RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
CHEK1-210ENST00000528276 PROSER3Q2NL68 480 aa17.71■□□□□ 0.43
CHEK1-210ENST00000528276 MAP3K2Q9Y2U5 619 aa17.71■□□□□ 0.43
CHEK1-210ENST00000528276 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
CHEK1-210ENST00000528276 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
CHEK1-210ENST00000528276 DCTPP1Q9H773 170 aa17.7■□□□□ 0.42
CHEK1-210ENST00000528276 THRAP3Q9Y2W1 955 aaKnown RBP17.7■□□□□ 0.42
CHEK1-210ENST00000528276 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
CHEK1-210ENST00000528276 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
CHEK1-210ENST00000528276 USP16Q9Y5T5 823 aa17.7■□□□□ 0.42
CHEK1-210ENST00000528276 PTCD1O75127 700 aaKnown RBP17.69■□□□□ 0.42
CHEK1-210ENST00000528276 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
CHEK1-210ENST00000528276 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
CHEK1-210ENST00000528276 BEND3Q5T5X7 828 aa17.69■□□□□ 0.42
CHEK1-210ENST00000528276 ATP10DQ9P241 1426 aa17.68■□□□□ 0.42
CHEK1-210ENST00000528276 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
CHEK1-210ENST00000528276 PDIA6Q15084 440 aa17.68■□□□□ 0.42
CHEK1-210ENST00000528276 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
CHEK1-210ENST00000528276 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
CHEK1-210ENST00000528276 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
CHEK1-210ENST00000528276 JCADQ9P266 1359 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 ALDH1L1O75891 902 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 DDB1Q16531 1140 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 SPATA31A1Q5TZJ5 1347 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 ADCY9O60503 1353 aa17.67■□□□□ 0.42
CHEK1-210ENST00000528276 COPS6Q7L5N1 327 aa17.66■□□□□ 0.42
CHEK1-210ENST00000528276 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
CHEK1-210ENST00000528276 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
CHEK1-210ENST00000528276 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
CHEK1-210ENST00000528276 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 CACNA1FO60840 1977 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 APBB1O00213 710 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 ANKRD13DQ6ZTN6 518 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 CERKQ8TCT0 537 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
CHEK1-210ENST00000528276 UPF2Q9HAU5 1272 aaKnown RBP17.65■□□□□ 0.42
CHEK1-210ENST00000528276 PIGBQ92521 554 aa17.63■□□□□ 0.41
CHEK1-210ENST00000528276 TEX13AQ9BXU3 409 aaPredicted RBP17.63■□□□□ 0.41
CHEK1-210ENST00000528276 SPATA31A5Q5VU36 1347 aa17.63■□□□□ 0.41
CHEK1-210ENST00000528276 SPATA31A7Q8IWB4 1347 aa17.63■□□□□ 0.41
CHEK1-210ENST00000528276 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
CHEK1-210ENST00000528276 A0A0G2JS52 829 aa17.62■□□□□ 0.41
CHEK1-210ENST00000528276 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
CHEK1-210ENST00000528276 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
CHEK1-210ENST00000528276 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
CHEK1-210ENST00000528276 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
CHEK1-210ENST00000528276 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
CHEK1-210ENST00000528276 STARD3NLO95772 234 aa17.61■□□□□ 0.41
CHEK1-210ENST00000528276 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
CHEK1-210ENST00000528276 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
CHEK1-210ENST00000528276 MYD88Q99836 296 aa17.61■□□□□ 0.41
CHEK1-210ENST00000528276 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
CHEK1-210ENST00000528276 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
CHEK1-210ENST00000528276 SPATA31A6Q5VVP1 1343 aa17.6■□□□□ 0.41
CHEK1-210ENST00000528276 PNMA6EA0A0J9YXQ4 647 aa17.6■□□□□ 0.41
CHEK1-210ENST00000528276 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
CHEK1-210ENST00000528276 PLCH1Q4KWH8 1693 aa17.6■□□□□ 0.41
CHEK1-210ENST00000528276 SLIT2O94813 1529 aa17.59■□□□□ 0.41
CHEK1-210ENST00000528276 GRM8O00222 908 aa17.59■□□□□ 0.41
CHEK1-210ENST00000528276 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
CHEK1-210ENST00000528276 PLBD2Q8NHP8 589 aa17.59■□□□□ 0.41
CHEK1-210ENST00000528276 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
CHEK1-210ENST00000528276 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
CHEK1-210ENST00000528276 A1BGP04217 495 aa17.58■□□□□ 0.41
CHEK1-210ENST00000528276 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.41
CHEK1-210ENST00000528276 BMP2KLQ5H9B9 411 aa17.58■□□□□ 0.41
CHEK1-210ENST00000528276 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.41
CHEK1-210ENST00000528276 ATG3Q9NT62 314 aa17.58■□□□□ 0.41
CHEK1-210ENST00000528276 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
CHEK1-210ENST00000528276 MYT1Q01538 1121 aa17.57■□□□□ 0.4
CHEK1-210ENST00000528276 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
CHEK1-210ENST00000528276 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
CHEK1-210ENST00000528276 IPO9Q96P70 1041 aaKnown RBP17.57■□□□□ 0.4
CHEK1-210ENST00000528276 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
CHEK1-210ENST00000528276 C5P01031 1676 aa17.57■□□□□ 0.4
CHEK1-210ENST00000528276 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
CHEK1-210ENST00000528276 KCPQ6ZWJ8 1503 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
CHEK1-210ENST00000528276 VPS72Q15906 364 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 LRP10Q7Z4F1 713 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 BCL9O00512 1426 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 RAB11FIP3O75154 756 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 IGKV5-2P06315 115 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
CHEK1-210ENST00000528276 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
CHEK1-210ENST00000528276 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
CHEK1-210ENST00000528276 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
CHEK1-210ENST00000528276 GCKRQ14397 625 aa17.55■□□□□ 0.4
CHEK1-210ENST00000528276 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
CHEK1-210ENST00000528276 C16orf71Q8IYS4 520 aaPredicted RBP17.55■□□□□ 0.4
CHEK1-210ENST00000528276 ARXQ96QS3 562 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms