RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 MBD3O95983 291 aa11.9□□□□□ -0.5
SF3B2-206ENST00000528302 CBX1P83916 185 aa11.9□□□□□ -0.5
SF3B2-206ENST00000528302 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
SF3B2-206ENST00000528302 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
SF3B2-206ENST00000528302 UBTFL1P0CB47 393 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-206ENST00000528302 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
SF3B2-206ENST00000528302 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 KCNJ4P48050 445 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 TNRQ92752 1358 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 LARGE1O95461 756 aa11.89□□□□□ -0.51
SF3B2-206ENST00000528302 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
SF3B2-206ENST00000528302 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
SF3B2-206ENST00000528302 NLRP6P59044 892 aa11.88□□□□□ -0.51
SF3B2-206ENST00000528302 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
SF3B2-206ENST00000528302 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
SF3B2-206ENST00000528302 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-206ENST00000528302 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-206ENST00000528302 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
SF3B2-206ENST00000528302 AK2P54819 239 aa11.88□□□□□ -0.51
SF3B2-206ENST00000528302 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
SF3B2-206ENST00000528302 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
SF3B2-206ENST00000528302 RGS12O14924 1447 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 STK3Q13188 491 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 PTPRCP08575 1304 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 COL9A3Q14050 684 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-206ENST00000528302 EID1Q9Y6B2 187 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 USP32Q8NFA0 1604 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-206ENST00000528302 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
SF3B2-206ENST00000528302 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
SF3B2-206ENST00000528302 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 EYA1Q99502 592 aa11.87□□□□□ -0.51
SF3B2-206ENST00000528302 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
SF3B2-206ENST00000528302 IBTKQ9P2D0 1353 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-206ENST00000528302 SYT1P21579 422 aa11.86□□□□□ -0.51
SF3B2-206ENST00000528302 HDGFL1Q5TGJ6 251 aa11.86□□□□□ -0.51
SF3B2-206ENST00000528302 SASS6Q6UVJ0 657 aa11.86□□□□□ -0.51
SF3B2-206ENST00000528302 DRC7Q8IY82 874 aa11.86□□□□□ -0.51
SF3B2-206ENST00000528302 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
SF3B2-206ENST00000528302 TFIP11Q9UBB9 837 aaKnown RBP11.86□□□□□ -0.51
SF3B2-206ENST00000528302 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
SF3B2-206ENST00000528302 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
SF3B2-206ENST00000528302 CEBPZQ03701 1054 aaKnown RBP11.85□□□□□ -0.51
SF3B2-206ENST00000528302 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
SF3B2-206ENST00000528302 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
SF3B2-206ENST00000528302 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
SF3B2-206ENST00000528302 TCHHQ07283 1943 aa11.85□□□□□ -0.51
SF3B2-206ENST00000528302 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
SF3B2-206ENST00000528302 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-206ENST00000528302 SIL1Q9H173 461 aa11.85□□□□□ -0.51
SF3B2-206ENST00000528302 STX6O43752 255 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 GNAI3P08754 354 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 SNX14Q9Y5W7 946 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 EDC4Q6P2E9 1401 aaKnown RBP11.84□□□□□ -0.51
SF3B2-206ENST00000528302 KCNQ3O43525 872 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 GJB2P29033 226 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-206ENST00000528302 PTH1RQ03431 593 aa11.84□□□□□ -0.51
SF3B2-206ENST00000528302 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
SF3B2-206ENST00000528302 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 KCNA6P17658 529 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 PYCARDQ9ULZ3 195 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 A0A087WWV3 80 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 AP5Z1O43299 807 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 PHF14O94880 888 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-206ENST00000528302 MCM2P49736 904 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 CUL4AQ13619 759 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 NDUFB9Q9Y6M9 179 aa11.83□□□□□ -0.52
SF3B2-206ENST00000528302 HS1BP3Q53T59 392 aa11.82□□□□□ -0.52
SF3B2-206ENST00000528302 CCDC183Q5T5S1 534 aa11.82□□□□□ -0.52
SF3B2-206ENST00000528302 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
SF3B2-206ENST00000528302 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
SF3B2-206ENST00000528302 LUZP1Q86V48 1076 aa11.82□□□□□ -0.52
SF3B2-206ENST00000528302 IL17REQ8NFR9 667 aa11.82□□□□□ -0.52
SF3B2-206ENST00000528302 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
SF3B2-206ENST00000528302 CPSF1Q10570 1443 aaKnown RBP11.81□□□□□ -0.52
SF3B2-206ENST00000528302 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 DYNC1I1O14576 645 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 HSPA4P34932 840 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
SF3B2-206ENST00000528302 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 F13A1P00488 732 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 LRMPQ12912 555 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 PDRG1Q9NUG6 133 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms