RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
PTPN22-208ENST00000529045 PRKD2Q9BZL6 878 aa9.67□□□□□ -0.86
PTPN22-208ENST00000529045 KDM5AP29375 1690 aaKnown RBP9.67□□□□□ -0.86
PTPN22-208ENST00000529045 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
PTPN22-208ENST00000529045 SPATA31A6Q5VVP1 1343 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 ZPR1O75312 459 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 RALBP1Q15311 655 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 PNISRQ8TF01 805 aaKnown RBP9.66□□□□□ -0.86
PTPN22-208ENST00000529045 BACH2Q9BYV9 841 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.66□□□□□ -0.86
PTPN22-208ENST00000529045 GPATCH8Q9UKJ3 1502 aaKnown RBP9.66□□□□□ -0.86
PTPN22-208ENST00000529045 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
PTPN22-208ENST00000529045 DAPK1P53355 1430 aa9.65□□□□□ -0.86
PTPN22-208ENST00000529045 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
PTPN22-208ENST00000529045 RFX1P22670 979 aa9.65□□□□□ -0.86
PTPN22-208ENST00000529045 CAMSAP2Q08AD1 1489 aa9.65□□□□□ -0.87
PTPN22-208ENST00000529045 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
PTPN22-208ENST00000529045 NEFMP07197 916 aa9.64□□□□□ -0.87
PTPN22-208ENST00000529045 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
PTPN22-208ENST00000529045 MAP10Q9P2G4 905 aa9.64□□□□□ -0.87
PTPN22-208ENST00000529045 ZBTB7CA1YPR0 619 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 TLL1O43897 1013 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 JUNDP17535 347 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 SOX11P35716 441 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 NBPF8Q3BBV2 869 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 UBE2Q2Q8WVN8 375 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 ADGRL2O95490 1459 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 EIF2AK4Q9P2K8 1649 aaKnown RBP9.63□□□□□ -0.87
PTPN22-208ENST00000529045 USP47Q96K76 1375 aa9.63□□□□□ -0.87
PTPN22-208ENST00000529045 PRDM15P57071 1507 aaPredicted RBP9.62□□□□□ -0.87
PTPN22-208ENST00000529045 MYBBP1AQ9BQG0 1328 aaKnown RBP9.62□□□□□ -0.87
PTPN22-208ENST00000529045 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
PTPN22-208ENST00000529045 RRP7BPQ9NSQ0 103 aa9.62□□□□□ -0.87
PTPN22-208ENST00000529045 CROCC2H7BZ55 1655 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 LRP6O75581 1613 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 AHDC1Q5TGY3 1603 aaPredicted RBP9.61□□□□□ -0.87
PTPN22-208ENST00000529045 NR1H3Q13133 447 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 PTPRNQ16849 979 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 Q6ZNB5 142 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 TFIP11Q9UBB9 837 aaKnown RBP9.61□□□□□ -0.87
PTPN22-208ENST00000529045 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 TMEM94Q12767 1356 aa9.61□□□□□ -0.87
PTPN22-208ENST00000529045 ABCC5O15440 1437 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 NR1I2O75469 434 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 RXRBP28702 533 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 HNRNPMP52272 730 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPN22-208ENST00000529045 TBC1D9Q6ZT07 1266 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 TMC1Q8TDI8 760 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 RCAN3Q9UKA8 241 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 MSH6P52701 1360 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 LRP5O75197 1615 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 LAMC1P11047 1609 aa9.6□□□□□ -0.87
PTPN22-208ENST00000529045 LMOD1P29536 600 aaPredicted RBP9.59□□□□□ -0.87
PTPN22-208ENST00000529045 GGCXP38435 758 aa9.59□□□□□ -0.87
PTPN22-208ENST00000529045 SEMA3FQ13275 785 aa9.59□□□□□ -0.87
PTPN22-208ENST00000529045 MSS51Q4VC12 460 aa9.59□□□□□ -0.87
PTPN22-208ENST00000529045 KCTD17Q8N5Z5 321 aa9.59□□□□□ -0.87
PTPN22-208ENST00000529045 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
PTPN22-208ENST00000529045 PRDM9Q9NQV7 894 aa9.59□□□□□ -0.87
PTPN22-208ENST00000529045 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
PTPN22-208ENST00000529045 GFRA3O60609 400 aa9.58□□□□□ -0.88
PTPN22-208ENST00000529045 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
PTPN22-208ENST00000529045 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
PTPN22-208ENST00000529045 CFDP1Q9UEE9 299 aaPredicted RBP9.58□□□□□ -0.88
PTPN22-208ENST00000529045 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
PTPN22-208ENST00000529045 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
PTPN22-208ENST00000529045 PIK3CDO00329 1044 aa9.57□□□□□ -0.88
PTPN22-208ENST00000529045 KIF3BO15066 747 aa9.57□□□□□ -0.88
PTPN22-208ENST00000529045 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
PTPN22-208ENST00000529045 OCSTAMPQ9BR26 566 aa9.57□□□□□ -0.88
PTPN22-208ENST00000529045 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
PTPN22-208ENST00000529045 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
PTPN22-208ENST00000529045 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
PTPN22-208ENST00000529045 ATAD2Q6PL18 1390 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 PARD3Q8TEW0 1356 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 MMP16P51512 607 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 NLRP13Q86W25 1043 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 FAM43AQ8N2R8 423 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 PNMA1Q8ND90 353 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 EID1Q9Y6B2 187 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 VIRMAQ69YN4 1812 aaKnown RBP9.56□□□□□ -0.88
PTPN22-208ENST00000529045 RGS12O14924 1447 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
PTPN22-208ENST00000529045 PPEF1O14829 653 aaPredicted RBP9.55□□□□□ -0.88
PTPN22-208ENST00000529045 KCNA6P17658 529 aa9.55□□□□□ -0.88
PTPN22-208ENST00000529045 SPSB2Q99619 263 aa9.55□□□□□ -0.88
PTPN22-208ENST00000529045 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
PTPN22-208ENST00000529045 CEP152O94986 1710 aa9.55□□□□□ -0.88
PTPN22-208ENST00000529045 EP400Q96L91 3159 aa9.55□□□□□ -0.88
PTPN22-208ENST00000529045 TET3O43151 1660 aa9.55□□□□□ -0.88
PTPN22-208ENST00000529045 ARHGEF5Q12774 1597 aa9.54□□□□□ -0.88
PTPN22-208ENST00000529045 DIP2AQ14689 1571 aa9.54□□□□□ -0.88
PTPN22-208ENST00000529045 PIK3C2BO00750 1634 aa9.54□□□□□ -0.88
PTPN22-208ENST00000529045 ATP9BO43861 1147 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms