RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
CLNS1A-210ENST00000528364 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
CLNS1A-210ENST00000528364 NFIXQ14938 502 aa20.89■□□□□ 0.93
CLNS1A-210ENST00000528364 VSIG10Q8N0Z9 540 aa20.89■□□□□ 0.93
CLNS1A-210ENST00000528364 ZNF496Q96IT1 587 aaPredicted RBP20.89■□□□□ 0.93
CLNS1A-210ENST00000528364 PIM2Q9P1W9 311 aa20.89■□□□□ 0.93
CLNS1A-210ENST00000528364 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
CLNS1A-210ENST00000528364 KCNQ3O43525 872 aa20.87■□□□□ 0.93
CLNS1A-210ENST00000528364 PRKAR2BP31323 418 aa20.87■□□□□ 0.93
CLNS1A-210ENST00000528364 TEFQ10587 303 aa20.87■□□□□ 0.93
CLNS1A-210ENST00000528364 TTC5Q8N0Z6 440 aa20.87■□□□□ 0.93
CLNS1A-210ENST00000528364 COL15A1P39059 1388 aa20.86■□□□□ 0.93
CLNS1A-210ENST00000528364 KIF3CO14782 793 aa20.86■□□□□ 0.93
CLNS1A-210ENST00000528364 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
CLNS1A-210ENST00000528364 PPP2R1AP30153 589 aa20.85■□□□□ 0.93
CLNS1A-210ENST00000528364 DALRD3Q5D0E6 543 aaKnown RBP20.85■□□□□ 0.93
CLNS1A-210ENST00000528364 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
CLNS1A-210ENST00000528364 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
CLNS1A-210ENST00000528364 BRCA1P38398 1863 aaKnown RBP20.84■□□□□ 0.93
CLNS1A-210ENST00000528364 STARD3NLO95772 234 aa20.84■□□□□ 0.93
CLNS1A-210ENST00000528364 EIF5P55010 431 aaKnown RBP20.84■□□□□ 0.93
CLNS1A-210ENST00000528364 BICDL1Q6ZP65 573 aa20.84■□□□□ 0.93
CLNS1A-210ENST00000528364 SERPINB2P05120 415 aa20.83■□□□□ 0.93
CLNS1A-210ENST00000528364 C9orf131Q5VYM1 1079 aa20.83■□□□□ 0.93
CLNS1A-210ENST00000528364 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
CLNS1A-210ENST00000528364 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.92
CLNS1A-210ENST00000528364 TBC1D2BQ9UPU7 963 aa20.82■□□□□ 0.92
CLNS1A-210ENST00000528364 ZNF330Q9Y3S2 320 aaPredicted RBP20.82■□□□□ 0.92
CLNS1A-210ENST00000528364 HEG1Q9ULI3 1381 aa20.82■□□□□ 0.92
CLNS1A-210ENST00000528364 UBR2Q8IWV8 1755 aa20.82■□□□□ 0.92
CLNS1A-210ENST00000528364 A1BGP04217 495 aa20.81■□□□□ 0.92
CLNS1A-210ENST00000528364 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
CLNS1A-210ENST00000528364 NMRK2Q9NPI5 230 aa20.8■□□□□ 0.92
CLNS1A-210ENST00000528364 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
CLNS1A-210ENST00000528364 AFDNP55196 1824 aaKnown RBP20.8■□□□□ 0.92
CLNS1A-210ENST00000528364 BTBD11A6QL63 1104 aa20.79■□□□□ 0.92
CLNS1A-210ENST00000528364 TBC1D9BQ66K14 1250 aa20.79■□□□□ 0.92
CLNS1A-210ENST00000528364 MCM10Q7L590 875 aa20.79■□□□□ 0.92
CLNS1A-210ENST00000528364 FMNL2Q96PY5 1086 aa20.79■□□□□ 0.92
CLNS1A-210ENST00000528364 TEX13AQ9BXU3 409 aaPredicted RBP20.79■□□□□ 0.92
CLNS1A-210ENST00000528364 ARFGEF1Q9Y6D6 1849 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 A0A087WZG4 1122 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 PRAMEF22A3QJZ6 481 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 HSPA6P17066 643 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 CCDC24Q8N4L8 307 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 USP16Q9Y5T5 823 aa20.78■□□□□ 0.92
CLNS1A-210ENST00000528364 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.92
CLNS1A-210ENST00000528364 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.92
CLNS1A-210ENST00000528364 CARMIL3Q8ND23 1372 aa20.76■□□□□ 0.91
CLNS1A-210ENST00000528364 C2CD5Q86YS7 1000 aa20.76■□□□□ 0.91
CLNS1A-210ENST00000528364 RNF181Q9P0P0 153 aa20.76■□□□□ 0.91
CLNS1A-210ENST00000528364 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
CLNS1A-210ENST00000528364 RASSF7Q02833 373 aa20.75■□□□□ 0.91
CLNS1A-210ENST00000528364 NRXN2Q9P2S2 1712 aa20.73■□□□□ 0.91
CLNS1A-210ENST00000528364 PRELPP51888 382 aa20.73■□□□□ 0.91
CLNS1A-210ENST00000528364 TTLL6Q8N841 843 aa20.73■□□□□ 0.91
CLNS1A-210ENST00000528364 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
CLNS1A-210ENST00000528364 H0YIN7 160 aa20.72■□□□□ 0.91
CLNS1A-210ENST00000528364 TOMM70O94826 608 aa20.72■□□□□ 0.91
CLNS1A-210ENST00000528364 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
CLNS1A-210ENST00000528364 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
CLNS1A-210ENST00000528364 SBF1O95248 1867 aa20.71■□□□□ 0.91
CLNS1A-210ENST00000528364 PRR5LQ6MZQ0 368 aa20.71■□□□□ 0.91
CLNS1A-210ENST00000528364 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
CLNS1A-210ENST00000528364 ZNF622Q969S3 477 aaKnown RBP eCLIP20.7■□□□□ 0.91e-13■■□□□ 12.4
CLNS1A-210ENST00000528364 RRAGCQ9HB90 399 aa20.7■□□□□ 0.9
CLNS1A-210ENST00000528364 ZNF219Q9P2Y4 722 aaPredicted RBP20.7■□□□□ 0.9
CLNS1A-210ENST00000528364 CEP350Q5VT06 3117 aa20.7■□□□□ 0.9
CLNS1A-210ENST00000528364 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
CLNS1A-210ENST00000528364 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
CLNS1A-210ENST00000528364 SETDB2Q96T68 719 aa20.68■□□□□ 0.9
CLNS1A-210ENST00000528364 BRIP1Q9BX63 1249 aa20.68■□□□□ 0.9
CLNS1A-210ENST00000528364 NBPF26B4DH59 902 aa20.67■□□□□ 0.9
CLNS1A-210ENST00000528364 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
CLNS1A-210ENST00000528364 TAF7Q15545 349 aaPredicted RBP20.67■□□□□ 0.9
CLNS1A-210ENST00000528364 NBPF10Q6P3W6 841 aaKnown RBP20.67■□□□□ 0.9
CLNS1A-210ENST00000528364 NBPF15Q8N660 670 aa20.67■□□□□ 0.9
CLNS1A-210ENST00000528364 ANKRD31Q8N7Z5 1873 aa20.67■□□□□ 0.9
CLNS1A-210ENST00000528364 PDE6BP35913 854 aa20.66■□□□□ 0.9
CLNS1A-210ENST00000528364 KDM2BQ8NHM5 1336 aa20.65■□□□□ 0.9
CLNS1A-210ENST00000528364 NFKBIEO00221 500 aa20.65■□□□□ 0.9
CLNS1A-210ENST00000528364 C21orf2O43822 256 aa20.65■□□□□ 0.9
CLNS1A-210ENST00000528364 LMNB1P20700 586 aa20.65■□□□□ 0.9
CLNS1A-210ENST00000528364 CNBD1Q8NA66 436 aa20.64■□□□□ 0.89
CLNS1A-210ENST00000528364 RBM46Q8TBY0 533 aaKnown RBP20.64■□□□□ 0.89
CLNS1A-210ENST00000528364 PLEKHF1Q96S99 279 aa20.64■□□□□ 0.89
CLNS1A-210ENST00000528364 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
CLNS1A-210ENST00000528364 DLEC1Q9Y238 1755 aa20.64■□□□□ 0.89
CLNS1A-210ENST00000528364 SCN7AQ01118 1682 aa20.64■□□□□ 0.89
CLNS1A-210ENST00000528364 NPHP1O15259 732 aa20.63■□□□□ 0.89
CLNS1A-210ENST00000528364 APLP1P51693 650 aa20.63■□□□□ 0.89
CLNS1A-210ENST00000528364 C16orf71Q8IYS4 520 aaPredicted RBP20.63■□□□□ 0.89
CLNS1A-210ENST00000528364 CCDC88AQ3V6T2 1871 aa20.62■□□□□ 0.89
CLNS1A-210ENST00000528364 HTRA3P83110 453 aa20.61■□□□□ 0.89
CLNS1A-210ENST00000528364 FAM177BA6PVY3 158 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 SRGNP10124 158 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 ST5P78524 1137 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 HLFQ16534 295 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 419.7 ms