 DDB1Q16531 1140 aa28.73■■■□□ 2.19
LTBP3-214ENST00000529582 SSH3Q8TE77 659 aa28.73■■■□□ 2.19
LTBP3-214ENST00000529582 CCDC9Q9Y3X0 531 aaKnown RBP28.73■■■□□ 2.19
LTBP3-214ENST00000529582 IGKV5-2P06315 115 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 BARGINQ6ZT62 677 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 IBTKQ9P2D0 1353 aaPredicted RBP28.72■■■□□ 2.19
LTBP3-214ENST00000529582 AFDNP55196 1824 aaKnown RBP28.72■■■□□ 2.19
LTBP3-214ENST00000529582 MSH5O43196 834 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 PPP1R42Q7Z4L9 355 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 UNC5CLQ8IV45 518 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 PLEKHM2Q8IWE5 1019 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 C16orf71Q8IYS4 520 aaPredicted RBP28.72■■■□□ 2.19
LTBP3-214ENST00000529582 EXOC6BQ9Y2D4 811 aa28.72■■■□□ 2.19
LTBP3-214ENST00000529582 A1BGP04217 495 aa28.71■■■□□ 2.19
LTBP3-214ENST00000529582 NEXNQ0ZGT2 675 aa28.71■■■□□ 2.19
LTBP3-214ENST00000529582 POLA2Q14181 598 aa28.71■■■□□ 2.19
LTBP3-214ENST00000529582 BMP2KLQ5H9B9 411 aa28.71■■■□□ 2.19
LTBP3-214ENST00000529582 UTYO14607 1347 aa28.71■■■□□ 2.19
LTBP3-214ENST00000529582 MYD88Q99836 296 aa28.7■■■□□ 2.19
LTBP3-214ENST00000529582 VSIG10Q8N0Z9 540 aa28.7■■■□□ 2.18
LTBP3-214ENST00000529582 C8orf37Q96NL8 207 aa28.7■■■□□ 2.18
LTBP3-214ENST00000529582 NUP188Q5SRE5 1749 aa28.69■■■□□ 2.18
LTBP3-214ENST00000529582 NEURL1BA8MQ27 555 aa28.69■■■□□ 2.18
LTBP3-214ENST00000529582 GRM8O00222 908 aa28.69■■■□□ 2.18
LTBP3-214ENST00000529582 NGLY1Q96IV0 654 aa28.69■■■□□ 2.18
LTBP3-214ENST00000529582 IPO9Q96P70 1041 aaKnown RBP28.69■■■□□ 2.18
LTBP3-214ENST00000529582 BCL9LQ86UU0 1499 aa28.68■■■□□ 2.18
LTBP3-214ENST00000529582 HDAC5Q9UQL6 1122 aa28.68■■■□□ 2.18
LTBP3-214ENST00000529582 PLBD2Q8NHP8 589 aa28.68■■■□□ 2.18
LTBP3-214ENST00000529582 OTUD7AQ8TE49 926 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms