RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 U2SURPO15042 1029 aaKnown RBP23.53■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 KCNA3P22001 575 aa23.53■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 DALRD3Q5D0E6 543 aaKnown RBP23.53■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 USPL1Q5W0Q7 1092 aa23.53■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 SIPA1L3O60292 1781 aaPredicted RBP23.52■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 HSPA6P17066 643 aa23.52■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 TEFQ10587 303 aa23.52■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 AFDNP55196 1824 aaKnown RBP23.52■■□□□ 1.36
CKLF-CMTM1-202ENST00000527845 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 STARD3NLO95772 234 aa23.51■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 ZBTB1Q9Y2K1 713 aa23.51■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 KIF3CO14782 793 aa23.5■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 TEX13AQ9BXU3 409 aaPredicted RBP23.5■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 A0A087WZG4 1122 aa23.49■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 DLEC1Q9Y238 1755 aa23.49■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 HEG1Q9ULI3 1381 aa23.47■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 SCN7AQ01118 1682 aa23.47■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 NFIXQ14938 502 aa23.46■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 NUDCQ9Y266 331 aa23.46■■□□□ 1.35
CKLF-CMTM1-202ENST00000527845 CEMIPQ8WUJ3 1361 aa23.45■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 CHRNA5P30532 468 aa23.45■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 C9orf131Q5VYM1 1079 aa23.45■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 TOMM70O94826 608 aa23.44■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 EIF5P55010 431 aaKnown RBP23.44■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 FMNL2Q96PY5 1086 aa23.44■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 SERPINB2P05120 415 aa23.43■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 BCL2L12Q9HB09 334 aa23.43■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 KDM2BQ8NHM5 1336 aa23.42■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 ZC3H4Q9UPT8 1303 aaKnown RBP23.42■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 NPM2Q86SE8 214 aaKnown RBP23.42■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 PDZRN3Q9UPQ7 1066 aa23.42■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 SBF1O95248 1867 aa23.42■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 TNRC6CQ9HCJ0 1690 aaKnown RBP23.41■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 PRKAR2BP31323 418 aa23.41■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 IL6STP40189 918 aaPredicted RBP23.41■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 RSPH6AQ9H0K4 717 aa23.41■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 RNF181Q9P0P0 153 aa23.41■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 CEP350Q5VT06 3117 aa23.41■■□□□ 1.34
CKLF-CMTM1-202ENST00000527845 APLP1P51693 650 aa23.39■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 C16orf71Q8IYS4 520 aaPredicted RBP23.39■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 BTBD11A6QL63 1104 aa23.38■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 H0YIN7 160 aa23.38■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 TTLL6Q8N841 843 aa23.38■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 NMRK2Q9NPI5 230 aa23.38■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 CARMIL3Q8ND23 1372 aa23.38■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 RBM46Q8TBY0 533 aaKnown RBP23.37■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 RTF1Q92541 710 aaKnown RBP23.37■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 BCORQ6W2J9 1755 aa23.37■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 C2CD5Q86YS7 1000 aa23.36■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 PPP2R1AP30153 589 aa23.35■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 PHACTR3Q96KR7 559 aa23.35■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 ANKRD31Q8N7Z5 1873 aa23.34■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 PDE6BP35913 854 aa23.34■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 BICDL1Q6ZP65 573 aa23.34■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 LMNB1P20700 586 aa23.33■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 TBC1D9BQ66K14 1250 aa23.33■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 BRIP1Q9BX63 1249 aa23.33■■□□□ 1.33
CKLF-CMTM1-202ENST00000527845 FSTL1Q12841 308 aa23.32■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 TBC1D2BQ9UPU7 963 aa23.32■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 WDR90Q96KV7 1748 aa23.31■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 SETDB2Q96T68 719 aa23.31■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 A1BGP04217 495 aa23.3■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 RASSF7Q02833 373 aa23.3■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 COL11A2P13942 1736 aaPredicted RBP23.3■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 NPHP1O15259 732 aa23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 CAMTA2O94983 1202 aa23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 NEFMP07197 916 aa23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 DZIP3Q86Y13 1208 aaKnown RBP23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 CNBD1Q8NA66 436 aa23.29■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 CCDC88AQ3V6T2 1871 aa23.28■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 ARFGEF2Q9Y6D5 1785 aa23.28■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 RGL2O15211 777 aa23.28■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 ST5P78524 1137 aa23.28■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 ZNF652Q9Y2D9 606 aa23.28■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 KCNQ3O43525 872 aa23.27■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 CLEC4GQ6UXB4 293 aa23.27■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 LAMB4A4D0S4 1761 aa23.27■■□□□ 1.32
CKLF-CMTM1-202ENST00000527845 FER1L6Q2WGJ9 1857 aa23.26■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 MCM10Q7L590 875 aa23.26■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 ZNF622Q969S3 477 aaKnown RBP eCLIP23.26■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 DICER1Q9UPY3 1922 aaKnown RBP23.25■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 GLTPD2A6NH11 291 aa23.25■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 CNKSR1Q969H4 720 aa23.25■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 NFKBIEO00221 500 aa23.24■■□□□ 1.31
CKLF-CMTM1-202ENST00000527845 SOGA3Q5TF21 947 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms