RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 ARHGAP27Q6ZUM4 889 aa27.8■■■□□ 2.04
SF3B2-207ENST00000529577 HSPA6P17066 643 aa27.78■■■□□ 2.04
SF3B2-207ENST00000529577 NPC1L1Q9UHC9 1359 aa27.77■■■□□ 2.04
SF3B2-207ENST00000529577 IL17REQ8NFR9 667 aa27.77■■■□□ 2.04
SF3B2-207ENST00000529577 SBF1O95248 1867 aa27.76■■■□□ 2.04
SF3B2-207ENST00000529577 COL15A1P39059 1388 aa27.76■■■□□ 2.03
SF3B2-207ENST00000529577 CNGB1Q14028 1251 aaPredicted RBP27.76■■■□□ 2.03
SF3B2-207ENST00000529577 NFIXQ14938 502 aa27.76■■■□□ 2.03
SF3B2-207ENST00000529577 NMRK2Q9NPI5 230 aa27.76■■■□□ 2.03
SF3B2-207ENST00000529577 DLEC1Q9Y238 1755 aa27.74■■■□□ 2.03
SF3B2-207ENST00000529577 PIM2Q9P1W9 311 aa27.74■■■□□ 2.03
SF3B2-207ENST00000529577 NARFQ9UHQ1 456 aa27.74■■■□□ 2.03
SF3B2-207ENST00000529577 CARMIL3Q8ND23 1372 aa27.73■■■□□ 2.03
SF3B2-207ENST00000529577 C9orf131Q5VYM1 1079 aa27.73■■■□□ 2.03
SF3B2-207ENST00000529577 PRELPP51888 382 aa27.72■■■□□ 2.03
SF3B2-207ENST00000529577 VSIG10Q8N0Z9 540 aa27.71■■■□□ 2.03
SF3B2-207ENST00000529577 ZNF496Q96IT1 587 aaPredicted RBP27.71■■■□□ 2.03
SF3B2-207ENST00000529577 ZPR1O75312 459 aa27.7■■■□□ 2.02
SF3B2-207ENST00000529577 PHACTR3Q96KR7 559 aa27.7■■■□□ 2.02
SF3B2-207ENST00000529577 ANKRD31Q8N7Z5 1873 aa27.7■■■□□ 2.02
SF3B2-207ENST00000529577 EIF5P55010 431 aaKnown RBP27.69■■■□□ 2.02
SF3B2-207ENST00000529577 DALRD3Q5D0E6 543 aaKnown RBP27.69■■■□□ 2.02
SF3B2-207ENST00000529577 KCNQ3O43525 872 aa27.68■■■□□ 2.02
SF3B2-207ENST00000529577 CANXP27824 592 aaKnown RBP27.68■■■□□ 2.02
SF3B2-207ENST00000529577 SCN7AQ01118 1682 aa27.68■■■□□ 2.02
SF3B2-207ENST00000529577 U2SURPO15042 1029 aaKnown RBP27.67■■■□□ 2.02
SF3B2-207ENST00000529577 CEMIPQ8WUJ3 1361 aa27.66■■■□□ 2.02
SF3B2-207ENST00000529577 HEG1Q9ULI3 1381 aa27.65■■■□□ 2.02
SF3B2-207ENST00000529577 SERPINB2P05120 415 aa27.65■■■□□ 2.02
SF3B2-207ENST00000529577 COL11A2P13942 1736 aaPredicted RBP27.64■■■□□ 2.02
SF3B2-207ENST00000529577 GNAT3A8MTJ3 354 aa27.64■■■□□ 2.02
SF3B2-207ENST00000529577 RASSF7Q02833 373 aa27.64■■■□□ 2.02
SF3B2-207ENST00000529577 ZNF790Q6PG37 636 aa27.64■■■□□ 2.02
SF3B2-207ENST00000529577 RSPH6AQ9H0K4 717 aa27.64■■■□□ 2.02
SF3B2-207ENST00000529577 TOMM70O94826 608 aa27.63■■■□□ 2.01
SF3B2-207ENST00000529577 RNF181Q9P0P0 153 aa27.62■■■□□ 2.01
SF3B2-207ENST00000529577 TBC1D9BQ66K14 1250 aa27.61■■■□□ 2.01
SF3B2-207ENST00000529577 DNAJC5GQ8N7S2 189 aa27.61■■■□□ 2.01
SF3B2-207ENST00000529577 GAS2L2Q8NHY3 880 aa27.6■■■□□ 2.01
SF3B2-207ENST00000529577 PRAMEF22A3QJZ6 481 aa27.59■■■□□ 2.01
SF3B2-207ENST00000529577 A1BGP04217 495 aa27.59■■■□□ 2.01
SF3B2-207ENST00000529577 PRKAR2BP31323 418 aa27.59■■■□□ 2.01
SF3B2-207ENST00000529577 BICDL1Q6ZP65 573 aa27.59■■■□□ 2.01
SF3B2-207ENST00000529577 CCDC24Q8N4L8 307 aa27.59■■■□□ 2.01
SF3B2-207ENST00000529577 BCORQ6W2J9 1755 aa27.58■■■□□ 2.01
SF3B2-207ENST00000529577 CCDC88AQ3V6T2 1871 aa27.58■■■□□ 2.01
SF3B2-207ENST00000529577 TTC5Q8N0Z6 440 aa27.58■■■□□ 2.01
SF3B2-207ENST00000529577 TBC1D2BQ9UPU7 963 aa27.58■■■□□ 2.01
SF3B2-207ENST00000529577 TEFQ10587 303 aa27.57■■■□□ 2
SF3B2-207ENST00000529577 WDR90Q96KV7 1748 aa27.56■■■□□ 2
SF3B2-207ENST00000529577 STARD3NLO95772 234 aa27.56■■■□□ 2
SF3B2-207ENST00000529577 C2CD5Q86YS7 1000 aa27.56■■■□□ 2
SF3B2-207ENST00000529577 TNRC6CQ9HCJ0 1690 aaKnown RBP27.56■■■□□ 2
SF3B2-207ENST00000529577 NFKBIEO00221 500 aa27.55■■■□□ 2
SF3B2-207ENST00000529577 PPP2R1AP30153 589 aa27.55■■■□□ 2
SF3B2-207ENST00000529577 PIP4K2AP48426 406 aaPredicted RBP27.55■■■□□ 2
SF3B2-207ENST00000529577 HTRA3P83110 453 aa27.55■■■□□ 2
SF3B2-207ENST00000529577 TIAM2Q8IVF5 1701 aa27.55■■■□□ 2
SF3B2-207ENST00000529577 CAMTA2O94983 1202 aa27.54■■■□□ 2
SF3B2-207ENST00000529577 RRAGCQ9HB90 399 aa27.54■■■□□ 2
SF3B2-207ENST00000529577 USP16Q9Y5T5 823 aa27.54■■■□□ 2
SF3B2-207ENST00000529577 PRR5LQ6MZQ0 368 aa27.53■■■□□ 2
SF3B2-207ENST00000529577 RBM46Q8TBY0 533 aaKnown RBP27.53■■■□□ 2
SF3B2-207ENST00000529577 IL6STP40189 918 aaPredicted RBP27.52■■■□□ 2
SF3B2-207ENST00000529577 IFFO2Q5TF58 517 aa27.52■■■□□ 2
SF3B2-207ENST00000529577 APLP1P51693 650 aa27.51■■□□□ 1.99
SF3B2-207ENST00000529577 MCM10Q7L590 875 aa27.51■■□□□ 1.99
SF3B2-207ENST00000529577 TTLL6Q8N841 843 aa27.51■■□□□ 1.99
SF3B2-207ENST00000529577 FMNL2Q96PY5 1086 aa27.51■■□□□ 1.99
SF3B2-207ENST00000529577 A0A087WZG4 1122 aa27.5■■□□□ 1.99
SF3B2-207ENST00000529577 BTBD11A6QL63 1104 aa27.5■■□□□ 1.99
SF3B2-207ENST00000529577 DCTN1Q14203 1278 aa27.5■■□□□ 1.99
SF3B2-207ENST00000529577 FER1L6Q2WGJ9 1857 aa27.5■■□□□ 1.99
SF3B2-207ENST00000529577 TEX13AQ9BXU3 409 aaPredicted RBP27.49■■□□□ 1.99
SF3B2-207ENST00000529577 ZNF330Q9Y3S2 320 aaPredicted RBP27.49■■□□□ 1.99
SF3B2-207ENST00000529577 SLX4Q8IY92 1834 aa27.48■■□□□ 1.99
SF3B2-207ENST00000529577 CACNA1SQ13698 1873 aa27.48■■□□□ 1.99
SF3B2-207ENST00000529577 H0YIN7 160 aa27.47■■□□□ 1.99
SF3B2-207ENST00000529577 KDM2BQ8NHM5 1336 aa27.46■■□□□ 1.99
SF3B2-207ENST00000529577 POTECB2RU33 542 aa27.46■■□□□ 1.99
SF3B2-207ENST00000529577 NBPF26B4DH59 902 aa27.46■■□□□ 1.99
SF3B2-207ENST00000529577 LMNB1P20700 586 aa27.46■■□□□ 1.99
SF3B2-207ENST00000529577 NBPF10Q6P3W6 841 aaKnown RBP27.46■■□□□ 1.99
SF3B2-207ENST00000529577 NBPF15Q8N660 670 aa27.46■■□□□ 1.99
SF3B2-207ENST00000529577 BRIP1Q9BX63 1249 aa27.46■■□□□ 1.99
SF3B2-207ENST00000529577 U2AF1L5P0DN76 240 aaPredicted RBP27.45■■□□□ 1.98
SF3B2-207ENST00000529577 U2AF1Q01081 240 aaKnown RBP eCLIP27.45■■□□□ 1.98
SF3B2-207ENST00000529577 DLG5Q8TDM6 1919 aa27.45■■□□□ 1.98
SF3B2-207ENST00000529577 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.98
SF3B2-207ENST00000529577 ARFGEF2Q9Y6D5 1785 aa27.44■■□□□ 1.98
SF3B2-207ENST00000529577 PCNTO95613 3336 aa27.44■■□□□ 1.98
SF3B2-207ENST00000529577 C21orf2O43822 256 aa27.43■■□□□ 1.98
SF3B2-207ENST00000529577 CFAP53Q96M91 514 aa27.43■■□□□ 1.98
SF3B2-207ENST00000529577 ZNF219Q9P2Y4 722 aaPredicted RBP27.43■■□□□ 1.98
SF3B2-207ENST00000529577 GLTPD2A6NH11 291 aa27.42■■□□□ 1.98
SF3B2-207ENST00000529577 DZIP3Q86Y13 1208 aaKnown RBP27.42■■□□□ 1.98
SF3B2-207ENST00000529577 ZNF622Q969S3 477 aaKnown RBP eCLIP27.42■■□□□ 1.98
SF3B2-207ENST00000529577 ZC3H4Q9UPT8 1303 aaKnown RBP27.41■■□□□ 1.98
SF3B2-207ENST00000529577 FSTL1Q12841 308 aa27.41■■□□□ 1.98
SF3B2-207ENST00000529577 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms