RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 ANXA1P04083 346 aa12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 AOX1Q06278 1338 aa12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 SETD1BQ9UPS6 1966 aaKnown RBP12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 RHPN1Q8TCX5 695 aa12.81□□□□□ -0.36
AP002008.3-201ENST00000528614 NCLP19338 710 aaKnown RBP12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 ANAPC15P60006 121 aa12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 CHD2O14647 1828 aaKnown RBP12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 MCM2P49736 904 aa12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
AP002008.3-201ENST00000528614 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 KIF1BPQ96EK5 621 aa12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 IL25Q9H293 177 aa12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 GCP02774 474 aa12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
AP002008.3-201ENST00000528614 PRPF40AO75400 957 aaKnown RBP12.78□□□□□ -0.36
AP002008.3-201ENST00000528614 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
AP002008.3-201ENST00000528614 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
AP002008.3-201ENST00000528614 ADGRL3Q9HAR2 1447 aa12.78□□□□□ -0.36
AP002008.3-201ENST00000528614 CUL4AQ13619 759 aa12.78□□□□□ -0.36
AP002008.3-201ENST00000528614 NOL8Q76FK4 1167 aaKnown RBP12.78□□□□□ -0.36
AP002008.3-201ENST00000528614 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 ADCY9O60503 1353 aa12.77□□□□□ -0.36
AP002008.3-201ENST00000528614 IL17RAQ96F46 866 aa12.77□□□□□ -0.37
AP002008.3-201ENST00000528614 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
AP002008.3-201ENST00000528614 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 UPF3BQ9BZI7 483 aaKnown RBP12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 HSPA4P34932 840 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 ZNF445P59923 1031 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 GPT2Q8TD30 523 aa12.76□□□□□ -0.37
AP002008.3-201ENST00000528614 PRAMEF22A3QJZ6 481 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 CLCN1P35523 988 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 INTS4Q96HW7 963 aaKnown RBP12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 SGSM2O43147 1006 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 BRD1O95696 1058 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 NASPP49321 788 aaPredicted RBP12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 C9orf78Q9NZ63 289 aaPredicted RBP12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
AP002008.3-201ENST00000528614 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
AP002008.3-201ENST00000528614 PXDNQ92626 1479 aa12.74□□□□□ -0.37
AP002008.3-201ENST00000528614 KSR2Q6VAB6 950 aa12.74□□□□□ -0.37
AP002008.3-201ENST00000528614 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
AP002008.3-201ENST00000528614 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
AP002008.3-201ENST00000528614 MTX1Q13505 466 aa12.74□□□□□ -0.37
AP002008.3-201ENST00000528614 ESPNB1AK53 854 aa12.73□□□□□ -0.37
AP002008.3-201ENST00000528614 PHRF1Q9P1Y6 1649 aaKnown RBP12.73□□□□□ -0.37
AP002008.3-201ENST00000528614 CWF19L2Q2TBE0 894 aaKnown RBP12.73□□□□□ -0.37
AP002008.3-201ENST00000528614 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
AP002008.3-201ENST00000528614 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
AP002008.3-201ENST00000528614 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
AP002008.3-201ENST00000528614 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 TTC41PQ6P2S7 1318 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 RAD50Q92878 1312 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 USP42Q9H9J4 1324 aaKnown RBP12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 CWC27Q6UX04 472 aaKnown RBP12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 PA2G4Q9UQ80 394 aaKnown RBP12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
AP002008.3-201ENST00000528614 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
AP002008.3-201ENST00000528614 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
AP002008.3-201ENST00000528614 ANP32BQ92688 251 aaKnown RBP12.71□□□□□ -0.37
AP002008.3-201ENST00000528614 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
AP002008.3-201ENST00000528614 SLIT3O75094 1523 aa12.71□□□□□ -0.37
AP002008.3-201ENST00000528614 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.38
AP002008.3-201ENST00000528614 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.38
AP002008.3-201ENST00000528614 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.38
AP002008.3-201ENST00000528614 RBSNQ9H1K0 784 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms