RNA–Protein interactions for RNA: ENST00000527944.1

NCAPD3-206, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 2

Gene NCAPD3, Length 773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-206ENST00000527944 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
NCAPD3-206ENST00000527944 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
NCAPD3-206ENST00000527944 TTC5Q8N0Z6 440 aa13.66□□□□□ -0.22
NCAPD3-206ENST00000527944 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
NCAPD3-206ENST00000527944 NECTIN2Q92692 538 aa13.66□□□□□ -0.22
NCAPD3-206ENST00000527944 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
NCAPD3-206ENST00000527944 C5P01031 1676 aa13.65□□□□□ -0.22
NCAPD3-206ENST00000527944 CABP4P57796 275 aa13.64□□□□□ -0.23
NCAPD3-206ENST00000527944 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
NCAPD3-206ENST00000527944 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
NCAPD3-206ENST00000527944 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
NCAPD3-206ENST00000527944 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
NCAPD3-206ENST00000527944 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
NCAPD3-206ENST00000527944 CYP27B1O15528 508 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 PDE4AP27815 886 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 ZNF790Q6PG37 636 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 G2E3Q7L622 706 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 NWD2Q9ULI1 1742 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 PAPPAQ13219 1627 aa13.63□□□□□ -0.23
NCAPD3-206ENST00000527944 HEG1Q9ULI3 1381 aa13.62□□□□□ -0.23
NCAPD3-206ENST00000527944 KCNQ3O43525 872 aa13.62□□□□□ -0.23
NCAPD3-206ENST00000527944 GNAI3P08754 354 aa13.62□□□□□ -0.23
NCAPD3-206ENST00000527944 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
NCAPD3-206ENST00000527944 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
NCAPD3-206ENST00000527944 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
NCAPD3-206ENST00000527944 HMMRO75330 724 aa13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
NCAPD3-206ENST00000527944 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 F6X3S4 739 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 SKAP1Q86WV1 359 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 LRP6O75581 1613 aa13.6□□□□□ -0.23
NCAPD3-206ENST00000527944 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
NCAPD3-206ENST00000527944 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
NCAPD3-206ENST00000527944 UBAP1LF5GYI3 381 aa13.59□□□□□ -0.23
NCAPD3-206ENST00000527944 ANKRD44Q8N8A2 993 aa13.59□□□□□ -0.23
NCAPD3-206ENST00000527944 TOGARAM1Q9Y4F4 1720 aa13.59□□□□□ -0.23
NCAPD3-206ENST00000527944 GNAI2P04899 355 aa13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 SLC39A6Q13433 755 aa13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 NKX1-1Q15270 411 aaPredicted RBP13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 DNAAF4Q8WXU2 420 aa13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 MEIS3Q99687 375 aa13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 SRCIN1Q9C0H9 1055 aa13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
NCAPD3-206ENST00000527944 TNS2Q63HR2 1409 aa13.57□□□□□ -0.24
NCAPD3-206ENST00000527944 NUCB1Q02818 461 aa13.57□□□□□ -0.24
NCAPD3-206ENST00000527944 DDX21Q9NR30 783 aaKnown RBP eCLIP13.57□□□□□ -0.24
NCAPD3-206ENST00000527944 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
NCAPD3-206ENST00000527944 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
NCAPD3-206ENST00000527944 CEP85Q6P2H3 762 aa13.56□□□□□ -0.24
NCAPD3-206ENST00000527944 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
NCAPD3-206ENST00000527944 THRAP3Q9Y2W1 955 aaKnown RBP13.56□□□□□ -0.24
NCAPD3-206ENST00000527944 GLI3P10071 1580 aa13.56□□□□□ -0.24
NCAPD3-206ENST00000527944 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
NCAPD3-206ENST00000527944 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
NCAPD3-206ENST00000527944 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
NCAPD3-206ENST00000527944 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
NCAPD3-206ENST00000527944 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
NCAPD3-206ENST00000527944 JCADQ9P266 1359 aa13.55□□□□□ -0.24
NCAPD3-206ENST00000527944 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 ITGB4P16144 1822 aa13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
NCAPD3-206ENST00000527944 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 EXOC5O00471 708 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 ALDH1L1O75891 902 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 NEXNQ0ZGT2 675 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 DCTPP1Q9H773 170 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 ADCY9O60503 1353 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
NCAPD3-206ENST00000527944 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.25
NCAPD3-206ENST00000527944 ANXA1P04083 346 aa13.52□□□□□ -0.25
NCAPD3-206ENST00000527944 SIRT2Q8IXJ6 389 aa13.52□□□□□ -0.25
NCAPD3-206ENST00000527944 UPF2Q9HAU5 1272 aaKnown RBP13.52□□□□□ -0.25
NCAPD3-206ENST00000527944 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
NCAPD3-206ENST00000527944 SLIT2O94813 1529 aa13.52□□□□□ -0.25
NCAPD3-206ENST00000527944 ARFGEF2Q9Y6D5 1785 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms