RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 N4BP2Q86UW6 1770 aaPredicted RBP20.15■□□□□ 0.82
PUF60-212ENST00000528320 GNAT3A8MTJ3 354 aa20.14■□□□□ 0.81
PUF60-212ENST00000528320 USP42Q9H9J4 1324 aaKnown RBP20.13■□□□□ 0.81
PUF60-212ENST00000528320 TOMM70O94826 608 aa20.13■□□□□ 0.81
PUF60-212ENST00000528320 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
PUF60-212ENST00000528320 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
PUF60-212ENST00000528320 PIM2Q9P1W9 311 aa20.13■□□□□ 0.81
PUF60-212ENST00000528320 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
PUF60-212ENST00000528320 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
PUF60-212ENST00000528320 FKBP8Q14318 412 aa20.12■□□□□ 0.81
PUF60-212ENST00000528320 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
PUF60-212ENST00000528320 SRP68Q9UHB9 627 aaKnown RBP20.12■□□□□ 0.81
PUF60-212ENST00000528320 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
PUF60-212ENST00000528320 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
PUF60-212ENST00000528320 DDR1Q08345 913 aa20.1■□□□□ 0.81
PUF60-212ENST00000528320 VSIG10Q8N0Z9 540 aa20.1■□□□□ 0.81
PUF60-212ENST00000528320 TJP1Q07157 1748 aa20.1■□□□□ 0.81
PUF60-212ENST00000528320 SIPA1L3O60292 1781 aaPredicted RBP20.09■□□□□ 0.81
PUF60-212ENST00000528320 TM4SF1P30408 202 aa20.09■□□□□ 0.81
PUF60-212ENST00000528320 APLP1P51693 650 aa20.09■□□□□ 0.81
PUF60-212ENST00000528320 DALRD3Q5D0E6 543 aaKnown RBP20.09■□□□□ 0.81
PUF60-212ENST00000528320 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
PUF60-212ENST00000528320 BRCA1P38398 1863 aaKnown RBP20.08■□□□□ 0.81
PUF60-212ENST00000528320 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
PUF60-212ENST00000528320 C9orf131Q5VYM1 1079 aa20.08■□□□□ 0.81
PUF60-212ENST00000528320 UBR2Q8IWV8 1755 aa20.08■□□□□ 0.8
PUF60-212ENST00000528320 ZPR1O75312 459 aa20.07■□□□□ 0.8
PUF60-212ENST00000528320 CYP19A1P11511 503 aaPredicted RBP20.07■□□□□ 0.8
PUF60-212ENST00000528320 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
PUF60-212ENST00000528320 NMRK2Q9NPI5 230 aa20.07■□□□□ 0.8
PUF60-212ENST00000528320 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
PUF60-212ENST00000528320 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
PUF60-212ENST00000528320 ARFGEF1Q9Y6D6 1849 aa20.05■□□□□ 0.8
PUF60-212ENST00000528320 SOS1Q07889 1333 aaPredicted RBP20.04■□□□□ 0.8
PUF60-212ENST00000528320 CHRNA5P30532 468 aa20.04■□□□□ 0.8
PUF60-212ENST00000528320 USPL1Q5W0Q7 1092 aa20.04■□□□□ 0.8
PUF60-212ENST00000528320 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
PUF60-212ENST00000528320 ZNF496Q96IT1 587 aaPredicted RBP20.04■□□□□ 0.8
PUF60-212ENST00000528320 TEFQ10587 303 aa20.03■□□□□ 0.8
PUF60-212ENST00000528320 RBM46Q8TBY0 533 aaKnown RBP20.03■□□□□ 0.8
PUF60-212ENST00000528320 NARFQ9UHQ1 456 aa20.03■□□□□ 0.8
PUF60-212ENST00000528320 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.79
PUF60-212ENST00000528320 HEG1Q9ULI3 1381 aa20.01■□□□□ 0.79
PUF60-212ENST00000528320 KCNQ3O43525 872 aa20.01■□□□□ 0.79
PUF60-212ENST00000528320 C16orf71Q8IYS4 520 aaPredicted RBP20.01■□□□□ 0.79
PUF60-212ENST00000528320 NFIXQ14938 502 aa20■□□□□ 0.79
PUF60-212ENST00000528320 MCM10Q7L590 875 aa20■□□□□ 0.79
PUF60-212ENST00000528320 MRS2Q9HD23 443 aa20■□□□□ 0.79
PUF60-212ENST00000528320 RNF181Q9P0P0 153 aa20■□□□□ 0.79
PUF60-212ENST00000528320 DCTN1Q14203 1278 aa19.99■□□□□ 0.79
PUF60-212ENST00000528320 NFE2L2Q16236 605 aa19.99■□□□□ 0.79
PUF60-212ENST00000528320 ZBTB1Q9Y2K1 713 aa19.99■□□□□ 0.79
PUF60-212ENST00000528320 BTBD11A6QL63 1104 aa19.98■□□□□ 0.79
PUF60-212ENST00000528320 FSTL1Q12841 308 aa19.98■□□□□ 0.79
PUF60-212ENST00000528320 COL15A1P39059 1388 aa19.97■□□□□ 0.79
PUF60-212ENST00000528320 SERPINB2P05120 415 aa19.97■□□□□ 0.79
PUF60-212ENST00000528320 EIF5P55010 431 aaKnown RBP19.97■□□□□ 0.79
PUF60-212ENST00000528320 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
PUF60-212ENST00000528320 RTF1Q92541 710 aaKnown RBP19.97■□□□□ 0.79
PUF60-212ENST00000528320 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
PUF60-212ENST00000528320 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
PUF60-212ENST00000528320 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
PUF60-212ENST00000528320 BCL2L12Q9HB09 334 aa19.97■□□□□ 0.79
PUF60-212ENST00000528320 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
PUF60-212ENST00000528320 FMNL2Q96PY5 1086 aa19.96■□□□□ 0.79
PUF60-212ENST00000528320 RRAGCQ9HB90 399 aa19.96■□□□□ 0.79
PUF60-212ENST00000528320 STARD3NLO95772 234 aa19.95■□□□□ 0.78
PUF60-212ENST00000528320 DLG5Q8TDM6 1919 aa19.95■□□□□ 0.78
PUF60-212ENST00000528320 ZC3H4Q9UPT8 1303 aaKnown RBP19.95■□□□□ 0.78
PUF60-212ENST00000528320 SBF1O95248 1867 aa19.94■□□□□ 0.78
PUF60-212ENST00000528320 CANXP27824 592 aaKnown RBP19.94■□□□□ 0.78
PUF60-212ENST00000528320 TTLL6Q8N841 843 aa19.94■□□□□ 0.78
PUF60-212ENST00000528320 LMNB1P20700 586 aa19.93■□□□□ 0.78
PUF60-212ENST00000528320 A0A087WZG4 1122 aa19.92■□□□□ 0.78
PUF60-212ENST00000528320 H0YIN7 160 aa19.92■□□□□ 0.78
PUF60-212ENST00000528320 USP16Q9Y5T5 823 aa19.92■□□□□ 0.78
PUF60-212ENST00000528320 AFDNP55196 1824 aaKnown RBP19.92■□□□□ 0.78
PUF60-212ENST00000528320 NRXN2Q9P2S2 1712 aa19.91■□□□□ 0.78
PUF60-212ENST00000528320 IL6STP40189 918 aaPredicted RBP19.91■□□□□ 0.78
PUF60-212ENST00000528320 RASSF7Q02833 373 aa19.91■□□□□ 0.78
PUF60-212ENST00000528320 C2CD5Q86YS7 1000 aa19.91■□□□□ 0.78
PUF60-212ENST00000528320 ADAMTS8Q9UP79 889 aa19.91■□□□□ 0.78
PUF60-212ENST00000528320 PRAMEF22A3QJZ6 481 aa19.9■□□□□ 0.78
PUF60-212ENST00000528320 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
PUF60-212ENST00000528320 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
PUF60-212ENST00000528320 KLRG1Q96E93 195 aa19.9■□□□□ 0.78
PUF60-212ENST00000528320 GLTPD2A6NH11 291 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 A1BGP04217 495 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 NEFMP07197 916 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 PRELPP51888 382 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 BICDL1Q6ZP65 573 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 THUMPD2Q9BTF0 503 aaKnown RBP19.89■□□□□ 0.77
PUF60-212ENST00000528320 MIS18AQ9NYP9 233 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 PDZRN3Q9UPQ7 1066 aa19.89■□□□□ 0.77
PUF60-212ENST00000528320 WDR90Q96KV7 1748 aa19.88■□□□□ 0.77
PUF60-212ENST00000528320 VEGFAP15692 232 aaPredicted RBP19.88■□□□□ 0.77
PUF60-212ENST00000528320 HTRA3P83110 453 aa19.88■□□□□ 0.77
PUF60-212ENST00000528320 JMYQ8N9B5 988 aa19.88■□□□□ 0.77
PUF60-212ENST00000528320 PNISRQ8TF01 805 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms