RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
SCN3B-204ENST00000527836 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
SCN3B-204ENST00000527836 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
SCN3B-204ENST00000527836 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
SCN3B-204ENST00000527836 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
SCN3B-204ENST00000527836 COL15A1P39059 1388 aa16.51■□□□□ 0.23
SCN3B-204ENST00000527836 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
SCN3B-204ENST00000527836 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
SCN3B-204ENST00000527836 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
SCN3B-204ENST00000527836 DPEP1P16444 411 aa16.49■□□□□ 0.23
SCN3B-204ENST00000527836 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
SCN3B-204ENST00000527836 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
SCN3B-204ENST00000527836 A0A087WZG4 1122 aa16.48■□□□□ 0.23
SCN3B-204ENST00000527836 HEG1Q9ULI3 1381 aa16.48■□□□□ 0.23
SCN3B-204ENST00000527836 DDR1Q08345 913 aa16.47■□□□□ 0.23
SCN3B-204ENST00000527836 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
SCN3B-204ENST00000527836 MCM10Q7L590 875 aa16.47■□□□□ 0.23
SCN3B-204ENST00000527836 ZNF526Q8TF50 670 aaPredicted RBP16.47■□□□□ 0.23
SCN3B-204ENST00000527836 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
SCN3B-204ENST00000527836 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
SCN3B-204ENST00000527836 ATP10DQ9P241 1426 aa16.46■□□□□ 0.23
SCN3B-204ENST00000527836 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.23
SCN3B-204ENST00000527836 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
SCN3B-204ENST00000527836 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.23
SCN3B-204ENST00000527836 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
SCN3B-204ENST00000527836 TM4SF1P30408 202 aa16.45■□□□□ 0.22
SCN3B-204ENST00000527836 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
SCN3B-204ENST00000527836 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
SCN3B-204ENST00000527836 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
SCN3B-204ENST00000527836 NFIXQ14938 502 aa16.44■□□□□ 0.22
SCN3B-204ENST00000527836 DALRD3Q5D0E6 543 aaKnown RBP16.44■□□□□ 0.22
SCN3B-204ENST00000527836 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
SCN3B-204ENST00000527836 AFDNP55196 1824 aaKnown RBP16.43■□□□□ 0.22
SCN3B-204ENST00000527836 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
SCN3B-204ENST00000527836 NPHP1O15259 732 aa16.43■□□□□ 0.22
SCN3B-204ENST00000527836 KCNQ3O43525 872 aa16.43■□□□□ 0.22
SCN3B-204ENST00000527836 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
SCN3B-204ENST00000527836 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
SCN3B-204ENST00000527836 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
SCN3B-204ENST00000527836 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
SCN3B-204ENST00000527836 BRCA1P38398 1863 aaKnown RBP16.43■□□□□ 0.22
SCN3B-204ENST00000527836 A1BGP04217 495 aa16.42■□□□□ 0.22
SCN3B-204ENST00000527836 SERPINB2P05120 415 aa16.42■□□□□ 0.22
SCN3B-204ENST00000527836 CHRNA5P30532 468 aa16.42■□□□□ 0.22
SCN3B-204ENST00000527836 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
SCN3B-204ENST00000527836 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
SCN3B-204ENST00000527836 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
SCN3B-204ENST00000527836 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
SCN3B-204ENST00000527836 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
SCN3B-204ENST00000527836 RALBP1Q15311 655 aa16.4■□□□□ 0.22
SCN3B-204ENST00000527836 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
SCN3B-204ENST00000527836 KCNA3P22001 575 aa16.39■□□□□ 0.21
SCN3B-204ENST00000527836 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
SCN3B-204ENST00000527836 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
SCN3B-204ENST00000527836 ADCY9O60503 1353 aa16.38■□□□□ 0.21
SCN3B-204ENST00000527836 H0YIN7 160 aa16.38■□□□□ 0.21
SCN3B-204ENST00000527836 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
SCN3B-204ENST00000527836 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
SCN3B-204ENST00000527836 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
SCN3B-204ENST00000527836 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
SCN3B-204ENST00000527836 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
SCN3B-204ENST00000527836 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
SCN3B-204ENST00000527836 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
SCN3B-204ENST00000527836 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
SCN3B-204ENST00000527836 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
SCN3B-204ENST00000527836 PRAMEF22A3QJZ6 481 aa16.36■□□□□ 0.21
SCN3B-204ENST00000527836 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
SCN3B-204ENST00000527836 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
SCN3B-204ENST00000527836 PDE6BP35913 854 aa16.35■□□□□ 0.21
SCN3B-204ENST00000527836 C9orf131Q5VYM1 1079 aa16.35■□□□□ 0.21
SCN3B-204ENST00000527836 TTLL6Q8N841 843 aa16.35■□□□□ 0.21
SCN3B-204ENST00000527836 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
SCN3B-204ENST00000527836 CAMTA2O94983 1202 aa16.34■□□□□ 0.21
SCN3B-204ENST00000527836 ST5P78524 1137 aa16.34■□□□□ 0.21
SCN3B-204ENST00000527836 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
SCN3B-204ENST00000527836 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCN3B-204ENST00000527836 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
SCN3B-204ENST00000527836 PDZRN3Q9UPQ7 1066 aa16.34■□□□□ 0.21
SCN3B-204ENST00000527836 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.2
SCN3B-204ENST00000527836 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
SCN3B-204ENST00000527836 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
SCN3B-204ENST00000527836 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.2
SCN3B-204ENST00000527836 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCN3B-204ENST00000527836 PRR5LQ6MZQ0 368 aa16.32■□□□□ 0.2
SCN3B-204ENST00000527836 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
SCN3B-204ENST00000527836 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
SCN3B-204ENST00000527836 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
SCN3B-204ENST00000527836 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
SCN3B-204ENST00000527836 RIPK4P57078 832 aa16.31■□□□□ 0.2
SCN3B-204ENST00000527836 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
SCN3B-204ENST00000527836 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
SCN3B-204ENST00000527836 SBF1O95248 1867 aa16.31■□□□□ 0.2
SCN3B-204ENST00000527836 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
SCN3B-204ENST00000527836 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
SCN3B-204ENST00000527836 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
SCN3B-204ENST00000527836 C16orf71Q8IYS4 520 aaPredicted RBP16.3■□□□□ 0.2
SCN3B-204ENST00000527836 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
SCN3B-204ENST00000527836 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
SCN3B-204ENST00000527836 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCN3B-204ENST00000527836 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms