RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 CHD4Q14839 1912 aa31.91■■■□□ 2.7
PACSIN3-204ENST00000528201 BTBD11A6QL63 1104 aa31.91■■■□□ 2.7
PACSIN3-204ENST00000528201 CANXP27824 592 aaKnown RBP31.91■■■□□ 2.7
PACSIN3-204ENST00000528201 BCL2L12Q9HB09 334 aa31.9■■■□□ 2.7
PACSIN3-204ENST00000528201 PLEKHF1Q96S99 279 aa31.89■■■□□ 2.7
PACSIN3-204ENST00000528201 A0A0G2JLW4 131 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 ZPR1O75312 459 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 STARD3NLO95772 234 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 TM4SF1P30408 202 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 RTF1Q92541 710 aaKnown RBP31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 FMNL2Q96PY5 1086 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 NARFQ9UHQ1 456 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 KIAA1551Q9HCM1 1747 aa31.88■■■□□ 2.69
PACSIN3-204ENST00000528201 POLRMTO00411 1230 aaKnown RBP31.87■■■□□ 2.69
PACSIN3-204ENST00000528201 EIF5P55010 431 aaKnown RBP31.87■■■□□ 2.69
PACSIN3-204ENST00000528201 TGFB2P61812 414 aa31.87■■■□□ 2.69
PACSIN3-204ENST00000528201 KIF13BQ9NQT8 1826 aa31.86■■■□□ 2.69
PACSIN3-204ENST00000528201 HTATSF1O43719 755 aaKnown RBP31.85■■■□□ 2.69
PACSIN3-204ENST00000528201 DPEP1P16444 411 aa31.85■■■□□ 2.69
PACSIN3-204ENST00000528201 RALBP1Q15311 655 aa31.85■■■□□ 2.69
PACSIN3-204ENST00000528201 NFIXQ14938 502 aa31.84■■■□□ 2.69
PACSIN3-204ENST00000528201 PRAMEF22A3QJZ6 481 aa31.83■■■□□ 2.69
PACSIN3-204ENST00000528201 A1BGP04217 495 aa31.83■■■□□ 2.69
PACSIN3-204ENST00000528201 TEX13AQ9BXU3 409 aaPredicted RBP31.82■■■□□ 2.68
PACSIN3-204ENST00000528201 KCNA3P22001 575 aa31.81■■■□□ 2.68
PACSIN3-204ENST00000528201 USP16Q9Y5T5 823 aa31.8■■■□□ 2.68
PACSIN3-204ENST00000528201 NFE2L2Q16236 605 aa31.78■■■□□ 2.68
PACSIN3-204ENST00000528201 MIS18AQ9NYP9 233 aa31.78■■■□□ 2.68
PACSIN3-204ENST00000528201 N4BP2Q86UW6 1770 aaPredicted RBP31.78■■■□□ 2.68
PACSIN3-204ENST00000528201 THUMPD2Q9BTF0 503 aaKnown RBP31.77■■■□□ 2.68
PACSIN3-204ENST00000528201 BCS1LQ9Y276 419 aa31.77■■■□□ 2.68
PACSIN3-204ENST00000528201 ZNF330Q9Y3S2 320 aaPredicted RBP31.77■■■□□ 2.68
PACSIN3-204ENST00000528201 IL6STP40189 918 aaPredicted RBP31.76■■■□□ 2.67
PACSIN3-204ENST00000528201 PIP4K2AP48426 406 aaPredicted RBP31.76■■■□□ 2.67
PACSIN3-204ENST00000528201 TAF7Q15545 349 aaPredicted RBP31.76■■■□□ 2.67
PACSIN3-204ENST00000528201 TBC1D2BQ9UPU7 963 aa31.76■■■□□ 2.67
PACSIN3-204ENST00000528201 ADCY9O60503 1353 aa31.74■■■□□ 2.67
PACSIN3-204ENST00000528201 A0A087WZG4 1122 aa31.74■■■□□ 2.67
PACSIN3-204ENST00000528201 NEFMP07197 916 aa31.74■■■□□ 2.67
PACSIN3-204ENST00000528201 CHRNA5P30532 468 aa31.74■■■□□ 2.67
PACSIN3-204ENST00000528201 MYBBP1AQ9BQG0 1328 aaKnown RBP31.74■■■□□ 2.67
PACSIN3-204ENST00000528201 SNRPA1P09661 255 aaKnown RBP31.73■■■□□ 2.67
PACSIN3-204ENST00000528201 TBC1D9BQ66K14 1250 aa31.72■■■□□ 2.67
PACSIN3-204ENST00000528201 BICDL1Q6ZP65 573 aa31.72■■■□□ 2.67
PACSIN3-204ENST00000528201 ATP10DQ9P241 1426 aa31.72■■■□□ 2.67
PACSIN3-204ENST00000528201 SERPINB2P05120 415 aa31.71■■■□□ 2.67
PACSIN3-204ENST00000528201 CAMTA2O94983 1202 aa31.7■■■□□ 2.67
PACSIN3-204ENST00000528201 MAPK8IP3Q9UPT6 1336 aa31.7■■■□□ 2.66
PACSIN3-204ENST00000528201 CARMIL3Q8ND23 1372 aa31.68■■■□□ 2.66
PACSIN3-204ENST00000528201 NBPF26B4DH59 902 aa31.68■■■□□ 2.66
PACSIN3-204ENST00000528201 NBPF10Q6P3W6 841 aaKnown RBP31.68■■■□□ 2.66
PACSIN3-204ENST00000528201 NBPF15Q8N660 670 aa31.68■■■□□ 2.66
PACSIN3-204ENST00000528201 PNNQ9H307 717 aaKnown RBP31.68■■■□□ 2.66
PACSIN3-204ENST00000528201 PIM2Q9P1W9 311 aa31.68■■■□□ 2.66
PACSIN3-204ENST00000528201 NRXN2Q9P2S2 1712 aa31.66■■■□□ 2.66
PACSIN3-204ENST00000528201 SCN7AQ01118 1682 aa31.66■■■□□ 2.66
PACSIN3-204ENST00000528201 DZIP3Q86Y13 1208 aaKnown RBP31.65■■■□□ 2.66
PACSIN3-204ENST00000528201 BRCA1P38398 1863 aaKnown RBP31.65■■■□□ 2.66
PACSIN3-204ENST00000528201 DLG5Q8TDM6 1919 aa31.65■■■□□ 2.66
PACSIN3-204ENST00000528201 DALRD3Q5D0E6 543 aaKnown RBP31.64■■■□□ 2.66
PACSIN3-204ENST00000528201 ARHGAP27Q6ZUM4 889 aa31.64■■■□□ 2.66
PACSIN3-204ENST00000528201 AFDNP55196 1824 aaKnown RBP31.63■■■□□ 2.65
PACSIN3-204ENST00000528201 PNISRQ8TF01 805 aaKnown RBP31.63■■■□□ 2.65
PACSIN3-204ENST00000528201 EIF4A1P60842 406 aaKnown RBP31.62■■■□□ 2.65
PACSIN3-204ENST00000528201 PRKRIP1Q9H875 184 aaPredicted RBP31.62■■■□□ 2.65
PACSIN3-204ENST00000528201 GIGYF1O75420 1035 aaPredicted RBP31.61■■■□□ 2.65
PACSIN3-204ENST00000528201 RIPK4P57078 832 aa31.61■■■□□ 2.65
PACSIN3-204ENST00000528201 CCDC146Q8IYE0 955 aa31.61■■■□□ 2.65
PACSIN3-204ENST00000528201 CCDC24Q8N4L8 307 aa31.61■■■□□ 2.65
PACSIN3-204ENST00000528201 TMPOP42166 694 aaKnown RBP31.6■■■□□ 2.65
PACSIN3-204ENST00000528201 ZNF526Q8TF50 670 aaPredicted RBP31.6■■■□□ 2.65
PACSIN3-204ENST00000528201 C1QTNF8P60827 252 aa31.59■■■□□ 2.65
PACSIN3-204ENST00000528201 PRR5LQ6MZQ0 368 aa31.59■■■□□ 2.65
PACSIN3-204ENST00000528201 NPM2Q86SE8 214 aaKnown RBP31.59■■■□□ 2.65
PACSIN3-204ENST00000528201 RRP7AQ9Y3A4 280 aaKnown RBP31.59■■■□□ 2.65
PACSIN3-204ENST00000528201 KDM3BQ7LBC6 1761 aa31.58■■■□□ 2.65
PACSIN3-204ENST00000528201 C2CD5Q86YS7 1000 aa31.56■■■□□ 2.64
PACSIN3-204ENST00000528201 SETDB2Q96T68 719 aa31.56■■■□□ 2.64
PACSIN3-204ENST00000528201 GPBP1L1Q9HC44 474 aaPredicted RBP31.55■■■□□ 2.64
PACSIN3-204ENST00000528201 ADAMTS8Q9UP79 889 aa31.55■■■□□ 2.64
PACSIN3-204ENST00000528201 BCORQ6W2J9 1755 aa31.53■■■□□ 2.64
PACSIN3-204ENST00000528201 BRIP1Q9BX63 1249 aa31.53■■■□□ 2.64
PACSIN3-204ENST00000528201 TSPYL4Q9UJ04 414 aa31.53■■■□□ 2.64
PACSIN3-204ENST00000528201 WDR43Q15061 677 aaKnown RBP eCLIP31.52■■■□□ 2.64
PACSIN3-204ENST00000528201 CLEC4GQ6UXB4 293 aa31.52■■■□□ 2.64
PACSIN3-204ENST00000528201 ARFGEF1Q9Y6D6 1849 aa31.52■■■□□ 2.64
PACSIN3-204ENST00000528201 HLFQ16534 295 aa31.51■■■□□ 2.63
PACSIN3-204ENST00000528201 CNBD1Q8NA66 436 aa31.51■■■□□ 2.63
PACSIN3-204ENST00000528201 H0YIN7 160 aa31.5■■■□□ 2.63
PACSIN3-204ENST00000528201 NEUROD2Q15784 382 aa31.5■■■□□ 2.63
PACSIN3-204ENST00000528201 C9orf131Q5VYM1 1079 aa31.5■■■□□ 2.63
PACSIN3-204ENST00000528201 RUNDC1Q96C34 613 aa31.5■■■□□ 2.63
PACSIN3-204ENST00000528201 LAMB4A4D0S4 1761 aa31.49■■■□□ 2.63
PACSIN3-204ENST00000528201 NGEFQ8N5V2 710 aa31.49■■■□□ 2.63
PACSIN3-204ENST00000528201 TTLL6Q8N841 843 aa31.49■■■□□ 2.63
PACSIN3-204ENST00000528201 TRIM35Q9UPQ4 493 aa31.49■■■□□ 2.63
PACSIN3-204ENST00000528201 ANKRD31Q8N7Z5 1873 aa31.48■■■□□ 2.63
PACSIN3-204ENST00000528201 LMOD3Q0VAK6 560 aa31.48■■■□□ 2.63
PACSIN3-204ENST00000528201 ZNF652Q9Y2D9 606 aa31.48■■■□□ 2.63
PACSIN3-204ENST00000528201 TTLL7Q6ZT98 887 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms