RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 METTL24Q5JXM2 366 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 FOXD4L5Q5VV16 416 aaPredicted RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 KSR2Q6VAB6 950 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 CABLES1Q8TDN4 633 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 FOXD4L4Q8WXT5 416 aaPredicted RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 TRMT112Q9UI30 125 aaKnown RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 BRPF1P55201 1214 aaPredicted RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 KIAA2012Q0VF49 1180 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 ROBO2Q9HCK4 1378 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 ADGRB3O60242 1522 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 ANKRD18BA2A2Z9 1011 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 PPP1R42Q7Z4L9 355 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 ANKARQ7Z5J8 1434 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 DIP2CQ9Y2E4 1556 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 VPS37CA5D8V6 355 aaPredicted RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 ZSCAN31Q96LW9 406 aaPredicted RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 CHPF2Q9P2E5 772 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 TRPM1Q7Z4N2 1603 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 BMP2KLQ5H9B9 411 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 ANKRD44Q8N8A2 993 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 BRMS1Q9HCU9 246 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 RTL1A6NKG5 1358 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 TMEM94Q12767 1356 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 CHL1O00533 1208 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 FKBP4Q02790 459 aaKnown RBP eCLIP5.59□□□□□ -1.51
CASP4-207ENST00000529565 LINS1Q8NG48 757 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 ZBTB3Q9H5J0 574 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 HOOK1Q9UJC3 728 aaKnown RBP5.59□□□□□ -1.51
CASP4-207ENST00000529565 NUTM1Q86Y26 1132 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 XAGE3Q8WTP9 111 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 CDC5LQ99459 802 aaKnown RBP5.59□□□□□ -1.51
CASP4-207ENST00000529565 CTDP1Q9Y5B0 961 aaPredicted RBP5.59□□□□□ -1.51
CASP4-207ENST00000529565 SETBP1Q9Y6X0 1596 aa5.59□□□□□ -1.51
CASP4-207ENST00000529565 USP6P35125 1406 aa5.59□□□□□ -1.52
CASP4-207ENST00000529565 K7ELQ4 463 aaPredicted RBP5.59□□□□□ -1.52
CASP4-207ENST00000529565 SLC5A1P13866 664 aa5.59□□□□□ -1.52
CASP4-207ENST00000529565 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.52
CASP4-207ENST00000529565 CIZ1Q9ULV3 898 aaPredicted RBP5.59□□□□□ -1.52
CASP4-207ENST00000529565 E9PCH4 1651 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 CAMSAP1Q5T5Y3 1602 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 CAVIN4Q5BKX8 364 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 BLOC1S2Q6QNY1 142 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 BICDL1Q6ZP65 573 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 NFATC2IPQ8NCF5 419 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 KIAA0232Q92628 1395 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 GRM8O00222 908 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 ATP8B2P98198 1209 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 COPS6Q7L5N1 327 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 UBE3BQ7Z3V4 1068 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 CCDC47Q96A33 483 aaKnown RBP5.58□□□□□ -1.52
CASP4-207ENST00000529565 AK7Q96M32 723 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 DDX21Q9NR30 783 aaKnown RBP eCLIP5.58□□□□□ -1.52
CASP4-207ENST00000529565 TRIM35Q9UPQ4 493 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 LAMC1P11047 1609 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 NUCB1Q02818 461 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 SLC39A6Q13433 755 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 CWC27Q6UX04 472 aaKnown RBP5.58□□□□□ -1.52
CASP4-207ENST00000529565 EVI5LQ96CN4 794 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 BTG4Q9NY30 223 aa5.58□□□□□ -1.52
CASP4-207ENST00000529565 ZC3H13Q5T200 1668 aaKnown RBP5.58□□□□□ -1.52
CASP4-207ENST00000529565 CCDC73Q6ZRK6 1079 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 MEIS3Q99687 375 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 LRP2BPQ9P2M1 347 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 CEP152O94986 1710 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 MADDQ8WXG6 1647 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 ALKQ9UM73 1620 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 SMARCA5O60264 1052 aaPredicted RBP5.57□□□□□ -1.52
CASP4-207ENST00000529565 MBD3O95983 291 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 TSPYL6Q8N831 410 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 BICD2Q8TD16 824 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 GOLGA6L19H0YKK7 550 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 MAP4K4O95819 1239 aaPredicted RBP5.57□□□□□ -1.52
CASP4-207ENST00000529565 GSE1Q14687 1217 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 C8orf37Q96NL8 207 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 RAI14Q9P0K7 980 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 U3KPZ7 1027 aaPredicted RBP5.57□□□□□ -1.52
CASP4-207ENST00000529565 ATP5J2-PTCD1G3V325 749 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 ATP6V1AP38606 617 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 MAP3K12Q12852 859 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 TTF1Q15361 905 aaPredicted RBP5.57□□□□□ -1.52
CASP4-207ENST00000529565 IMMTQ16891 758 aaKnown RBP5.57□□□□□ -1.52
CASP4-207ENST00000529565 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 NBPF6Q5VWK0 638 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 ZNF790Q6PG37 636 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 RHPN1Q8TCX5 695 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 AIDAQ96BJ3 306 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 NBPF4Q96M43 638 aa5.57□□□□□ -1.52
CASP4-207ENST00000529565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.57□□□□□ -1.52
CASP4-207ENST00000529565 WDR33Q9C0J8 1336 aaKnown RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 BECN2A8MW95 431 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 IDH1O75874 414 aaKnown RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 CDKL5O76039 1030 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 IGHDP01880 384 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 GPTP24298 496 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 LDHAL6AQ6ZMR3 332 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 CCDC85AQ96PX6 553 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 ZBTB40Q9NUA8 1239 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 PDRG1Q9NUG6 133 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 PPRC1Q5VV67 1664 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms