RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 PNNQ9H307 717 aaKnown RBP10.46□□□□□ -0.73
CCDC90B-212ENST00000529312 CCDC87Q9NVE4 849 aa10.46□□□□□ -0.73
CCDC90B-212ENST00000529312 NPM2Q86SE8 214 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-212ENST00000529312 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-212ENST00000529312 A0A087WZG4 1122 aa10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 U2AF1L5P0DN76 240 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 PPP2R1AP30153 589 aa10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 U2AF1Q01081 240 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 SMIM5Q71RC9 77 aa10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 AMIGO3Q86WK7 504 aa10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-212ENST00000529312 KDM6AO15550 1401 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 HTATSF1O43719 755 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 GYS1P13807 737 aa10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 INTS5Q6P9B9 1019 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 DNAJC10Q8IXB1 793 aa10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 IL17REQ8NFR9 667 aa10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 C4BP0C0L5 1744 aa10.43□□□□□ -0.74
CCDC90B-212ENST00000529312 C5P01031 1676 aa10.42□□□□□ -0.74
CCDC90B-212ENST00000529312 CYP19A1P11511 503 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-212ENST00000529312 YBX3P16989 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC90B-212ENST00000529312 PRKAR2BP31323 418 aa10.42□□□□□ -0.74
CCDC90B-212ENST00000529312 ZNF790Q6PG37 636 aa10.41□□□□□ -0.74
CCDC90B-212ENST00000529312 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-212ENST00000529312 FMNL2Q96PY5 1086 aa10.41□□□□□ -0.74
CCDC90B-212ENST00000529312 NARFQ9UHQ1 456 aa10.41□□□□□ -0.74
CCDC90B-212ENST00000529312 TAF1LQ8IZX4 1826 aa10.41□□□□□ -0.74
CCDC90B-212ENST00000529312 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
CCDC90B-212ENST00000529312 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
CCDC90B-212ENST00000529312 TM4SF1P30408 202 aa10.4□□□□□ -0.74
CCDC90B-212ENST00000529312 PHACTR3Q96KR7 559 aa10.4□□□□□ -0.74
CCDC90B-212ENST00000529312 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
CCDC90B-212ENST00000529312 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
CCDC90B-212ENST00000529312 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.74
CCDC90B-212ENST00000529312 USP42Q9H9J4 1324 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 A0A0G2JLW4 131 aa10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 CANXP27824 592 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 FKBP8Q14318 412 aa10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 RALBP1Q15311 655 aa10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 CHD4Q14839 1912 aa10.39□□□□□ -0.75
CCDC90B-212ENST00000529312 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 USPL1Q5W0Q7 1092 aa10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 ARHGAP27Q6ZUM4 889 aa10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 PNISRQ8TF01 805 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 ZNF496Q96IT1 587 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 SRP68Q9UHB9 627 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 PDZRN3Q9UPQ7 1066 aa10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 BCS1LQ9Y276 419 aa10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 UBR3Q6ZT12 1888 aa10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 ZNF831Q5JPB2 1677 aa10.38□□□□□ -0.75
CCDC90B-212ENST00000529312 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 SNRPA1P09661 255 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 DPEP1P16444 411 aa10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 IL6STP40189 918 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 EIF5P55010 431 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 DALRD3Q5D0E6 543 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
CCDC90B-212ENST00000529312 SERPINB2P05120 415 aa10.36□□□□□ -0.75
CCDC90B-212ENST00000529312 C1QTNF8P60827 252 aa10.36□□□□□ -0.75
CCDC90B-212ENST00000529312 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-212ENST00000529312 ZBTB1Q9Y2K1 713 aa10.36□□□□□ -0.75
CCDC90B-212ENST00000529312 HEG1Q9ULI3 1381 aa10.36□□□□□ -0.75
CCDC90B-212ENST00000529312 POTEMA6NI47 508 aa10.35□□□□□ -0.75
CCDC90B-212ENST00000529312 POLRMTO00411 1230 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-212ENST00000529312 NFIXQ14938 502 aa10.35□□□□□ -0.75
CCDC90B-212ENST00000529312 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
CCDC90B-212ENST00000529312 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 H0YIN7 160 aa10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 CLEC4GQ6UXB4 293 aa10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 MCM10Q7L590 875 aa10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 WWC3Q9ULE0 1092 aa10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-212ENST00000529312 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 NPHP1O15259 732 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 A1BGP04217 495 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 KCNA3P22001 575 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 PDE6BP35913 854 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 DDR1Q08345 913 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 DDX10Q13206 875 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 PCDH10Q9P2E7 1040 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 USP16Q9Y5T5 823 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 COL15A1P39059 1388 aa10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 COL3A1P02461 1466 aaPredicted RBP10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 MYH14Q7Z406 1995 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-212ENST00000529312 RGL2O15211 777 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 KCNQ3O43525 872 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 NFE2L2Q16236 605 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 BICDL1Q6ZP65 573 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 BRIP1Q9BX63 1249 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 ZNF652Q9Y2D9 606 aa10.32□□□□□ -0.76
CCDC90B-212ENST00000529312 MRC1P22897 1456 aa10.31□□□□□ -0.76
CCDC90B-212ENST00000529312 DCTN1Q14203 1278 aa10.31□□□□□ -0.76
CCDC90B-212ENST00000529312 TPTE2Q6XPS3 522 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms