RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 NCAPD2Q15021 1401 aa9.67□□□□□ -0.86
PTP4A2-210ENST00000528253 IGSF1Q8N6C5 1336 aa9.67□□□□□ -0.86
PTP4A2-210ENST00000528253 TXNRD1Q16881 649 aa9.67□□□□□ -0.86
PTP4A2-210ENST00000528253 PLEKHO1Q53GL0 409 aaPredicted RBP9.67□□□□□ -0.86
PTP4A2-210ENST00000528253 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
PTP4A2-210ENST00000528253 SRCAPQ6ZRS2 3230 aa9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 CYP27B1O15528 508 aa9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 IL13P35225 146 aa9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 AMOTQ4VCS5 1084 aa9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 IER5LQ5T953 404 aa9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 SULT6B1Q6IMI4 303 aa9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
PTP4A2-210ENST00000528253 PLEKHG2Q9H7P9 1386 aa9.65□□□□□ -0.86
PTP4A2-210ENST00000528253 HMGB2P26583 209 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-210ENST00000528253 MPRIPQ6WCQ1 1025 aa9.65□□□□□ -0.86
PTP4A2-210ENST00000528253 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
PTP4A2-210ENST00000528253 STK32BQ9NY57 414 aa9.65□□□□□ -0.86
PTP4A2-210ENST00000528253 LY75O60449 1722 aa9.65□□□□□ -0.87
PTP4A2-210ENST00000528253 HSP90AB1P08238 724 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-210ENST00000528253 PHKG2P15735 406 aa9.64□□□□□ -0.87
PTP4A2-210ENST00000528253 SLC27A3Q5K4L6 730 aa9.64□□□□□ -0.87
PTP4A2-210ENST00000528253 C1orf141Q5JVX7 400 aa9.63□□□□□ -0.87
PTP4A2-210ENST00000528253 ZNF530Q6P9A1 599 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-210ENST00000528253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTP4A2-210ENST00000528253 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
PTP4A2-210ENST00000528253 SMARCC1Q92922 1105 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-210ENST00000528253 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 G3V3G9 751 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 HMOX1P09601 288 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 SLC15A2Q16348 729 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 TMOD3Q9NYL9 352 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 ARIH1Q9Y4X5 557 aaPredicted RBP9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 KDRP35968 1356 aa9.62□□□□□ -0.87
PTP4A2-210ENST00000528253 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 SCN11AQ9UI33 1791 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 ERVV-2B6SEH9 535 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 PPP2R1AP30153 589 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 SMYD5Q6GMV2 418 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 LRRC4BQ9NT99 713 aa9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 CCNL1Q9UK58 526 aaPredicted RBP9.61□□□□□ -0.87
PTP4A2-210ENST00000528253 LRP5O75197 1615 aa9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 SNPHO15079 494 aa9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 EMP3P54852 163 aa9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 PIGBQ92521 554 aa9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
PTP4A2-210ENST00000528253 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 CABP4P57796 275 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 AKAP4Q5JQC9 854 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 SPON1Q9HCB6 807 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 TFCP2L1Q9NZI6 479 aa9.59□□□□□ -0.87
PTP4A2-210ENST00000528253 C5P01031 1676 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 SEMA3EO15041 775 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 KCNQ4P56696 695 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 RALBP1Q15311 655 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 PALLDQ8WX93 1383 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 CASZ1Q86V15 1759 aa9.58□□□□□ -0.88
PTP4A2-210ENST00000528253 PAPPAQ13219 1627 aa9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 TUBGCP6Q96RT7 1819 aa9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 U2AF1L5P0DN76 240 aaPredicted RBP9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 PLCG2P16885 1265 aa9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 U2AF1Q01081 240 aaKnown RBP eCLIP9.57□□□□□ -0.881e-7■□□□□ 9.5
PTP4A2-210ENST00000528253 MTHFSDQ2M296 383 aaKnown RBP9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 DPY19L2Q6NUT2 758 aa9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 ASAP1Q9ULH1 1129 aa9.57□□□□□ -0.88
PTP4A2-210ENST00000528253 LOC102724428A0A0B4J2F2 783 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 FCHSD2O94868 740 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 ZBTB7AO95365 584 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 NEFMP07197 916 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 SIK1P57059 783 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 ZNF827Q17R98 1081 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 NFATC2IPQ8NCF5 419 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 ATG3Q9NT62 314 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 BOLA1Q9Y3E2 137 aa9.56□□□□□ -0.88
PTP4A2-210ENST00000528253 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
PTP4A2-210ENST00000528253 SLC16A10Q8TF71 515 aa9.55□□□□□ -0.88
PTP4A2-210ENST00000528253 PDGFDQ9GZP0 370 aaPredicted RBP9.55□□□□□ -0.88
PTP4A2-210ENST00000528253 MTFR1LQ9H019 292 aa9.55□□□□□ -0.88
PTP4A2-210ENST00000528253 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
PTP4A2-210ENST00000528253 LGR6Q9HBX8 967 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms