RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 ZNF784Q8NCA9 323 aaPredicted RBP19.34■□□□□ 0.69
PACS1-207ENST00000528935 FMNL2Q96PY5 1086 aa19.34■□□□□ 0.69
PACS1-207ENST00000528935 NEFMP07197 916 aa19.33■□□□□ 0.68
PACS1-207ENST00000528935 TGFB2P61812 414 aa19.33■□□□□ 0.68
PACS1-207ENST00000528935 MCM10Q7L590 875 aa19.33■□□□□ 0.68
PACS1-207ENST00000528935 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
PACS1-207ENST00000528935 USPL1Q5W0Q7 1092 aa19.32■□□□□ 0.68
PACS1-207ENST00000528935 NARFQ9UHQ1 456 aa19.32■□□□□ 0.68
PACS1-207ENST00000528935 C10orf71Q711Q0 1435 aa19.32■□□□□ 0.68
PACS1-207ENST00000528935 COL15A1P39059 1388 aa19.32■□□□□ 0.68
PACS1-207ENST00000528935 KCNQ3O43525 872 aa19.31■□□□□ 0.68
PACS1-207ENST00000528935 TM4SF1P30408 202 aa19.31■□□□□ 0.68
PACS1-207ENST00000528935 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
PACS1-207ENST00000528935 EIF5P55010 431 aaKnown RBP19.3■□□□□ 0.68
PACS1-207ENST00000528935 DDR1Q08345 913 aa19.3■□□□□ 0.68
PACS1-207ENST00000528935 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
PACS1-207ENST00000528935 PLEKHF1Q96S99 279 aa19.3■□□□□ 0.68
PACS1-207ENST00000528935 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
PACS1-207ENST00000528935 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
PACS1-207ENST00000528935 A0A087WZG4 1122 aa19.29■□□□□ 0.68
PACS1-207ENST00000528935 A0A0G2JLW4 131 aa19.29■□□□□ 0.68
PACS1-207ENST00000528935 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
PACS1-207ENST00000528935 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
PACS1-207ENST00000528935 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
PACS1-207ENST00000528935 DPEP1P16444 411 aa19.27■□□□□ 0.68
PACS1-207ENST00000528935 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
PACS1-207ENST00000528935 BCL2L12Q9HB09 334 aa19.27■□□□□ 0.68
PACS1-207ENST00000528935 IL6STP40189 918 aaPredicted RBP19.26■□□□□ 0.67
PACS1-207ENST00000528935 NFIXQ14938 502 aa19.26■□□□□ 0.67
PACS1-207ENST00000528935 NFE2L2Q16236 605 aa19.26■□□□□ 0.67
PACS1-207ENST00000528935 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
PACS1-207ENST00000528935 A1BGP04217 495 aa19.25■□□□□ 0.67
PACS1-207ENST00000528935 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
PACS1-207ENST00000528935 USP16Q9Y5T5 823 aa19.25■□□□□ 0.67
PACS1-207ENST00000528935 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
PACS1-207ENST00000528935 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
PACS1-207ENST00000528935 KCNA3P22001 575 aa19.23■□□□□ 0.67
PACS1-207ENST00000528935 NPM2Q86SE8 214 aaKnown RBP19.23■□□□□ 0.67
PACS1-207ENST00000528935 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
PACS1-207ENST00000528935 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
PACS1-207ENST00000528935 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
PACS1-207ENST00000528935 N4BP2Q86UW6 1770 aaPredicted RBP19.23■□□□□ 0.67
PACS1-207ENST00000528935 PRAMEF22A3QJZ6 481 aa19.22■□□□□ 0.67
PACS1-207ENST00000528935 SERPINB2P05120 415 aa19.22■□□□□ 0.67
PACS1-207ENST00000528935 MIS18AQ9NYP9 233 aa19.22■□□□□ 0.67
PACS1-207ENST00000528935 TBC1D2BQ9UPU7 963 aa19.22■□□□□ 0.67
PACS1-207ENST00000528935 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
PACS1-207ENST00000528935 DLG5Q8TDM6 1919 aa19.19■□□□□ 0.66
PACS1-207ENST00000528935 TBC1D9BQ66K14 1250 aa19.19■□□□□ 0.66
PACS1-207ENST00000528935 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
PACS1-207ENST00000528935 THUMPD2Q9BTF0 503 aaKnown RBP19.19■□□□□ 0.66
PACS1-207ENST00000528935 CAMTA2O94983 1202 aa19.18■□□□□ 0.66
PACS1-207ENST00000528935 CHRNA5P30532 468 aa19.18■□□□□ 0.66
PACS1-207ENST00000528935 DALRD3Q5D0E6 543 aaKnown RBP19.18■□□□□ 0.66
PACS1-207ENST00000528935 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
PACS1-207ENST00000528935 PIP4K2AP48426 406 aaPredicted RBP19.17■□□□□ 0.66
PACS1-207ENST00000528935 RIPK4P57078 832 aa19.17■□□□□ 0.66
PACS1-207ENST00000528935 ARHGAP27Q6ZUM4 889 aa19.17■□□□□ 0.66
PACS1-207ENST00000528935 PRKRIP1Q9H875 184 aaPredicted RBP19.17■□□□□ 0.66
PACS1-207ENST00000528935 ADCY9O60503 1353 aa19.17■□□□□ 0.66
PACS1-207ENST00000528935 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
PACS1-207ENST00000528935 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
PACS1-207ENST00000528935 NBPF26B4DH59 902 aa19.16■□□□□ 0.66
PACS1-207ENST00000528935 NBPF10Q6P3W6 841 aaKnown RBP19.16■□□□□ 0.66
PACS1-207ENST00000528935 NBPF15Q8N660 670 aa19.16■□□□□ 0.66
PACS1-207ENST00000528935 ATP10DQ9P241 1426 aa19.16■□□□□ 0.66
PACS1-207ENST00000528935 BRCA1P38398 1863 aaKnown RBP19.16■□□□□ 0.66
PACS1-207ENST00000528935 SCN7AQ01118 1682 aa19.15■□□□□ 0.66
PACS1-207ENST00000528935 GIGYF1O75420 1035 aaPredicted RBP19.15■□□□□ 0.66
PACS1-207ENST00000528935 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
PACS1-207ENST00000528935 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
PACS1-207ENST00000528935 LMOD3Q0VAK6 560 aa19.14■□□□□ 0.65
PACS1-207ENST00000528935 WDR43Q15061 677 aaKnown RBP eCLIP19.14■□□□□ 0.65
PACS1-207ENST00000528935 CLEC4GQ6UXB4 293 aa19.14■□□□□ 0.65
PACS1-207ENST00000528935 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
PACS1-207ENST00000528935 CARMIL3Q8ND23 1372 aa19.14■□□□□ 0.65
PACS1-207ENST00000528935 ANP32CO43423 234 aa19.13■□□□□ 0.65
PACS1-207ENST00000528935 KDM3BQ7LBC6 1761 aa19.13■□□□□ 0.65
PACS1-207ENST00000528935 H0YIN7 160 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 RGL2O15211 777 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 C2CD5Q86YS7 1000 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 CCDC146Q8IYE0 955 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 MIER1Q8N108 512 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 RUNDC1Q96C34 613 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 ADAMTS8Q9UP79 889 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 ZNF652Q9Y2D9 606 aa19.12■□□□□ 0.65
PACS1-207ENST00000528935 C1QTNF8P60827 252 aa19.11■□□□□ 0.65
PACS1-207ENST00000528935 BRIP1Q9BX63 1249 aa19.11■□□□□ 0.65
PACS1-207ENST00000528935 GPBP1L1Q9HC44 474 aaPredicted RBP19.11■□□□□ 0.65
PACS1-207ENST00000528935 BABAM1Q9NWV8 329 aa19.11■□□□□ 0.65
PACS1-207ENST00000528935 TSPYL4Q9UJ04 414 aa19.11■□□□□ 0.65
PACS1-207ENST00000528935 PDZRN3Q9UPQ7 1066 aa19.11■□□□□ 0.65
PACS1-207ENST00000528935 ARFGEF1Q9Y6D6 1849 aa19.11■□□□□ 0.65
PACS1-207ENST00000528935 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
PACS1-207ENST00000528935 PDE6BP35913 854 aa19.1■□□□□ 0.65
PACS1-207ENST00000528935 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
PACS1-207ENST00000528935 BCORQ6W2J9 1755 aa19.09■□□□□ 0.65
PACS1-207ENST00000528935 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
PACS1-207ENST00000528935 TTLL6Q8N841 843 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms