RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
CHRNA6-202ENST00000529467 CRKLP46109 303 aaKnown RBP8.49□□□□□ -1.05
CHRNA6-202ENST00000529467 APLP1P51693 650 aa8.49□□□□□ -1.05
CHRNA6-202ENST00000529467 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
CHRNA6-202ENST00000529467 NMRK2Q9NPI5 230 aa8.49□□□□□ -1.05
CHRNA6-202ENST00000529467 SRP68Q9UHB9 627 aaKnown RBP8.49□□□□□ -1.05
CHRNA6-202ENST00000529467 TM4SF1P30408 202 aa8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 DDR1Q08345 913 aa8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 FKBP8Q14318 412 aa8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 C9orf131Q5VYM1 1079 aa8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 INTS5Q6P9B9 1019 aaKnown RBP8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 PIM2Q9P1W9 311 aa8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 SBF1O95248 1867 aa8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 USP42Q9H9J4 1324 aaKnown RBP8.48□□□□□ -1.05
CHRNA6-202ENST00000529467 HSPA5P11021 654 aaKnown RBP8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 IL13P35225 146 aa8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 SULT6B1Q6IMI4 303 aa8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 SCN11AQ9UI33 1791 aa8.47□□□□□ -1.05
CHRNA6-202ENST00000529467 POLRMTO00411 1230 aaKnown RBP8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 CHRNA5P30532 468 aa8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 EIF4G2P78344 907 aaKnown RBP eCLIP8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 DALRD3Q5D0E6 543 aaKnown RBP8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 LGR6Q9HBX8 967 aa8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 ADAMTS7Q9UKP4 1686 aa8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 TJP1Q07157 1748 aa8.46□□□□□ -1.06
CHRNA6-202ENST00000529467 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
CHRNA6-202ENST00000529467 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
CHRNA6-202ENST00000529467 DNAJC10Q8IXB1 793 aa8.45□□□□□ -1.06
CHRNA6-202ENST00000529467 SLC52A2Q9HAB3 445 aa8.45□□□□□ -1.06
CHRNA6-202ENST00000529467 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
CHRNA6-202ENST00000529467 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
CHRNA6-202ENST00000529467 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 ZPR1O75312 459 aa8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 CYP19A1P11511 503 aaPredicted RBP8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 PRKAR2AP13861 404 aaKnown RBP8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 FSTL1Q12841 308 aa8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 SLC39A6Q13433 755 aa8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 RNF181Q9P0P0 153 aa8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 NARFQ9UHQ1 456 aa8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 VIRMAQ69YN4 1812 aaKnown RBP8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 SOS1Q07889 1333 aaPredicted RBP8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 KCPQ6ZWJ8 1503 aa8.44□□□□□ -1.06
CHRNA6-202ENST00000529467 WDR90Q96KV7 1748 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 CCDC88AQ3V6T2 1871 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 HTRA3P83110 453 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 EVX2Q03828 476 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 NFIXQ14938 502 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 C16orf71Q8IYS4 520 aaPredicted RBP8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 KLRG1Q96E93 195 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 KNSTRNQ9Y448 316 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
CHRNA6-202ENST00000529467 SERPINB2P05120 415 aa8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 PRELPP51888 382 aa8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 AMER1Q5JTC6 1135 aaPredicted RBP8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 JMYQ8N9B5 988 aa8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 ZBTB1Q9Y2K1 713 aa8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 NRXN2Q9P2S2 1712 aa8.42□□□□□ -1.06
CHRNA6-202ENST00000529467 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
CHRNA6-202ENST00000529467 C19orf67A6NJJ6 358 aa8.41□□□□□ -1.06
CHRNA6-202ENST00000529467 HMOX1P09601 288 aa8.41□□□□□ -1.06
CHRNA6-202ENST00000529467 RASSF7Q02833 373 aa8.41□□□□□ -1.06
CHRNA6-202ENST00000529467 MTHFSDQ2M296 383 aaKnown RBP8.41□□□□□ -1.06
CHRNA6-202ENST00000529467 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
CHRNA6-202ENST00000529467 MRC1P22897 1456 aa8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 COL15A1P39059 1388 aa8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 GLTPD2A6NH11 291 aa8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 PER1O15534 1290 aaPredicted RBP8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 LMNB1P20700 586 aa8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 EIF5P55010 431 aaKnown RBP8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 TTLL6Q8N841 843 aa8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 SMC1BQ8NDV3 1235 aa8.4□□□□□ -1.06
CHRNA6-202ENST00000529467 TNRC6CQ9HCJ0 1690 aaKnown RBP8.4□□□□□ -1.07
CHRNA6-202ENST00000529467 POTECB2RU33 542 aa8.39□□□□□ -1.07
CHRNA6-202ENST00000529467 VEGFAP15692 232 aaPredicted RBP8.39□□□□□ -1.07
CHRNA6-202ENST00000529467 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
CHRNA6-202ENST00000529467 COL13A1Q5TAT6 717 aaPredicted RBP8.39□□□□□ -1.07
CHRNA6-202ENST00000529467 C2CD5Q86YS7 1000 aa8.39□□□□□ -1.07
CHRNA6-202ENST00000529467 DLEC1Q9Y238 1755 aa8.39□□□□□ -1.07
CHRNA6-202ENST00000529467 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
CHRNA6-202ENST00000529467 H0YIN7 160 aa8.38□□□□□ -1.07
CHRNA6-202ENST00000529467 NFKBIEO00221 500 aa8.38□□□□□ -1.07
CHRNA6-202ENST00000529467 DIAPH1O60610 1272 aaKnown RBP8.38□□□□□ -1.07
CHRNA6-202ENST00000529467 BICDL1Q6ZP65 573 aa8.38□□□□□ -1.07
CHRNA6-202ENST00000529467 IL17REQ8NFR9 667 aa8.38□□□□□ -1.07
CHRNA6-202ENST00000529467 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 DICER1Q9UPY3 1922 aaKnown RBP8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 ANKRD31Q8N7Z5 1873 aa8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 A0A087WZG4 1122 aa8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 STARD3NLO95772 234 aa8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 TBC1D9BQ66K14 1250 aa8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 ZNF496Q96IT1 587 aaPredicted RBP8.37□□□□□ -1.07
CHRNA6-202ENST00000529467 FER1L6Q2WGJ9 1857 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 KIF7Q2M1P5 1343 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms