RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
HIF3A-212ENST00000529205 SOS1Q07889 1333 aaPredicted RBP18.37■□□□□ 0.53
HIF3A-212ENST00000529205 H0YIN7 160 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 SERPINB2P05120 415 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 CYP19A1P11511 503 aaPredicted RBP18.36■□□□□ 0.53
HIF3A-212ENST00000529205 IL13P35225 146 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 RASSF7Q02833 373 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 TJP1Q07157 1748 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 NFIXQ14938 502 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 DPY19L2Q6NUT2 758 aa18.36■□□□□ 0.53
HIF3A-212ENST00000529205 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
HIF3A-212ENST00000529205 TNS4Q8IZW8 715 aa18.35■□□□□ 0.53
HIF3A-212ENST00000529205 COL15A1P39059 1388 aa18.34■□□□□ 0.53
HIF3A-212ENST00000529205 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
HIF3A-212ENST00000529205 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
HIF3A-212ENST00000529205 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
HIF3A-212ENST00000529205 VSIG10Q8N0Z9 540 aa18.34■□□□□ 0.53
HIF3A-212ENST00000529205 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
HIF3A-212ENST00000529205 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
HIF3A-212ENST00000529205 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 A0A087WZG4 1122 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 CAPN15O75808 1086 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 STARD3NLO95772 234 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 PDZRN3Q9UPQ7 1066 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
HIF3A-212ENST00000529205 SBF1O95248 1867 aa18.31■□□□□ 0.52
HIF3A-212ENST00000529205 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
HIF3A-212ENST00000529205 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
HIF3A-212ENST00000529205 BICDL1Q6ZP65 573 aa18.3■□□□□ 0.52
HIF3A-212ENST00000529205 ADAMTS7Q9UKP4 1686 aa18.29■□□□□ 0.52
HIF3A-212ENST00000529205 HMOX1P09601 288 aa18.29■□□□□ 0.52
HIF3A-212ENST00000529205 PDE6BP35913 854 aa18.29■□□□□ 0.52
HIF3A-212ENST00000529205 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
HIF3A-212ENST00000529205 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
HIF3A-212ENST00000529205 TEX13AQ9BXU3 409 aaPredicted RBP18.28■□□□□ 0.52
HIF3A-212ENST00000529205 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
HIF3A-212ENST00000529205 MRC1P22897 1456 aa18.27■□□□□ 0.52
HIF3A-212ENST00000529205 NPHP1O15259 732 aa18.27■□□□□ 0.52
HIF3A-212ENST00000529205 HSPA1AP0DMV8 641 aaKnown RBP18.27■□□□□ 0.52
HIF3A-212ENST00000529205 HSPA1BP0DMV9 641 aaKnown RBP18.27■□□□□ 0.52
HIF3A-212ENST00000529205 PRELPP51888 382 aa18.27■□□□□ 0.52
HIF3A-212ENST00000529205 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.52
HIF3A-212ENST00000529205 ERFEQ4G0M1 354 aa18.27■□□□□ 0.52
HIF3A-212ENST00000529205 NFKBIEO00221 500 aa18.26■□□□□ 0.51
HIF3A-212ENST00000529205 DIAPH1O60610 1272 aaKnown RBP18.26■□□□□ 0.51
HIF3A-212ENST00000529205 BRIP1Q9BX63 1249 aa18.26■□□□□ 0.51
HIF3A-212ENST00000529205 NRXN2Q9P2S2 1712 aa18.26■□□□□ 0.51
HIF3A-212ENST00000529205 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
HIF3A-212ENST00000529205 EIF5P55010 431 aaKnown RBP18.25■□□□□ 0.51
HIF3A-212ENST00000529205 TEFQ10587 303 aa18.25■□□□□ 0.51
HIF3A-212ENST00000529205 ZNF330Q9Y3S2 320 aaPredicted RBP18.25■□□□□ 0.51
HIF3A-212ENST00000529205 C21orf2O43822 256 aa18.24■□□□□ 0.51
HIF3A-212ENST00000529205 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
HIF3A-212ENST00000529205 DLEC1Q9Y238 1755 aa18.24■□□□□ 0.51
HIF3A-212ENST00000529205 TBC1D9BQ66K14 1250 aa18.23■□□□□ 0.51
HIF3A-212ENST00000529205 CARMIL3Q8ND23 1372 aa18.22■□□□□ 0.51
HIF3A-212ENST00000529205 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
HIF3A-212ENST00000529205 SOGA3Q5TF21 947 aa18.22■□□□□ 0.51
HIF3A-212ENST00000529205 CNKSR1Q969H4 720 aa18.22■□□□□ 0.51
HIF3A-212ENST00000529205 SETDB2Q96T68 719 aa18.22■□□□□ 0.51
HIF3A-212ENST00000529205 TAOK3Q9H2K8 898 aa18.22■□□□□ 0.51
HIF3A-212ENST00000529205 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 POTECB2RU33 542 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 IL6STP40189 918 aaPredicted RBP18.21■□□□□ 0.51
HIF3A-212ENST00000529205 ST5P78524 1137 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 PRR5LQ6MZQ0 368 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 CHADLQ6NUI6 762 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 CREBZFQ9NS37 354 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
HIF3A-212ENST00000529205 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
HIF3A-212ENST00000529205 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
HIF3A-212ENST00000529205 GAS2L2Q8NHY3 880 aa18.2■□□□□ 0.5
HIF3A-212ENST00000529205 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
HIF3A-212ENST00000529205 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
HIF3A-212ENST00000529205 ZNF496Q96IT1 587 aaPredicted RBP18.19■□□□□ 0.5
HIF3A-212ENST00000529205 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
HIF3A-212ENST00000529205 IQCA1LA6NCM1 817 aa18.18■□□□□ 0.5
HIF3A-212ENST00000529205 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
HIF3A-212ENST00000529205 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
HIF3A-212ENST00000529205 CCDC24Q8N4L8 307 aa18.18■□□□□ 0.5
HIF3A-212ENST00000529205 DDNO94850 711 aaPredicted RBP18.17■□□□□ 0.5
HIF3A-212ENST00000529205 MASTLQ96GX5 879 aa18.17■□□□□ 0.5
HIF3A-212ENST00000529205 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
HIF3A-212ENST00000529205 CCDC88AQ3V6T2 1871 aa18.17■□□□□ 0.5
HIF3A-212ENST00000529205 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
HIF3A-212ENST00000529205 UBR2Q8IWV8 1755 aa18.16■□□□□ 0.5
HIF3A-212ENST00000529205 VIRMAQ69YN4 1812 aaKnown RBP18.15■□□□□ 0.5
HIF3A-212ENST00000529205 SRGNP10124 158 aa18.15■□□□□ 0.5
HIF3A-212ENST00000529205 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
HIF3A-212ENST00000529205 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
HIF3A-212ENST00000529205 IL17REQ8NFR9 667 aa18.15■□□□□ 0.5
HIF3A-212ENST00000529205 BTBD11A6QL63 1104 aa18.14■□□□□ 0.49
HIF3A-212ENST00000529205 A1BGP04217 495 aa18.14■□□□□ 0.49
HIF3A-212ENST00000529205 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
HIF3A-212ENST00000529205 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
HIF3A-212ENST00000529205 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
HIF3A-212ENST00000529205 AIDAQ96BJ3 306 aa18.13■□□□□ 0.49
HIF3A-212ENST00000529205 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms