RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 MARCH10Q8NA82 808 aaPredicted RBP10.86□□□□□ -0.67
RDX-205ENST00000528556 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
RDX-205ENST00000528556 BABAM1Q9NWV8 329 aa10.86□□□□□ -0.67
RDX-205ENST00000528556 LRRC37A3O60309 1634 aa10.86□□□□□ -0.67
RDX-205ENST00000528556 CHL1O00533 1208 aa10.85□□□□□ -0.67
RDX-205ENST00000528556 PRIM1P49642 420 aaKnown RBP10.85□□□□□ -0.67
RDX-205ENST00000528556 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
RDX-205ENST00000528556 DUSP27Q5VZP5 1158 aa10.85□□□□□ -0.67
RDX-205ENST00000528556 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
RDX-205ENST00000528556 CEMIPQ8WUJ3 1361 aa10.85□□□□□ -0.67
RDX-205ENST00000528556 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
RDX-205ENST00000528556 ONECUT3O60422 494 aaPredicted RBP10.84□□□□□ -0.67
RDX-205ENST00000528556 TWISTNBQ3B726 338 aaPredicted RBP10.84□□□□□ -0.67
RDX-205ENST00000528556 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
RDX-205ENST00000528556 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
RDX-205ENST00000528556 RCAN3Q9UKA8 241 aa10.84□□□□□ -0.67
RDX-205ENST00000528556 NEFLP07196 543 aa10.83□□□□□ -0.68
RDX-205ENST00000528556 ZNF853P0CG23 659 aa10.83□□□□□ -0.68
RDX-205ENST00000528556 SLC39A6Q13433 755 aa10.83□□□□□ -0.68
RDX-205ENST00000528556 POTEAQ6S8J7 498 aa10.83□□□□□ -0.68
RDX-205ENST00000528556 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
RDX-205ENST00000528556 SCN11AQ9UI33 1791 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 SHANK3Q9BYB0 1731 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 MAP3K13O43283 966 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
RDX-205ENST00000528556 ZNF790Q6PG37 636 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 TRMT2AQ8IZ69 625 aaKnown RBP10.82□□□□□ -0.68
RDX-205ENST00000528556 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.82□□□□□ -0.68
RDX-205ENST00000528556 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 STK31Q9BXU1 1019 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 THSD7AQ9UPZ6 1657 aa10.82□□□□□ -0.68
RDX-205ENST00000528556 CT47B1P0C2W7 299 aaPredicted RBP10.81□□□□□ -0.68
RDX-205ENST00000528556 EIF2S2P20042 333 aaKnown RBP10.81□□□□□ -0.68
RDX-205ENST00000528556 PIGBQ92521 554 aa10.81□□□□□ -0.68
RDX-205ENST00000528556 SMARCC1Q92922 1105 aaPredicted RBP10.81□□□□□ -0.68
RDX-205ENST00000528556 SMC4Q9NTJ3 1288 aa10.81□□□□□ -0.68
RDX-205ENST00000528556 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
RDX-205ENST00000528556 KAT6BQ8WYB5 2073 aa10.8□□□□□ -0.68
RDX-205ENST00000528556 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
RDX-205ENST00000528556 KCNQ3O43525 872 aa10.8□□□□□ -0.68
RDX-205ENST00000528556 EIF4A1P60842 406 aaKnown RBP10.8□□□□□ -0.68
RDX-205ENST00000528556 CCDC30Q5VVM6 783 aa10.8□□□□□ -0.68
RDX-205ENST00000528556 NPM2Q86SE8 214 aaKnown RBP10.8□□□□□ -0.68
RDX-205ENST00000528556 C8orf58Q8NAV2 365 aa10.8□□□□□ -0.68
RDX-205ENST00000528556 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
RDX-205ENST00000528556 FRAT1Q92837 279 aaPredicted RBP10.8□□□□□ -0.68
RDX-205ENST00000528556 DOT1LQ8TEK3 1739 aa10.8□□□□□ -0.68
RDX-205ENST00000528556 TCERG1O14776 1098 aaKnown RBP10.79□□□□□ -0.68
RDX-205ENST00000528556 SNRPA1P09661 255 aaKnown RBP10.79□□□□□ -0.68
RDX-205ENST00000528556 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
RDX-205ENST00000528556 HDGFL1Q5TGJ6 251 aa10.79□□□□□ -0.68
RDX-205ENST00000528556 ZNF428Q96B54 188 aa10.79□□□□□ -0.68
RDX-205ENST00000528556 BCL2L13Q9BXK5 485 aa10.79□□□□□ -0.68
RDX-205ENST00000528556 ASAP1Q9ULH1 1129 aa10.79□□□□□ -0.68
RDX-205ENST00000528556 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
RDX-205ENST00000528556 MRC1P22897 1456 aa10.79□□□□□ -0.68
RDX-205ENST00000528556 RGS12O14924 1447 aa10.78□□□□□ -0.68
RDX-205ENST00000528556 KCNQ2O43526 872 aa10.78□□□□□ -0.68
RDX-205ENST00000528556 SF3B2Q13435 895 aaKnown RBP10.78□□□□□ -0.68
RDX-205ENST00000528556 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
RDX-205ENST00000528556 ZNF496Q96IT1 587 aaPredicted RBP10.78□□□□□ -0.68
RDX-205ENST00000528556 ATG3Q9NT62 314 aa10.78□□□□□ -0.68
RDX-205ENST00000528556 ADAMTS7Q9UKP4 1686 aa10.78□□□□□ -0.68
RDX-205ENST00000528556 SOS1Q07889 1333 aaPredicted RBP10.78□□□□□ -0.68
RDX-205ENST00000528556 BCL9O00512 1426 aa10.77□□□□□ -0.68
RDX-205ENST00000528556 VAMP4O75379 141 aa10.77□□□□□ -0.69
RDX-205ENST00000528556 TRIM37O94972 964 aa10.77□□□□□ -0.69
RDX-205ENST00000528556 HOXB7P09629 217 aa10.77□□□□□ -0.69
RDX-205ENST00000528556 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
RDX-205ENST00000528556 TOGARAM1Q9Y4F4 1720 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 IPO8O15397 1037 aaKnown RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 GIGYF1O75420 1035 aaPredicted RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 STARD3NLO95772 234 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 PYGBP11216 843 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 CHRM1P11229 460 aaPredicted RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 ALDH1L2Q3SY69 923 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 COLQQ9Y215 455 aaPredicted RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
RDX-205ENST00000528556 PALLDQ8WX93 1383 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 HEG1Q9ULI3 1381 aa10.76□□□□□ -0.69
RDX-205ENST00000528556 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
RDX-205ENST00000528556 KDM3BQ7LBC6 1761 aa10.75□□□□□ -0.69
RDX-205ENST00000528556 ITGB4P16144 1822 aa10.75□□□□□ -0.69
RDX-205ENST00000528556 BRWD3Q6RI45 1802 aa10.75□□□□□ -0.69
RDX-205ENST00000528556 BCAR3O75815 825 aa10.75□□□□□ -0.69
RDX-205ENST00000528556 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
RDX-205ENST00000528556 ARXQ96QS3 562 aa10.75□□□□□ -0.69
RDX-205ENST00000528556 DBF4Q9UBU7 674 aaPredicted RBP10.75□□□□□ -0.69
RDX-205ENST00000528556 APBA3O96018 575 aa10.74□□□□□ -0.69
RDX-205ENST00000528556 MS4A1P11836 297 aa10.74□□□□□ -0.69
RDX-205ENST00000528556 MYL6BP14649 208 aa10.74□□□□□ -0.69
RDX-205ENST00000528556 ZKSCAN2Q63HK3 967 aa10.74□□□□□ -0.69
RDX-205ENST00000528556 FTSJ3Q8IY81 847 aaKnown RBP10.74□□□□□ -0.69
RDX-205ENST00000528556 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
RDX-205ENST00000528556 CCNL1Q9UK58 526 aaPredicted RBP10.74□□□□□ -0.69
RDX-205ENST00000528556 KIF16BQ96L93 1317 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms