RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 IL17REQ8NFR9 667 aa34.77■■■■□ 3.16
TRIM3-206ENST00000528227 SIPA1L3O60292 1781 aaPredicted RBP34.77■■■■□ 3.16
TRIM3-206ENST00000528227 TTC5Q8N0Z6 440 aa34.76■■■■□ 3.16
TRIM3-206ENST00000528227 NARFQ9UHQ1 456 aa34.75■■■■□ 3.15
TRIM3-206ENST00000528227 ARFGEF1Q9Y6D6 1849 aa34.75■■■■□ 3.15
TRIM3-206ENST00000528227 TEFQ10587 303 aa34.74■■■■□ 3.15
TRIM3-206ENST00000528227 CFAP53Q96M91 514 aa34.74■■■■□ 3.15
TRIM3-206ENST00000528227 ARHGAP27Q6ZUM4 889 aa34.73■■■■□ 3.15
TRIM3-206ENST00000528227 PIM2Q9P1W9 311 aa34.73■■■■□ 3.15
TRIM3-206ENST00000528227 RSPH6AQ9H0K4 717 aa34.71■■■■□ 3.15
TRIM3-206ENST00000528227 PRKAR2BP31323 418 aa34.7■■■■□ 3.15
TRIM3-206ENST00000528227 ZNF790Q6PG37 636 aa34.7■■■■□ 3.15
TRIM3-206ENST00000528227 ZNF496Q96IT1 587 aaPredicted RBP34.7■■■■□ 3.15
TRIM3-206ENST00000528227 PHACTR3Q96KR7 559 aa34.7■■■■□ 3.15
TRIM3-206ENST00000528227 BCL2L12Q9HB09 334 aa34.7■■■■□ 3.15
TRIM3-206ENST00000528227 AFDNP55196 1824 aaKnown RBP34.69■■■■□ 3.14
TRIM3-206ENST00000528227 STARD3NLO95772 234 aa34.69■■■■□ 3.14
TRIM3-206ENST00000528227 CANXP27824 592 aaKnown RBP34.69■■■■□ 3.14
TRIM3-206ENST00000528227 NFIXQ14938 502 aa34.69■■■■□ 3.14
TRIM3-206ENST00000528227 CEMIPQ8WUJ3 1361 aa34.69■■■■□ 3.14
TRIM3-206ENST00000528227 NRXN2Q9P2S2 1712 aa34.69■■■■□ 3.14
TRIM3-206ENST00000528227 CHRNA5P30532 468 aa34.68■■■■□ 3.14
TRIM3-206ENST00000528227 HEG1Q9ULI3 1381 aa34.68■■■■□ 3.14
TRIM3-206ENST00000528227 DALRD3Q5D0E6 543 aaKnown RBP34.67■■■■□ 3.14
TRIM3-206ENST00000528227 PPP2R1AP30153 589 aa34.66■■■■□ 3.14
TRIM3-206ENST00000528227 NUDCQ9Y266 331 aa34.66■■■■□ 3.14
TRIM3-206ENST00000528227 EIF5P55010 431 aaKnown RBP34.65■■■■□ 3.14
TRIM3-206ENST00000528227 KIF3CO14782 793 aa34.64■■■■□ 3.14
TRIM3-206ENST00000528227 TEX13AQ9BXU3 409 aaPredicted RBP34.64■■■■□ 3.14
TRIM3-206ENST00000528227 A0A087WZG4 1122 aa34.61■■■■□ 3.13
TRIM3-206ENST00000528227 SERPINB2P05120 415 aa34.61■■■■□ 3.13
TRIM3-206ENST00000528227 FMNL2Q96PY5 1086 aa34.61■■■■□ 3.13
TRIM3-206ENST00000528227 U2AF1L5P0DN76 240 aaPredicted RBP34.6■■■■□ 3.13
TRIM3-206ENST00000528227 U2AF1Q01081 240 aaKnown RBP eCLIP34.6■■■■□ 3.13
TRIM3-206ENST00000528227 SCN7AQ01118 1682 aa34.59■■■■□ 3.13
TRIM3-206ENST00000528227 BTBD11A6QL63 1104 aa34.58■■■■□ 3.13
TRIM3-206ENST00000528227 C9orf131Q5VYM1 1079 aa34.58■■■■□ 3.13
TRIM3-206ENST00000528227 DLEC1Q9Y238 1755 aa34.57■■■■□ 3.12
TRIM3-206ENST00000528227 KCNQ3O43525 872 aa34.57■■■■□ 3.12
TRIM3-206ENST00000528227 IL6STP40189 918 aaPredicted RBP34.56■■■■□ 3.12
TRIM3-206ENST00000528227 HSPA6P17066 643 aa34.55■■■■□ 3.12
TRIM3-206ENST00000528227 BICDL1Q6ZP65 573 aa34.54■■■■□ 3.12
TRIM3-206ENST00000528227 CARMIL3Q8ND23 1372 aa34.53■■■■□ 3.12
TRIM3-206ENST00000528227 ZNF330Q9Y3S2 320 aaPredicted RBP34.53■■■■□ 3.12
TRIM3-206ENST00000528227 A1BGP04217 495 aa34.52■■■■□ 3.12
TRIM3-206ENST00000528227 TBC1D9BQ66K14 1250 aa34.52■■■■□ 3.12
TRIM3-206ENST00000528227 TBC1D2BQ9UPU7 963 aa34.52■■■■□ 3.12
TRIM3-206ENST00000528227 MCM10Q7L590 875 aa34.51■■■■□ 3.12
TRIM3-206ENST00000528227 RTF1Q92541 710 aaKnown RBP34.51■■■■□ 3.12
TRIM3-206ENST00000528227 SBF1O95248 1867 aa34.5■■■■□ 3.11
TRIM3-206ENST00000528227 NMRK2Q9NPI5 230 aa34.5■■■■□ 3.11
TRIM3-206ENST00000528227 RNF181Q9P0P0 153 aa34.5■■■■□ 3.11
TRIM3-206ENST00000528227 CEP350Q5VT06 3117 aa34.48■■■■□ 3.11
TRIM3-206ENST00000528227 C2CD5Q86YS7 1000 aa34.48■■■■□ 3.11
TRIM3-206ENST00000528227 USP16Q9Y5T5 823 aa34.47■■■■□ 3.11
TRIM3-206ENST00000528227 ANKRD31Q8N7Z5 1873 aa34.47■■■■□ 3.11
TRIM3-206ENST00000528227 BCORQ6W2J9 1755 aa34.46■■■■□ 3.11
TRIM3-206ENST00000528227 HTATSF1O43719 755 aaKnown RBP34.46■■■■□ 3.11
TRIM3-206ENST00000528227 TOMM70O94826 608 aa34.46■■■■□ 3.11
TRIM3-206ENST00000528227 TTLL6Q8N841 843 aa34.46■■■■□ 3.11
TRIM3-206ENST00000528227 H0YIN7 160 aa34.45■■■■□ 3.11
TRIM3-206ENST00000528227 CAMTA2O94983 1202 aa34.45■■■■□ 3.11
TRIM3-206ENST00000528227 DCTN1Q14203 1278 aa34.45■■■■□ 3.11
TRIM3-206ENST00000528227 NPM2Q86SE8 214 aaKnown RBP34.45■■■■□ 3.11
TRIM3-206ENST00000528227 PRAMEF22A3QJZ6 481 aa34.44■■■■□ 3.1
TRIM3-206ENST00000528227 RASSF7Q02833 373 aa34.43■■■■□ 3.1
TRIM3-206ENST00000528227 PRR5LQ6MZQ0 368 aa34.43■■■■□ 3.1
TRIM3-206ENST00000528227 SNRPA1P09661 255 aaKnown RBP34.42■■■■□ 3.1
TRIM3-206ENST00000528227 PIP4K2AP48426 406 aaPredicted RBP34.41■■■■□ 3.1
TRIM3-206ENST00000528227 DZIP3Q86Y13 1208 aaKnown RBP34.41■■■■□ 3.1
TRIM3-206ENST00000528227 BRIP1Q9BX63 1249 aa34.41■■■■□ 3.1
TRIM3-206ENST00000528227 KDM2BQ8NHM5 1336 aa34.4■■■■□ 3.1
TRIM3-206ENST00000528227 COL11A2P13942 1736 aaPredicted RBP34.39■■■■□ 3.1
TRIM3-206ENST00000528227 PDE6BP35913 854 aa34.39■■■■□ 3.1
TRIM3-206ENST00000528227 SETDB2Q96T68 719 aa34.39■■■■□ 3.1
TRIM3-206ENST00000528227 PDZRN3Q9UPQ7 1066 aa34.39■■■■□ 3.1
TRIM3-206ENST00000528227 CCDC24Q8N4L8 307 aa34.38■■■■□ 3.09
TRIM3-206ENST00000528227 LMNB1P20700 586 aa34.37■■■■□ 3.09
TRIM3-206ENST00000528227 PRELPP51888 382 aa34.37■■■■□ 3.09
TRIM3-206ENST00000528227 TNRC6CQ9HCJ0 1690 aaKnown RBP34.37■■■■□ 3.09
TRIM3-206ENST00000528227 ZC3H4Q9UPT8 1303 aaKnown RBP34.36■■■■□ 3.09
TRIM3-206ENST00000528227 DLG5Q8TDM6 1919 aa34.36■■■■□ 3.09
TRIM3-206ENST00000528227 TAF7Q15545 349 aaPredicted RBP34.36■■■■□ 3.09
TRIM3-206ENST00000528227 CNBD1Q8NA66 436 aa34.35■■■■□ 3.09
TRIM3-206ENST00000528227 RBM46Q8TBY0 533 aaKnown RBP34.34■■■■□ 3.09
TRIM3-206ENST00000528227 ZNF622Q969S3 477 aaKnown RBP eCLIP34.34■■■■□ 3.09
TRIM3-206ENST00000528227 NFKBIEO00221 500 aa34.33■■■■□ 3.09
TRIM3-206ENST00000528227 NEFMP07197 916 aa34.33■■■■□ 3.09
TRIM3-206ENST00000528227 CLEC4GQ6UXB4 293 aa34.33■■■■□ 3.09
TRIM3-206ENST00000528227 PLEKHF1Q96S99 279 aa34.33■■■■□ 3.09
TRIM3-206ENST00000528227 NBPF26B4DH59 902 aa34.32■■■■□ 3.08
TRIM3-206ENST00000528227 APLP1P51693 650 aa34.32■■■■□ 3.08
TRIM3-206ENST00000528227 NBPF10Q6P3W6 841 aaKnown RBP34.32■■■■□ 3.08
TRIM3-206ENST00000528227 C16orf71Q8IYS4 520 aaPredicted RBP34.32■■■■□ 3.08
TRIM3-206ENST00000528227 NBPF15Q8N660 670 aa34.32■■■■□ 3.08
TRIM3-206ENST00000528227 RRAGCQ9HB90 399 aa34.32■■■■□ 3.08
TRIM3-206ENST00000528227 LAMB4A4D0S4 1761 aa34.31■■■■□ 3.08
TRIM3-206ENST00000528227 TIAM2Q8IVF5 1701 aa34.31■■■■□ 3.08
TRIM3-206ENST00000528227 NPHP1O15259 732 aa34.31■■■■□ 3.08
TRIM3-206ENST00000528227 ST5P78524 1137 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms