RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
GPATCH4-214ENST00000529520 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
GPATCH4-214ENST00000529520 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
GPATCH4-214ENST00000529520 FCHSD2O94868 740 aa11.06□□□□□ -0.64
GPATCH4-214ENST00000529520 CHRNA5P30532 468 aa11.06□□□□□ -0.64
GPATCH4-214ENST00000529520 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
GPATCH4-214ENST00000529520 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
GPATCH4-214ENST00000529520 KCNQ3O43525 872 aa11.05□□□□□ -0.64
GPATCH4-214ENST00000529520 CANXP27824 592 aaKnown RBP11.05□□□□□ -0.64
GPATCH4-214ENST00000529520 NFIXQ14938 502 aa11.05□□□□□ -0.64
GPATCH4-214ENST00000529520 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
GPATCH4-214ENST00000529520 COL15A1P39059 1388 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 ANKRD31Q8N7Z5 1873 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 KIF3CO14782 793 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 ZPR1O75312 459 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
GPATCH4-214ENST00000529520 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
GPATCH4-214ENST00000529520 PPP2R1AP30153 589 aa11.03□□□□□ -0.64
GPATCH4-214ENST00000529520 PRKAR2BP31323 418 aa11.03□□□□□ -0.64
GPATCH4-214ENST00000529520 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
GPATCH4-214ENST00000529520 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
GPATCH4-214ENST00000529520 PIM2Q9P1W9 311 aa11.03□□□□□ -0.64
GPATCH4-214ENST00000529520 CACNA1SQ13698 1873 aa11.02□□□□□ -0.64
GPATCH4-214ENST00000529520 EIF5P55010 431 aaKnown RBP11.02□□□□□ -0.65
GPATCH4-214ENST00000529520 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
GPATCH4-214ENST00000529520 HEG1Q9ULI3 1381 aa11.02□□□□□ -0.65
GPATCH4-214ENST00000529520 PRAMEF22A3QJZ6 481 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 A1BGP04217 495 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 SERPINB2P05120 415 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 TEFQ10587 303 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 DALRD3Q5D0E6 543 aaKnown RBP11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 C9orf131Q5VYM1 1079 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 CEMIPQ8WUJ3 1361 aa11.01□□□□□ -0.65
GPATCH4-214ENST00000529520 PIP4K2AP48426 406 aaPredicted RBP11□□□□□ -0.65
GPATCH4-214ENST00000529520 PRELPP51888 382 aa11□□□□□ -0.65
GPATCH4-214ENST00000529520 DCTN1Q14203 1278 aa11□□□□□ -0.65
GPATCH4-214ENST00000529520 TBC1D9BQ66K14 1250 aa11□□□□□ -0.65
GPATCH4-214ENST00000529520 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
GPATCH4-214ENST00000529520 NMRK2Q9NPI5 230 aa11□□□□□ -0.65
GPATCH4-214ENST00000529520 USP16Q9Y5T5 823 aa11□□□□□ -0.65
GPATCH4-214ENST00000529520 SCN7AQ01118 1682 aa10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 BTBD11A6QL63 1104 aa10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 STARD3NLO95772 234 aa10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 MCM10Q7L590 875 aa10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
GPATCH4-214ENST00000529520 COL11A2P13942 1736 aaPredicted RBP10.98□□□□□ -0.65
GPATCH4-214ENST00000529520 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
GPATCH4-214ENST00000529520 HSPA6P17066 643 aa10.98□□□□□ -0.65
GPATCH4-214ENST00000529520 RASSF7Q02833 373 aa10.98□□□□□ -0.65
GPATCH4-214ENST00000529520 CFAP53Q96M91 514 aa10.98□□□□□ -0.65
GPATCH4-214ENST00000529520 C2CD5Q86YS7 1000 aa10.97□□□□□ -0.65
GPATCH4-214ENST00000529520 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
GPATCH4-214ENST00000529520 MIS18AQ9NYP9 233 aa10.97□□□□□ -0.65
GPATCH4-214ENST00000529520 SLX4Q8IY92 1834 aa10.97□□□□□ -0.65
GPATCH4-214ENST00000529520 FER1L6Q2WGJ9 1857 aa10.97□□□□□ -0.65
GPATCH4-214ENST00000529520 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
GPATCH4-214ENST00000529520 A0A087WZG4 1122 aa10.96□□□□□ -0.65
GPATCH4-214ENST00000529520 CAMTA2O94983 1202 aa10.96□□□□□ -0.65
GPATCH4-214ENST00000529520 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
GPATCH4-214ENST00000529520 TEX13AQ9BXU3 409 aaPredicted RBP10.96□□□□□ -0.65
GPATCH4-214ENST00000529520 RNF181Q9P0P0 153 aa10.96□□□□□ -0.65
GPATCH4-214ENST00000529520 NUDCQ9Y266 331 aa10.96□□□□□ -0.65
GPATCH4-214ENST00000529520 TOMM70O94826 608 aa10.95□□□□□ -0.66
GPATCH4-214ENST00000529520 PRR5LQ6MZQ0 368 aa10.95□□□□□ -0.66
GPATCH4-214ENST00000529520 RRAGCQ9HB90 399 aa10.95□□□□□ -0.66
GPATCH4-214ENST00000529520 NUP98P52948 1817 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 NBPF26B4DH59 902 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 H0YIN7 160 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 NBPF15Q8N660 670 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 TTLL6Q8N841 843 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 KDM3BQ7LBC6 1761 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 TIAM2Q8IVF5 1701 aa10.94□□□□□ -0.66
GPATCH4-214ENST00000529520 NFKBIEO00221 500 aa10.93□□□□□ -0.66
GPATCH4-214ENST00000529520 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-214ENST00000529520 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-214ENST00000529520 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.668e-7■■■□□ 14.9
GPATCH4-214ENST00000529520 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
GPATCH4-214ENST00000529520 ARFGEF2Q9Y6D5 1785 aa10.93□□□□□ -0.66
GPATCH4-214ENST00000529520 TNRC6CQ9HCJ0 1690 aaKnown RBP10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 C21orf2O43822 256 aa10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 HTRA3P83110 453 aa10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 DNAJC5GQ8N7S2 189 aa10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 SETDB2Q96T68 719 aa10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 BRIP1Q9BX63 1249 aa10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 LAMB4A4D0S4 1761 aa10.92□□□□□ -0.66
GPATCH4-214ENST00000529520 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms